Wall clock time and date at job start Tue Mar 9 2021 13:14:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.53001 * 109.46777 * 2 1 4 4 C 1.52996 * 109.47079 * 239.99874 * 2 1 3 5 5 O 1.45194 * 109.47298 * 119.99742 * 2 1 3 6 6 C 1.34639 * 117.00111 * 60.00324 * 5 2 1 7 7 O 1.21511 * 120.00061 * 359.97438 * 6 5 2 8 8 N 1.34773 * 120.00273 * 180.02562 * 6 5 2 9 9 C 1.46504 * 120.00093 * 179.97438 * 8 6 5 10 10 H 1.08994 * 112.90583 * 336.25031 * 9 8 6 11 11 C 1.53783 * 113.61233 * 107.49972 * 9 8 6 12 12 C 1.53784 * 87.07708 * 139.97979 * 11 9 8 13 13 H 1.09006 * 113.68919 * 89.13382 * 12 11 9 14 14 C 1.50699 * 113.61403 * 220.01453 * 12 11 9 15 15 O 1.21279 * 119.99668 * 97.50185 * 14 12 11 16 16 N 1.34772 * 120.00272 * 277.50035 * 14 12 11 17 17 N 1.40105 * 119.99935 * 179.97438 * 16 14 12 18 18 C 1.34779 * 119.99651 * 180.02562 * 17 16 14 19 19 O 1.21636 * 120.00404 * 0.02562 * 18 17 16 20 20 C 1.47197 * 119.99588 * 180.02562 * 18 17 16 21 21 C 1.36002 * 123.46272 * 0.02562 * 20 18 17 22 22 S 1.70448 * 110.81828 * 179.97438 * 21 20 18 23 23 C 1.75502 * 92.44474 * 0.02562 * 22 21 20 24 24 C 1.50693 * 124.71391 * 180.02562 * 23 22 21 25 25 O 1.42896 * 109.47261 * 119.97351 * 24 23 22 26 26 Si 1.86305 * 109.46971 * 359.97333 * 24 23 22 27 27 C 1.32771 * 110.57663 * 359.97438 * 23 22 21 28 28 C 1.53781 * 87.08352 * 334.56641 * 12 11 9 29 29 H 1.08994 * 109.47208 * 299.99956 * 1 2 3 30 30 H 1.08998 * 109.47348 * 60.00426 * 1 2 3 31 31 H 1.08999 * 109.46750 * 180.02562 * 1 2 3 32 32 H 1.09003 * 109.46825 * 180.02562 * 3 2 1 33 33 H 1.08998 * 109.46834 * 299.99889 * 3 2 1 34 34 H 1.08994 * 109.47215 * 60.00049 * 3 2 1 35 35 H 1.08996 * 109.47133 * 300.00076 * 4 2 1 36 36 H 1.09002 * 109.47418 * 60.00136 * 4 2 1 37 37 H 1.09003 * 109.47204 * 179.97438 * 4 2 1 38 38 H 0.96999 * 120.00154 * 359.97438 * 8 6 5 39 39 H 1.08998 * 113.61411 * 25.43331 * 11 9 8 40 40 H 1.08998 * 113.61723 * 254.52950 * 11 9 8 41 41 H 0.97001 * 120.00253 * 0.02562 * 16 14 12 42 42 H 0.96991 * 119.99996 * 0.02562 * 17 16 14 43 43 H 1.08000 * 124.58981 * 0.24393 * 21 20 18 44 44 H 1.09002 * 109.47324 * 239.97774 * 24 23 22 45 45 H 0.96704 * 114.00457 * 300.00176 * 25 24 23 46 46 H 1.48502 * 109.99885 * 58.68309 * 26 24 23 47 47 H 1.48504 * 110.00041 * 180.02562 * 26 24 23 48 48 H 1.07998 * 123.45977 * 180.02562 * 27 23 22 49 49 H 1.09000 * 113.61063 * 139.97580 * 28 12 11 50 50 H 1.08999 * 113.61374 * 270.87879 * 28 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0141 -0.6844 1.1855 6 6 1.6524 -1.9723 1.3384 7 8 0.9510 -2.5095 0.5041 8 7 2.0674 -2.6653 2.4172 9 6 1.6733 -4.0665 2.5837 10 1 0.7596 -4.3172 2.0449 11 6 2.8214 -5.0617 2.3460 12 6 2.2724 -5.8592 3.5407 13 1 1.5225 -6.6007 3.2649 14 6 3.3464 -6.4190 4.4375 15 8 3.6596 -5.8289 5.4497 16 7 3.9588 -7.5753 4.1148 17 7 4.9577 -8.0954 4.9483 18 6 5.5705 -9.2516 4.6252 19 8 5.2567 -9.8432 3.6098 20 6 6.6195 -9.7982 5.5012 21 6 7.0247 -9.1965 6.6516 22 16 8.2520 -10.1040 7.4102 23 6 8.2275 -11.3285 6.1531 24 6 9.1086 -12.5507 6.1284 25 8 8.2946 -13.7250 6.1370 26 14 10.2136 -12.5501 7.6285 27 6 7.3241 -11.0289 5.2274 28 6 1.6738 -4.5366 4.0479 29 1 -0.3633 0.5138 0.8899 30 1 -0.3634 0.5137 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 3.1300 1.4426 -0.0005 33 1 1.6766 1.9563 -0.8900 34 1 1.6766 1.9563 0.8899 35 1 1.6767 -1.7489 -1.2492 36 1 1.6767 -0.2075 -2.1392 37 1 3.1300 -0.7209 -1.2494 38 1 2.6269 -2.2364 3.0834 39 1 3.8101 -4.6376 2.5213 40 1 2.7497 -5.5924 1.3966 41 1 3.7086 -8.0472 3.3050 42 1 5.2082 -7.6235 5.7578 43 1 6.6203 -8.2713 7.0349 44 1 9.7206 -12.5393 5.2265 45 1 7.7224 -13.8014 6.9128 46 1 9.3913 -12.5334 8.8649 47 1 11.0881 -13.7502 7.6156 48 1 7.1354 -11.6425 4.3590 49 1 0.6756 -4.6436 4.4724 50 1 2.3488 -3.9692 4.6886 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14472184_6894386.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:14:27 Heat of formation + Delta-G solvation = -86.752719 kcal Electronic energy + Delta-G solvation = -33792.025481 eV Core-core repulsion = 28915.259881 eV Total energy + Delta-G solvation = -4876.765600 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.144 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -42.08293 -41.59131 -40.86009 -39.41875 -38.87072 -37.69983 -37.29801 -36.43158 -35.27933 -34.14722 -33.07441 -31.36547 -28.31921 -28.27985 -27.58657 -27.08993 -26.97262 -25.65337 -23.81526 -22.67931 -22.21666 -21.43840 -20.94233 -20.34100 -19.46441 -19.08033 -18.85221 -18.58452 -17.91711 -17.57069 -17.27162 -17.07483 -16.88754 -16.53599 -16.43009 -16.29742 -15.79451 -15.65713 -15.42461 -15.38228 -15.22462 -14.88620 -14.62895 -14.34159 -14.13007 -13.93124 -13.78780 -13.71054 -13.66883 -13.42035 -13.10465 -12.86177 -12.81871 -12.78355 -12.69147 -12.49723 -12.45710 -12.45593 -12.34393 -12.19940 -11.95857 -11.89993 -11.37188 -11.29049 -11.09601 -10.95937 -10.85757 -10.20378 -10.14635 -9.75530 -9.46242 -5.18380 -0.51835 0.21057 0.55685 0.61385 0.70872 1.11301 1.19222 1.30384 1.45031 1.81209 1.86405 2.15150 2.76976 3.08533 3.11241 3.16839 3.22343 3.40640 3.49993 3.53038 3.70972 3.76837 3.78652 3.84261 3.90956 3.98132 4.11823 4.26163 4.38576 4.43291 4.50818 4.56947 4.57054 4.62792 4.63974 4.69336 4.75737 4.79164 4.86153 4.90790 4.94006 4.96885 5.07613 5.09855 5.29167 5.37255 5.43608 5.47200 5.54690 5.60547 6.22971 6.30715 6.40631 6.68029 7.16196 7.41772 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.137 3.863 3 C -0.142 4.142 4 C -0.184 4.184 5 O -0.365 6.365 6 C 0.651 3.349 7 O -0.566 6.566 8 N -0.701 5.701 9 C 0.143 3.857 10 H 0.127 0.873 11 C -0.139 4.139 12 C -0.126 4.126 13 H 0.128 0.872 14 C 0.528 3.472 15 O -0.536 6.536 16 N -0.518 5.518 17 N -0.522 5.522 18 C 0.582 3.418 19 O -0.530 6.530 20 C -0.151 4.151 21 C -0.205 4.205 22 S 0.214 5.786 23 C -0.242 4.242 24 C -0.032 4.032 25 O -0.522 6.522 26 Si 0.650 3.350 27 C -0.050 4.050 28 C -0.120 4.120 29 H 0.060 0.940 30 H 0.072 0.928 31 H 0.087 0.913 32 H 0.067 0.933 33 H 0.082 0.918 34 H 0.067 0.933 35 H 0.087 0.913 36 H 0.072 0.928 37 H 0.060 0.940 38 H 0.408 0.592 39 H 0.094 0.906 40 H 0.090 0.910 41 H 0.435 0.565 42 H 0.431 0.569 43 H 0.174 0.826 44 H 0.129 0.871 45 H 0.378 0.622 46 H -0.238 1.238 47 H -0.233 1.233 48 H 0.159 0.841 49 H 0.089 0.911 50 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.277 2.695 2.675 4.428 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.100 3.900 3 C -0.199 4.199 4 C -0.241 4.241 5 O -0.279 6.279 6 C 0.405 3.595 7 O -0.455 6.455 8 N -0.359 5.359 9 C 0.038 3.962 10 H 0.145 0.855 11 C -0.178 4.178 12 C -0.149 4.149 13 H 0.146 0.854 14 C 0.315 3.685 15 O -0.411 6.411 16 N -0.266 5.266 17 N -0.270 5.270 18 C 0.368 3.632 19 O -0.406 6.406 20 C -0.171 4.171 21 C -0.343 4.343 22 S 0.481 5.519 23 C -0.359 4.359 24 C -0.145 4.145 25 O -0.328 6.328 26 Si 0.548 3.452 27 C -0.079 4.079 28 C -0.159 4.159 29 H 0.079 0.921 30 H 0.091 0.909 31 H 0.106 0.894 32 H 0.086 0.914 33 H 0.101 0.899 34 H 0.086 0.914 35 H 0.106 0.894 36 H 0.091 0.909 37 H 0.079 0.921 38 H 0.244 0.756 39 H 0.113 0.887 40 H 0.108 0.892 41 H 0.277 0.723 42 H 0.273 0.727 43 H 0.191 0.809 44 H 0.147 0.853 45 H 0.226 0.774 46 H -0.162 1.162 47 H -0.156 1.156 48 H 0.177 0.823 49 H 0.108 0.892 50 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 3.298 2.175 3.700 5.413 hybrid contribution -1.691 -0.416 -0.912 1.965 sum 1.607 1.759 2.789 3.668 Atomic orbital electron populations 1.22524 0.93825 1.05055 1.02733 1.22120 0.94453 0.91562 0.81849 1.21881 1.02341 0.92370 1.03348 1.22522 1.01606 1.03451 0.96545 1.86313 1.71451 1.23431 1.46735 1.18158 0.78564 0.80587 0.82211 1.90915 1.40943 1.70529 1.43089 1.44705 1.55408 1.12022 1.23798 1.22471 0.98811 0.77754 0.97121 0.85515 1.23548 1.00019 0.96759 0.97509 1.22503 0.97069 0.98242 0.97073 0.85382 1.20717 0.82390 0.78694 0.86721 1.90742 1.64831 1.59047 1.26455 1.44993 1.33410 1.24017 1.24208 1.44699 1.34015 1.23951 1.24337 1.17676 0.80995 0.78989 0.85548 1.90854 1.64622 1.59093 1.26019 1.19858 1.01836 0.98510 0.96908 1.25905 1.03294 1.05467 0.99681 1.83186 1.32596 1.13073 1.23070 1.24782 1.06528 1.03723 1.00871 1.24411 0.96115 0.81207 1.12719 1.86650 1.57437 1.40960 1.47784 0.95329 0.82917 0.90857 0.76095 1.20982 0.93411 0.93936 0.99556 1.23328 1.02967 0.93507 0.96073 0.92104 0.90926 0.89414 0.91397 0.89929 0.91377 0.89407 0.90933 0.92130 0.75613 0.88737 0.89176 0.72266 0.72672 0.80908 0.85308 0.77366 1.16224 1.15580 0.82341 0.89205 0.87612 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.22 8.37 37.16 0.31 0.10 16 2 C 0.14 0.16 1.13 -90.62 -0.10 0.06 16 3 C -0.14 0.10 8.85 37.16 0.33 0.43 16 4 C -0.18 -0.22 8.37 37.16 0.31 0.09 16 5 O -0.36 -0.83 9.94 -40.32 -0.40 -1.23 16 6 C 0.65 1.55 8.06 54.05 0.44 1.98 16 7 O -0.57 -2.53 11.48 -19.28 -0.22 -2.75 16 8 N -0.70 0.36 5.36 -57.93 -0.31 0.05 16 9 C 0.14 -0.26 4.24 -67.11 -0.28 -0.55 16 10 H 0.13 -0.15 7.46 -51.93 -0.39 -0.54 16 11 C -0.14 0.36 7.43 -25.92 -0.19 0.17 16 12 C -0.13 0.37 4.15 -90.96 -0.38 -0.01 16 13 H 0.13 -0.64 8.14 -51.93 -0.42 -1.06 16 14 C 0.53 -0.12 7.47 -10.99 -0.08 -0.20 16 15 O -0.54 -1.47 15.74 5.56 0.09 -1.39 16 16 N -0.52 0.16 6.26 31.22 0.20 0.35 16 17 N -0.52 -0.16 6.23 30.38 0.19 0.03 16 18 C 0.58 1.09 7.91 -12.62 -0.10 0.99 16 19 O -0.53 -2.62 16.63 5.25 0.09 -2.54 16 20 C -0.15 -0.05 5.98 -104.63 -0.63 -0.68 16 21 C -0.20 0.40 10.38 29.93 0.31 0.71 16 22 S 0.21 -0.52 20.18 -107.50 -2.17 -2.69 16 23 C -0.24 0.24 5.68 -36.18 -0.21 0.03 16 24 C -0.03 0.04 2.95 36.00 0.11 0.15 16 25 O -0.52 -0.14 12.85 -35.23 -0.45 -0.59 16 26 Si 0.65 -1.36 30.91 -169.99 -5.25 -6.61 16 27 C -0.05 -0.03 9.91 -39.02 -0.39 -0.42 16 28 C -0.12 0.31 7.16 -25.92 -0.19 0.12 16 29 H 0.06 0.06 8.14 -51.93 -0.42 -0.37 16 30 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 31 H 0.09 0.28 5.88 -51.93 -0.31 -0.03 16 32 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 33 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 34 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 35 H 0.09 0.28 5.88 -51.93 -0.31 -0.03 16 36 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 37 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 38 H 0.41 -0.85 8.84 -40.82 -0.36 -1.21 16 39 H 0.09 -0.18 8.09 -51.93 -0.42 -0.60 16 40 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 41 H 0.43 -0.54 8.00 -182.59 -1.46 -2.00 16 42 H 0.43 -0.41 6.50 -182.60 -1.19 -1.60 16 43 H 0.17 -0.74 7.01 -52.49 -0.37 -1.11 16 44 H 0.13 -0.27 7.96 -51.93 -0.41 -0.68 16 45 H 0.38 -1.00 8.70 45.56 0.40 -0.61 16 46 H -0.24 0.14 7.11 56.52 0.40 0.54 16 47 H -0.23 -0.20 7.11 56.52 0.40 0.20 16 48 H 0.16 0.22 8.06 -52.49 -0.42 -0.20 16 49 H 0.09 -0.28 8.14 -51.93 -0.42 -0.71 16 50 H 0.11 -0.17 7.41 -51.93 -0.38 -0.56 16 LS Contribution 429.04 15.07 6.47 6.47 Total: 0.00 -10.36 429.04 -11.57 -21.92 By element: Atomic # 1 Polarization: -4.98 SS G_CDS: -9.04 Total: -14.02 kcal Atomic # 6 Polarization: 3.73 SS G_CDS: -0.74 Total: 2.99 kcal Atomic # 7 Polarization: 0.36 SS G_CDS: 0.07 Total: 0.44 kcal Atomic # 8 Polarization: -7.59 SS G_CDS: -0.90 Total: -8.49 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.25 Total: -6.61 kcal Atomic # 16 Polarization: -0.52 SS G_CDS: -2.17 Total: -2.69 kcal Total LS contribution 6.47 Total: 6.47 kcal Total: -10.36 -11.57 -21.92 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14472184_6894386.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.831 kcal (2) G-P(sol) polarization free energy of solvation -10.355 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.186 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.567 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.922 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.753 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds