Wall clock time and date at job start Tue Mar 9 2021 13:10:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52998 * 109.46823 * 2 1 4 4 C 1.53004 * 109.46854 * 240.00589 * 2 1 3 5 5 O 1.45194 * 109.47199 * 120.00432 * 2 1 3 6 6 C 1.34635 * 117.00104 * 59.99976 * 5 2 1 7 7 O 1.21505 * 119.99907 * 359.97438 * 6 5 2 8 8 N 1.34777 * 119.99769 * 180.02562 * 6 5 2 9 9 C 1.46505 * 119.99875 * 179.97438 * 8 6 5 10 10 H 1.08998 * 112.84770 * 23.80350 * 9 8 6 11 11 C 1.53782 * 113.61362 * 154.99732 * 9 8 6 12 12 C 1.53775 * 87.08028 * 140.06787 * 11 9 8 13 13 H 1.08999 * 113.61828 * 89.20079 * 12 11 9 14 14 C 1.50709 * 113.61349 * 220.02253 * 12 11 9 15 15 O 1.21279 * 119.99904 * 359.97438 * 14 12 11 16 16 N 1.34773 * 119.99896 * 180.02562 * 14 12 11 17 17 N 1.40104 * 119.99982 * 179.97438 * 16 14 12 18 18 C 1.34772 * 119.99978 * 179.97438 * 17 16 14 19 19 O 1.21569 * 120.00433 * 359.97438 * 18 17 16 20 20 C 1.47723 * 119.99915 * 179.97438 * 18 17 16 21 21 C 1.39635 * 120.11934 * 180.02562 * 20 18 17 22 22 C 1.37860 * 119.87850 * 180.27891 * 21 20 18 23 23 C 1.50699 * 119.93589 * 179.74512 * 22 21 20 24 24 O 1.42901 * 109.47611 * 14.99978 * 23 22 21 25 25 Si 1.86309 * 109.46805 * 134.99885 * 23 22 21 26 26 C 1.38631 * 120.12038 * 359.47025 * 22 21 20 27 27 F 1.35095 * 119.88133 * 180.28006 * 26 22 21 28 28 C 1.38683 * 120.23380 * 0.55577 * 26 22 21 29 29 C 1.37810 * 120.12110 * 359.70027 * 28 26 22 30 30 C 1.53777 * 113.69044 * 252.53289 * 9 8 6 31 31 H 1.09004 * 109.47006 * 299.99866 * 1 2 3 32 32 H 1.09003 * 109.47413 * 59.99421 * 1 2 3 33 33 H 1.08994 * 109.47270 * 179.97438 * 1 2 3 34 34 H 1.09006 * 109.47102 * 179.97438 * 3 2 1 35 35 H 1.08993 * 109.47691 * 299.99894 * 3 2 1 36 36 H 1.09004 * 109.47221 * 60.00265 * 3 2 1 37 37 H 1.09006 * 109.46735 * 299.99502 * 4 2 1 38 38 H 1.08998 * 109.47582 * 59.99707 * 4 2 1 39 39 H 1.08998 * 109.46838 * 179.97438 * 4 2 1 40 40 H 0.97006 * 120.00391 * 359.97438 * 8 6 5 41 41 H 1.09000 * 113.61540 * 25.51666 * 11 9 8 42 42 H 1.09001 * 113.68664 * 254.62663 * 11 9 8 43 43 H 0.97005 * 119.99944 * 359.97438 * 16 14 12 44 44 H 0.96995 * 119.99487 * 359.97438 * 17 16 14 45 45 H 1.08002 * 120.05631 * 359.97438 * 21 20 18 46 46 H 1.09003 * 109.47282 * 254.99348 * 23 22 21 47 47 H 0.96702 * 113.99679 * 59.99478 * 24 23 22 48 48 H 1.48499 * 109.99931 * 58.68041 * 25 23 22 49 49 H 1.48501 * 109.99759 * 179.97438 * 25 23 22 50 50 H 1.08003 * 119.93590 * 179.72953 * 28 26 22 51 51 H 1.08003 * 120.05569 * 180.02562 * 29 28 26 52 52 H 1.09002 * 113.61562 * 105.45898 * 30 9 8 53 53 H 1.08998 * 113.61757 * 334.55538 * 30 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0399 -0.7211 -1.2494 5 8 2.0140 -0.6845 1.1855 6 6 1.6523 -1.9724 1.3382 7 8 0.9509 -2.5094 0.5039 8 7 2.0673 -2.6655 2.4170 9 6 1.6732 -4.0667 2.5834 10 1 1.4209 -4.5503 1.6398 11 6 2.6461 -4.8812 3.4523 12 6 1.4086 -5.5554 4.0675 13 1 1.0847 -6.4469 3.5304 14 6 1.5173 -5.7751 5.5545 15 8 2.5170 -5.4283 6.1472 16 7 0.5042 -6.3580 6.2254 17 7 0.6055 -6.5628 7.6077 18 6 -0.4079 -7.1451 8.2787 19 8 -1.4101 -7.4924 7.6847 20 6 -0.3008 -7.3616 9.7360 21 6 -1.3490 -7.9652 10.4337 22 6 -1.2462 -8.1595 11.7946 23 6 -2.3790 -8.8056 12.5497 24 8 -3.2707 -9.4332 11.6260 25 14 -1.6958 -10.0845 13.7197 26 6 -0.1003 -7.7669 12.4688 27 9 -0.0023 -7.9648 13.8016 28 6 0.9435 -7.1665 11.7809 29 6 0.8490 -6.9627 10.4212 30 6 0.6262 -4.2870 3.6879 31 1 -0.3633 0.5138 0.8900 32 1 -0.3634 0.5139 -0.8899 33 1 -0.3633 -1.0276 -0.0005 34 1 3.1300 1.4426 0.0005 35 1 1.6767 1.9564 -0.8899 36 1 1.6766 1.9563 0.8900 37 1 1.6766 -1.7489 -1.2493 38 1 1.6766 -0.2073 -2.1393 39 1 3.1299 -0.7207 -1.2496 40 1 2.6269 -2.2366 3.0832 41 1 3.2108 -4.2752 4.1608 42 1 3.2767 -5.5632 2.8819 43 1 -0.2952 -6.6357 5.7512 44 1 1.4050 -6.2854 8.0816 45 1 -2.2407 -8.2748 9.9088 46 1 -2.9180 -8.0462 13.1162 47 1 -2.8578 -10.1216 11.0868 48 1 -0.7427 -9.4501 14.6653 49 1 -2.8031 -10.7287 14.4709 50 1 1.8323 -6.8585 12.3116 51 1 1.6627 -6.4953 9.8864 52 1 -0.3748 -4.4891 3.3067 53 1 0.6386 -3.5187 4.4609 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14472184_12496548.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:49 Heat of formation + Delta-G solvation = -127.003078 kcal Electronic energy + Delta-G solvation = -38016.974780 eV Core-core repulsion = 32579.857571 eV Total energy + Delta-G solvation = -5437.117209 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.178 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -50.45710 -42.10681 -41.75934 -41.12477 -39.92228 -39.17219 -37.78383 -37.72605 -36.54846 -35.37047 -34.17214 -33.49276 -32.40653 -31.48687 -28.36527 -28.30831 -27.55939 -27.01687 -26.77100 -25.11730 -23.80521 -23.34188 -22.53194 -21.88323 -21.34897 -20.54141 -19.53510 -19.27278 -19.03320 -18.87231 -18.34494 -17.74401 -17.64559 -17.33653 -17.19115 -17.13918 -16.81888 -16.54376 -16.31413 -16.05996 -15.82062 -15.70703 -15.47679 -15.43210 -15.27400 -15.16157 -14.86060 -14.77774 -14.37974 -14.13122 -13.81940 -13.75207 -13.53532 -13.47422 -13.37406 -13.10572 -12.92310 -12.86916 -12.83694 -12.59184 -12.55954 -12.45430 -12.37921 -12.32682 -12.18904 -11.77587 -11.62122 -11.39470 -11.39214 -11.12993 -11.09132 -10.94323 -10.18296 -10.15423 -9.83989 -9.52430 -5.03824 -0.60742 -0.01750 0.60816 1.13307 1.19561 1.26504 1.57036 1.61920 1.73392 1.95427 2.49105 2.74661 2.94975 3.12548 3.21609 3.24923 3.31969 3.37062 3.45980 3.64512 3.68413 3.74083 3.79415 3.80089 3.91704 3.94300 4.02443 4.04970 4.33678 4.43686 4.49188 4.57028 4.61264 4.62500 4.69480 4.74480 4.76447 4.76463 4.84772 4.85501 4.87317 4.87662 4.97032 4.98319 4.98679 5.01772 5.15405 5.27180 5.30502 5.40421 5.46100 5.50787 5.58579 5.62001 6.31422 6.38318 6.62682 6.66686 7.14621 7.32747 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.128 3.872 3 C -0.139 4.139 4 C -0.180 4.180 5 O -0.372 6.372 6 C 0.644 3.356 7 O -0.591 6.591 8 N -0.692 5.692 9 C 0.139 3.861 10 H 0.122 0.878 11 C -0.114 4.114 12 C -0.115 4.115 13 H 0.156 0.844 14 C 0.531 3.469 15 O -0.565 6.565 16 N -0.517 5.517 17 N -0.516 5.516 18 C 0.567 3.433 19 O -0.561 6.561 20 C -0.142 4.142 21 C -0.018 4.018 22 C -0.155 4.155 23 C -0.068 4.068 24 O -0.550 6.550 25 Si 0.760 3.240 26 C 0.111 3.889 27 F -0.129 7.129 28 C -0.144 4.144 29 C -0.047 4.047 30 C -0.134 4.134 31 H 0.060 0.940 32 H 0.086 0.914 33 H 0.066 0.934 34 H 0.069 0.931 35 H 0.098 0.902 36 H 0.068 0.932 37 H 0.066 0.934 38 H 0.086 0.914 39 H 0.061 0.939 40 H 0.416 0.584 41 H 0.097 0.903 42 H 0.099 0.901 43 H 0.440 0.560 44 H 0.438 0.562 45 H 0.152 0.848 46 H 0.117 0.883 47 H 0.398 0.602 48 H -0.257 1.257 49 H -0.305 1.305 50 H 0.170 0.830 51 H 0.165 0.835 52 H 0.096 0.904 53 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.418 0.027 -1.501 4.666 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.398 3.602 7 O -0.482 6.482 8 N -0.350 5.350 9 C 0.035 3.965 10 H 0.140 0.860 11 C -0.153 4.153 12 C -0.138 4.138 13 H 0.173 0.827 14 C 0.319 3.681 15 O -0.442 6.442 16 N -0.266 5.266 17 N -0.265 5.265 18 C 0.355 3.645 19 O -0.439 6.439 20 C -0.147 4.147 21 C -0.037 4.037 22 C -0.156 4.156 23 C -0.178 4.178 24 O -0.358 6.358 25 Si 0.664 3.336 26 C 0.092 3.908 27 F -0.107 7.107 28 C -0.163 4.163 29 C -0.065 4.065 30 C -0.173 4.173 31 H 0.079 0.921 32 H 0.105 0.895 33 H 0.085 0.915 34 H 0.088 0.912 35 H 0.117 0.883 36 H 0.087 0.913 37 H 0.085 0.915 38 H 0.105 0.895 39 H 0.080 0.920 40 H 0.252 0.748 41 H 0.116 0.884 42 H 0.118 0.882 43 H 0.283 0.717 44 H 0.283 0.717 45 H 0.169 0.831 46 H 0.134 0.866 47 H 0.248 0.752 48 H -0.182 1.182 49 H -0.233 1.233 50 H 0.188 0.812 51 H 0.182 0.818 52 H 0.115 0.885 53 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 3.762 0.013 -0.851 3.857 hybrid contribution -0.260 0.735 0.633 1.004 sum 3.502 0.748 -0.218 3.587 Atomic orbital electron populations 1.22474 0.94005 1.03807 1.03429 1.22338 0.94465 0.92511 0.81562 1.21898 1.02452 0.91055 1.04184 1.22477 1.01633 1.02353 0.97265 1.86316 1.71557 1.23482 1.47265 1.18398 0.78624 0.80748 0.82440 1.90899 1.42081 1.70858 1.44318 1.44772 1.54945 1.12347 1.22970 1.22565 0.96030 0.78722 0.99208 0.86034 1.23281 0.95776 0.98429 0.97817 1.22569 1.00886 1.01511 0.88810 0.82687 1.21128 0.81170 0.75711 0.90129 1.90735 1.31231 1.51982 1.70260 1.45134 1.22416 1.62621 0.96381 1.44768 1.21647 1.62246 0.97805 1.18365 0.81811 0.77064 0.87239 1.90834 1.30951 1.52331 1.69783 1.19567 0.97520 1.06466 0.91134 1.20878 0.97977 0.93017 0.91861 1.20273 0.95910 1.04305 0.95141 1.25039 0.92131 1.02477 0.98149 1.86486 1.38040 1.56438 1.54803 0.94400 0.79616 0.80078 0.79498 1.18018 0.95450 0.99782 0.77592 1.91570 1.96200 1.92070 1.30901 1.21360 0.99475 1.00560 0.94858 1.21448 0.96292 0.95121 0.93647 1.23493 0.99907 0.95475 0.98436 0.92079 0.89536 0.91545 0.91215 0.88340 0.91299 0.91541 0.89531 0.91970 0.74753 0.88449 0.88215 0.71651 0.71742 0.83057 0.86622 0.75174 1.18228 1.23287 0.81221 0.81774 0.88549 0.89374 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.46 8.37 71.98 0.60 0.14 16 2 C 0.13 0.30 1.13 -10.79 -0.01 0.29 16 3 C -0.14 0.31 8.85 71.98 0.64 0.95 16 4 C -0.18 -0.44 8.37 71.98 0.60 0.16 16 5 O -0.37 -1.79 9.94 -55.44 -0.55 -2.34 16 6 C 0.64 3.36 8.06 129.79 1.05 4.41 16 7 O -0.59 -5.80 11.48 19.83 0.23 -5.57 16 8 N -0.69 0.76 5.36 -567.61 -3.04 -2.28 16 9 C 0.14 -0.60 4.24 45.52 0.19 -0.41 16 10 H 0.12 -0.35 7.46 -2.39 -0.02 -0.36 16 11 C -0.11 0.75 7.16 31.12 0.22 0.97 16 12 C -0.11 0.90 4.15 -11.01 -0.05 0.85 16 13 H 0.16 -2.01 8.14 -2.39 -0.02 -2.03 16 14 C 0.53 -1.31 7.47 87.66 0.65 -0.66 16 15 O -0.57 -2.12 15.74 -3.03 -0.05 -2.17 16 16 N -0.52 1.52 6.26 -173.53 -1.09 0.43 16 17 N -0.52 1.13 6.21 -175.69 -1.09 0.04 16 18 C 0.57 0.43 7.89 86.75 0.68 1.12 16 19 O -0.56 -3.96 16.18 -3.93 -0.06 -4.02 16 20 C -0.14 0.31 5.87 -20.09 -0.12 0.20 16 21 C -0.02 0.02 8.78 22.52 0.20 0.22 16 22 C -0.15 0.20 5.13 -19.86 -0.10 0.10 16 23 C -0.07 0.04 2.97 71.24 0.21 0.25 16 24 O -0.55 0.18 11.64 -148.98 -1.73 -1.56 16 25 Si 0.76 -0.81 30.80 68.60 2.11 1.30 16 26 C 0.11 -0.17 6.67 22.47 0.15 -0.02 16 27 F -0.13 -0.23 12.79 44.97 0.58 0.34 16 28 C -0.14 0.82 10.01 22.27 0.22 1.04 16 29 C -0.05 0.31 9.54 22.51 0.21 0.53 16 30 C -0.13 0.85 7.43 31.12 0.23 1.08 16 31 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 32 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 33 H 0.07 0.49 5.88 -2.39 -0.01 0.48 16 34 H 0.07 -0.17 8.14 -2.38 -0.02 -0.18 16 35 H 0.10 -0.54 8.14 -2.39 -0.02 -0.56 16 36 H 0.07 -0.16 8.14 -2.39 -0.02 -0.17 16 37 H 0.07 0.48 5.88 -2.38 -0.01 0.47 16 38 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 39 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 40 H 0.42 -1.78 8.84 -92.70 -0.82 -2.60 16 41 H 0.10 -0.41 7.41 -2.39 -0.02 -0.43 16 42 H 0.10 -0.81 8.14 -2.39 -0.02 -0.83 16 43 H 0.44 -2.11 8.00 -213.31 -1.71 -3.82 16 44 H 0.44 -2.19 6.03 -213.32 -1.29 -3.48 16 45 H 0.15 0.04 6.66 -2.91 -0.02 0.02 16 46 H 0.12 0.08 7.96 -2.39 -0.02 0.06 16 47 H 0.40 -3.34 8.43 -74.06 -0.62 -3.96 16 48 H -0.26 -0.88 5.26 99.48 0.52 -0.36 16 49 H -0.30 -2.02 7.11 99.48 0.71 -1.31 16 50 H 0.17 -1.69 8.06 -2.91 -0.02 -1.71 16 51 H 0.16 -2.00 6.40 -2.91 -0.02 -2.02 16 52 H 0.10 -0.70 8.14 -2.39 -0.02 -0.72 16 53 H 0.09 -0.41 8.09 -2.39 -0.02 -0.43 16 Total: 0.00 -25.87 437.37 -2.67 -28.54 By element: Atomic # 1 Polarization: -20.36 SS G_CDS: -3.56 Total: -23.93 kcal Atomic # 6 Polarization: 5.62 SS G_CDS: 5.59 Total: 11.21 kcal Atomic # 7 Polarization: 3.41 SS G_CDS: -5.22 Total: -1.81 kcal Atomic # 8 Polarization: -13.50 SS G_CDS: -2.17 Total: -15.67 kcal Atomic # 9 Polarization: -0.23 SS G_CDS: 0.58 Total: 0.34 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: 2.11 Total: 1.30 kcal Total: -25.87 -2.67 -28.54 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14472184_12496548.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.459 kcal (2) G-P(sol) polarization free energy of solvation -25.871 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.331 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.672 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.544 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.003 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds