Wall clock time and date at job start Tue Mar 9 2021 13:11:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.53003 * 109.47236 * 2 1 4 4 C 1.52997 * 109.47378 * 239.99847 * 2 1 3 5 5 O 1.45197 * 109.46907 * 119.99724 * 2 1 3 6 6 C 1.34635 * 117.00290 * 60.00454 * 5 2 1 7 7 O 1.21519 * 119.99887 * 359.97438 * 6 5 2 8 8 N 1.34770 * 120.00624 * 179.97438 * 6 5 2 9 9 C 1.46505 * 120.00382 * 179.97438 * 8 6 5 10 10 H 1.09000 * 112.84640 * 336.19456 * 9 8 6 11 11 C 1.53957 * 113.73959 * 107.40201 * 9 8 6 12 12 C 1.53778 * 87.01754 * 139.94630 * 11 9 8 13 13 H 1.09003 * 113.62290 * 89.22669 * 12 11 9 14 14 C 1.50702 * 113.61376 * 220.04621 * 12 11 9 15 15 O 1.21283 * 120.00252 * 99.13510 * 14 12 11 16 16 N 1.34782 * 119.99845 * 279.13472 * 14 12 11 17 17 N 1.40101 * 119.99933 * 179.97438 * 16 14 12 18 18 C 1.34773 * 119.99879 * 180.02562 * 17 16 14 19 19 O 1.21511 * 120.00224 * 359.97438 * 18 17 16 20 20 C 1.48176 * 119.99821 * 179.97438 * 18 17 16 21 21 N 1.32716 * 119.72283 * 359.97438 * 20 18 17 22 22 C 1.31520 * 121.63990 * 179.97438 * 21 20 18 23 23 C 1.38556 * 120.90690 * 359.97438 * 22 21 20 24 24 C 1.50696 * 120.32679 * 180.02562 * 23 22 21 25 25 O 1.42903 * 109.47131 * 119.99863 * 24 23 22 26 26 Si 1.86305 * 109.47185 * 0.02562 * 24 23 22 27 27 C 1.38624 * 119.35010 * 0.29959 * 23 22 21 28 28 C 1.38590 * 118.49101 * 359.45809 * 27 23 22 29 29 C 1.53776 * 87.17393 * 334.63577 * 12 11 9 30 30 H 1.09000 * 109.46974 * 299.99906 * 1 2 3 31 31 H 1.08994 * 109.47136 * 60.00010 * 1 2 3 32 32 H 1.08998 * 109.46965 * 180.02562 * 1 2 3 33 33 H 1.08998 * 109.47002 * 180.02562 * 3 2 1 34 34 H 1.09002 * 109.46722 * 299.99991 * 3 2 1 35 35 H 1.09006 * 109.46753 * 59.99896 * 3 2 1 36 36 H 1.09001 * 109.47211 * 300.00269 * 4 2 1 37 37 H 1.09002 * 109.47077 * 59.99705 * 4 2 1 38 38 H 1.08998 * 109.47603 * 180.02562 * 4 2 1 39 39 H 0.97004 * 120.00203 * 359.97438 * 8 6 5 40 40 H 1.08991 * 113.61790 * 25.42285 * 11 9 8 41 41 H 1.09005 * 113.66206 * 254.46687 * 11 9 8 42 42 H 0.96998 * 120.00197 * 359.97438 * 16 14 12 43 43 H 1.08001 * 119.54789 * 180.02562 * 22 21 20 44 44 H 1.08999 * 109.47358 * 240.00223 * 24 23 22 45 45 H 0.96700 * 114.00311 * 300.00591 * 25 24 23 46 46 H 1.48499 * 109.99670 * 58.67633 * 26 24 23 47 47 H 1.48497 * 110.00233 * 179.97438 * 26 24 23 48 48 H 1.08002 * 120.75676 * 179.72298 * 27 23 22 49 49 H 1.07995 * 120.47427 * 180.26708 * 28 27 23 50 50 H 1.08997 * 113.61725 * 139.94229 * 29 12 11 51 51 H 1.09000 * 113.61554 * 270.84497 * 29 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0401 -0.7213 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6523 -1.9722 1.3384 7 8 0.9510 -2.5095 0.5040 8 7 2.0680 -2.6656 2.4167 9 6 1.6740 -4.0668 2.5832 10 1 0.7592 -4.3160 2.0455 11 6 2.8203 -5.0659 2.3424 12 6 2.2716 -5.8607 3.5390 13 1 1.5201 -6.6009 3.2641 14 6 3.3458 -6.4223 4.4344 15 8 3.6418 -5.8474 5.4605 16 7 3.9776 -7.5634 4.0949 17 7 4.9767 -8.0852 4.9271 18 6 5.6089 -9.2259 4.5873 19 8 5.3120 -9.8021 3.5595 20 6 6.6659 -9.7775 5.4671 21 7 6.9861 -9.1433 6.5882 22 6 7.9177 -9.5993 7.3968 23 6 8.6035 -10.7675 7.1055 24 6 9.6682 -11.2784 8.0416 25 8 9.3082 -12.5807 8.5071 26 14 9.8252 -10.1221 9.4939 27 6 8.3046 -11.4586 5.9416 28 6 7.3148 -10.9577 5.1109 29 6 1.6756 -4.5374 4.0473 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5138 -0.8899 32 1 -0.3633 -1.0277 0.0005 33 1 3.1301 1.4425 -0.0005 34 1 1.6767 1.9563 -0.8900 35 1 1.6767 1.9563 0.8900 36 1 1.6767 -1.7489 -1.2492 37 1 1.6767 -0.2075 -2.1392 38 1 3.1301 -0.7217 -1.2490 39 1 2.6282 -2.2370 3.0826 40 1 3.8104 -4.6444 2.5153 41 1 2.7452 -5.5976 1.3938 42 1 3.7407 -8.0234 3.2745 43 1 8.1509 -9.0562 8.3007 44 1 10.6207 -11.3314 7.5143 45 1 8.4690 -12.6090 8.9867 46 1 8.5243 -10.0170 10.2023 47 1 10.8716 -10.6151 10.4250 48 1 8.8281 -12.3691 5.6900 49 1 7.0531 -11.4726 4.1984 50 1 0.6778 -4.6429 4.4731 51 1 2.3522 -3.9710 4.6872 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14472184_13287726.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:37 Heat of formation + Delta-G solvation = -160.658828 kcal Electronic energy + Delta-G solvation = -34975.982648 eV Core-core repulsion = 29955.089820 eV Total energy + Delta-G solvation = -5020.892828 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.175 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -41.91366 -41.33846 -40.92896 -39.11580 -38.56946 -37.78668 -37.54572 -35.32387 -34.82145 -34.03649 -33.63195 -32.64019 -30.28897 -28.33001 -28.26771 -27.62317 -26.72825 -26.53809 -24.71276 -23.88682 -23.23478 -21.67462 -21.24719 -20.64791 -20.34498 -19.11617 -18.69189 -18.49971 -17.74744 -17.44118 -17.17677 -17.08368 -16.63018 -16.36882 -16.31448 -16.22420 -15.95925 -15.63869 -15.45433 -15.32950 -15.25283 -14.98850 -14.65185 -14.28217 -14.27324 -14.07122 -13.88883 -13.63786 -13.47094 -13.32873 -13.29881 -13.04138 -12.88124 -12.83543 -12.52026 -12.50141 -12.41251 -12.21996 -12.10976 -12.01697 -11.64305 -11.36178 -11.19917 -11.08878 -11.07555 -10.91480 -10.57799 -10.51810 -10.30082 -10.13441 -10.02794 -9.42914 -7.65535 -4.84771 -0.20069 0.33909 1.18139 1.32905 1.67142 1.73936 1.87721 1.94918 2.45753 2.48516 3.18079 3.30550 3.37407 3.41187 3.45392 3.52694 3.68473 3.76920 3.77544 3.78301 3.83638 3.90365 3.93081 3.97966 4.19700 4.31271 4.45475 4.47183 4.60159 4.60453 4.64844 4.65905 4.73248 4.76484 4.78877 4.79657 4.87689 4.88108 4.90826 4.99050 5.01919 5.06527 5.10716 5.19033 5.31606 5.35720 5.48417 5.59684 5.61670 6.00838 6.41859 6.47087 6.92470 7.04949 7.19120 7.34410 7.72297 8.62092 Molecular weight = 392.17amu Principal moments of inertia in cm(-1) A = 0.017804 B = 0.001232 C = 0.001209 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1572.337935 B =22719.801217 C =23163.272415 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.123 3.877 3 C -0.136 4.136 4 C -0.181 4.181 5 O -0.371 6.371 6 C 0.648 3.352 7 O -0.590 6.590 8 N -0.692 5.692 9 C 0.157 3.843 10 H 0.131 0.869 11 C -0.133 4.133 12 C -0.124 4.124 13 H 0.136 0.864 14 C 0.512 3.488 15 O -0.595 6.595 16 N -0.551 5.551 17 N -0.497 5.497 18 C 0.403 3.597 19 O -0.717 6.717 20 C 0.119 3.881 21 N -0.473 5.473 22 C 0.088 3.912 23 C -0.165 4.165 24 C -0.069 4.069 25 O -0.542 6.542 26 Si 0.760 3.240 27 C -0.046 4.046 28 C -0.145 4.145 29 C -0.108 4.108 30 H 0.062 0.938 31 H 0.091 0.909 32 H 0.063 0.937 33 H 0.066 0.934 34 H 0.103 0.897 35 H 0.070 0.930 36 H 0.062 0.938 37 H 0.092 0.908 38 H 0.058 0.942 39 H 0.415 0.585 40 H 0.074 0.926 41 H 0.089 0.911 42 H 0.364 0.636 43 H 0.175 0.825 44 H 0.141 0.859 45 H 0.386 0.614 46 H -0.292 1.292 47 H -0.273 1.273 48 H 0.169 0.831 49 H 0.133 0.867 50 H 0.102 0.898 51 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.095 11.514 -3.050 11.912 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.087 3.913 3 C -0.193 4.193 4 C -0.238 4.238 5 O -0.286 6.286 6 C 0.402 3.598 7 O -0.481 6.481 8 N -0.350 5.350 9 C 0.053 3.947 10 H 0.149 0.851 11 C -0.172 4.172 12 C -0.147 4.147 13 H 0.154 0.846 14 C 0.299 3.701 15 O -0.477 6.477 16 N -0.286 5.286 17 N -0.368 5.368 18 C 0.180 3.820 19 O -0.615 6.615 20 C -0.020 4.020 21 N -0.184 5.184 22 C -0.072 4.072 23 C -0.168 4.168 24 C -0.178 4.178 25 O -0.349 6.349 26 Si 0.664 3.336 27 C -0.072 4.072 28 C -0.167 4.167 29 C -0.146 4.146 30 H 0.081 0.919 31 H 0.110 0.890 32 H 0.082 0.918 33 H 0.085 0.915 34 H 0.121 0.879 35 H 0.089 0.911 36 H 0.081 0.919 37 H 0.110 0.890 38 H 0.077 0.923 39 H 0.251 0.749 40 H 0.093 0.907 41 H 0.108 0.892 42 H 0.199 0.801 43 H 0.192 0.808 44 H 0.158 0.842 45 H 0.235 0.765 46 H -0.219 1.219 47 H -0.199 1.199 48 H 0.186 0.814 49 H 0.151 0.849 50 H 0.121 0.879 51 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -0.307 12.621 -2.006 12.784 hybrid contribution -0.400 -2.596 -0.945 2.791 sum -0.707 10.026 -2.951 10.475 Atomic orbital electron populations 1.22466 0.93703 1.03779 1.03632 1.22434 0.94805 0.92670 0.81407 1.21890 1.02315 0.90720 1.04384 1.22480 1.01465 1.02309 0.97526 1.86325 1.71632 1.23131 1.47481 1.18278 0.78520 0.80757 0.82286 1.90882 1.42295 1.71019 1.43909 1.44792 1.54711 1.12118 1.23398 1.22447 0.98231 0.76965 0.97059 0.85139 1.23435 0.99270 0.96962 0.97576 1.22550 0.96931 0.98514 0.96741 0.84634 1.20700 0.83217 0.79356 0.86859 1.90519 1.67997 1.60794 1.28372 1.46313 1.35764 1.23961 1.22563 1.77847 1.15929 1.20673 1.22309 1.20036 0.87653 0.87812 0.86498 1.90407 1.72906 1.67751 1.30442 1.21256 0.95691 0.92922 0.92092 1.67780 1.14308 1.32789 1.03477 1.23140 0.91513 0.94027 0.98477 1.21644 1.00407 0.96803 0.97962 1.25160 0.97960 0.90956 1.03740 1.86529 1.44863 1.27824 1.75709 0.93782 0.78964 0.85593 0.75297 1.21619 0.94244 0.99484 0.91837 1.22149 0.97062 0.95906 1.01574 1.23164 1.02824 0.93180 0.95447 0.91876 0.89046 0.91843 0.91479 0.87856 0.91122 0.91944 0.88968 0.92330 0.74884 0.90726 0.89233 0.80090 0.80811 0.84154 0.76509 1.21856 1.19943 0.81394 0.84929 0.87934 0.89268 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -3.09 8.37 71.98 0.60 -2.49 16 2 C 0.12 2.25 1.13 -10.79 -0.01 2.24 16 3 C -0.14 -1.64 8.85 71.98 0.64 -1.00 16 4 C -0.18 -3.36 8.37 71.98 0.60 -2.75 16 5 O -0.37 -8.62 9.94 -55.44 -0.55 -9.17 16 6 C 0.65 16.81 8.06 129.79 1.05 17.86 16 7 O -0.59 -17.50 11.48 19.78 0.23 -17.27 16 8 N -0.69 -16.22 5.37 -567.32 -3.04 -19.26 16 9 C 0.16 3.76 4.24 45.58 0.19 3.95 16 10 H 0.13 2.98 7.46 -2.39 -0.02 2.96 16 11 C -0.13 -3.79 7.45 31.18 0.23 -3.56 16 12 C -0.12 -3.97 4.14 -11.02 -0.05 -4.02 16 13 H 0.14 3.64 8.14 -2.39 -0.02 3.62 16 14 C 0.51 24.37 7.47 87.66 0.65 25.02 16 15 O -0.60 -32.93 16.25 -3.04 -0.05 -32.98 16 16 N -0.55 -29.89 6.26 -173.52 -1.09 -30.98 16 17 N -0.50 -31.03 11.05 -175.38 -1.94 -32.97 16 18 C 0.40 24.60 7.93 86.88 0.69 25.29 16 19 O -0.72 -45.83 16.16 -3.75 -0.06 -45.89 16 20 C 0.12 6.12 6.75 41.91 0.28 6.40 16 21 N -0.47 -22.65 10.06 -184.91 -1.86 -24.51 16 22 C 0.09 3.07 9.84 84.82 0.83 3.91 16 23 C -0.17 -4.70 5.40 -19.70 -0.11 -4.81 16 24 C -0.07 -1.39 2.83 71.23 0.20 -1.19 16 25 O -0.54 -11.46 12.78 -148.98 -1.90 -13.37 16 26 Si 0.76 13.56 29.82 68.60 2.05 15.60 16 27 C -0.05 -1.44 9.77 22.45 0.22 -1.22 16 28 C -0.14 -6.06 9.63 22.61 0.22 -5.85 16 29 C -0.11 -2.83 7.15 31.12 0.22 -2.61 16 30 H 0.06 1.03 8.14 -2.39 -0.02 1.01 16 31 H 0.09 1.14 8.14 -2.39 -0.02 1.12 16 32 H 0.06 1.45 5.88 -2.39 -0.01 1.44 16 33 H 0.07 0.82 8.14 -2.39 -0.02 0.80 16 34 H 0.10 0.76 8.14 -2.39 -0.02 0.74 16 35 H 0.07 0.81 8.14 -2.38 -0.02 0.79 16 36 H 0.06 1.52 5.88 -2.39 -0.01 1.51 16 37 H 0.09 1.24 8.14 -2.39 -0.02 1.22 16 38 H 0.06 1.08 8.14 -2.39 -0.02 1.06 16 39 H 0.41 8.63 8.84 -92.71 -0.82 7.81 16 40 H 0.07 2.38 8.09 -2.39 -0.02 2.36 16 41 H 0.09 2.37 8.14 -2.38 -0.02 2.35 16 42 H 0.36 18.77 8.00 -213.32 -1.71 17.07 16 43 H 0.18 4.86 4.89 -2.91 -0.01 4.85 16 44 H 0.14 2.25 7.96 -2.39 -0.02 2.24 16 45 H 0.39 6.50 8.70 -74.06 -0.64 5.86 16 46 H -0.29 -6.97 7.11 99.48 0.71 -6.26 16 47 H -0.27 -5.64 7.11 99.48 0.71 -4.93 16 48 H 0.17 4.00 8.06 -2.91 -0.02 3.97 16 49 H 0.13 5.62 7.64 -2.91 -0.02 5.60 16 50 H 0.10 2.24 8.14 -2.39 -0.02 2.22 16 51 H 0.09 2.65 7.43 -2.39 -0.02 2.64 16 Total: -1.00 -89.72 431.01 -3.86 -93.58 By element: Atomic # 1 Polarization: 64.14 SS G_CDS: -2.11 Total: 62.03 kcal Atomic # 6 Polarization: 48.72 SS G_CDS: 6.47 Total: 55.19 kcal Atomic # 7 Polarization: -99.79 SS G_CDS: -7.93 Total: -107.72 kcal Atomic # 8 Polarization: -116.34 SS G_CDS: -2.34 Total: -118.68 kcal Atomic # 14 Polarization: 13.56 SS G_CDS: 2.05 Total: 15.60 kcal Total: -89.72 -3.86 -93.58 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14472184_13287726.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.077 kcal (2) G-P(sol) polarization free energy of solvation -89.721 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -156.798 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.861 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -93.581 kcal (6) G-S(sol) free energy of system = (1) + (5) -160.659 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds