Wall clock time and date at job start Tue Mar 9 2021 13:15:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45191 * 1 3 3 C 1.34229 * 116.99820 * 2 1 4 4 O 1.20819 * 120.00088 * 359.97438 * 3 2 1 5 5 C 1.50700 * 119.99928 * 179.97438 * 3 2 1 6 6 H 1.09004 * 109.47531 * 59.99976 * 5 3 2 7 7 C 1.53005 * 109.47094 * 179.97438 * 5 3 2 8 8 C 1.53008 * 109.46849 * 179.97438 * 7 5 3 9 9 C 1.52999 * 109.47230 * 299.99932 * 8 7 5 10 10 H 1.09001 * 109.46669 * 180.02562 * 9 8 7 11 11 N 1.46502 * 109.47209 * 300.00081 * 9 8 7 12 12 C 1.34769 * 119.99960 * 204.99979 * 11 9 8 13 13 O 1.21722 * 120.00436 * 0.02562 * 12 11 9 14 14 C 1.46569 * 120.00244 * 180.02562 * 12 11 9 15 15 C 1.40857 * 126.58549 * 180.02562 * 14 12 11 16 16 C 1.40089 * 132.85900 * 0.28126 * 15 14 12 17 17 C 1.36450 * 119.24859 * 179.76939 * 16 15 14 18 18 C 1.50703 * 120.29416 * 179.97438 * 17 16 15 19 19 O 1.42901 * 109.46952 * 119.98366 * 18 17 16 20 20 Si 1.86302 * 109.47171 * 239.98055 * 18 17 16 21 21 C 1.40164 * 119.41303 * 359.92017 * 17 16 15 22 22 C 1.35182 * 120.31396 * 0.02577 * 21 17 16 23 23 N 1.36238 * 120.71065 * 0.02669 * 22 21 17 24 24 N 1.40016 * 132.01376 * 179.97438 * 23 22 21 25 25 C 1.30749 * 109.60417 * 179.97438 * 24 23 22 26 26 C 1.52995 * 109.47109 * 60.00384 * 9 8 7 27 27 C 1.52999 * 109.47302 * 300.00260 * 5 3 2 28 28 H 1.09002 * 109.47185 * 60.00142 * 1 2 3 29 29 H 1.09002 * 109.47033 * 179.97438 * 1 2 3 30 30 H 1.09004 * 109.47485 * 299.99950 * 1 2 3 31 31 H 1.08998 * 109.46867 * 60.00354 * 7 5 3 32 32 H 1.08995 * 109.47195 * 299.99973 * 7 5 3 33 33 H 1.09004 * 109.46541 * 180.02562 * 8 7 5 34 34 H 1.08998 * 109.47060 * 60.00518 * 8 7 5 35 35 H 0.97003 * 119.99707 * 25.00442 * 11 9 8 36 36 H 1.07998 * 120.37990 * 359.69094 * 16 15 14 37 37 H 1.08996 * 109.47206 * 359.97438 * 18 17 16 38 38 H 0.96696 * 114.00093 * 180.02562 * 19 18 17 39 39 H 1.48496 * 110.00089 * 299.99880 * 20 18 17 40 40 H 1.48496 * 110.00041 * 61.32498 * 20 18 17 41 41 H 1.07995 * 119.84373 * 180.02562 * 21 17 16 42 42 H 1.08004 * 119.64739 * 180.02562 * 22 21 17 43 43 H 1.08002 * 125.62696 * 179.97438 * 25 24 23 44 44 H 1.08998 * 109.47519 * 59.99485 * 26 9 8 45 45 H 1.08995 * 109.47156 * 179.97438 * 26 9 8 46 46 H 1.09007 * 109.46812 * 299.99559 * 27 5 3 47 47 H 1.08991 * 109.47452 * 59.99777 * 27 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5662 1.2749 0.0006 6 1 3.9564 0.7806 -0.8891 7 6 4.0000 2.7422 -0.0002 8 6 5.5280 2.8222 0.0011 9 6 6.0739 2.1296 1.2513 10 1 7.1624 2.1871 1.2523 11 7 5.5491 2.7947 2.4465 12 6 6.2294 2.7284 3.6080 13 8 7.2801 2.1163 3.6640 14 6 5.7041 3.3932 4.8040 15 6 6.2968 3.4139 6.0816 16 6 7.4792 2.8633 6.5926 17 6 7.7952 3.0634 7.9048 18 6 9.0611 2.4813 8.4793 19 8 9.8889 3.5361 8.9734 20 14 8.6345 1.3216 9.8735 21 6 6.9326 3.8161 8.7135 22 6 5.7973 4.3389 8.1986 23 7 5.4726 4.1438 6.8899 24 7 4.3801 4.5656 6.1225 25 6 4.5087 4.1265 4.8977 26 6 5.6402 0.6624 1.2520 27 6 4.1128 0.5816 1.2501 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3634 0.5138 0.8900 31 1 3.6099 3.2368 0.8893 32 1 3.6106 3.2357 -0.8906 33 1 5.8369 3.8675 0.0010 34 1 5.9184 2.3275 -0.8882 35 1 4.7120 3.2827 2.4019 36 1 8.1327 2.2859 5.9555 37 1 9.5947 1.9342 7.7021 38 1 10.7230 3.2341 9.3582 39 1 7.9065 2.0554 10.9397 40 1 7.8002 0.2028 9.3663 41 1 7.1761 3.9791 9.7530 42 1 5.1406 4.9175 8.8314 43 1 3.8125 4.3007 4.0906 44 1 6.0306 0.1676 0.3628 45 1 6.0295 0.1689 2.1425 46 1 3.7227 1.0759 2.1399 47 1 3.8038 -0.4636 1.2503 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14474850_11618758.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:02 Heat of formation + Delta-G solvation = -48.777188 kcal Electronic energy + Delta-G solvation = -32426.377133 eV Core-core repulsion = 27963.637318 eV Total energy + Delta-G solvation = -4462.739815 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -43.28998 -41.83129 -40.71415 -39.28922 -38.72276 -37.39914 -37.31869 -34.76226 -34.24983 -32.17452 -31.98453 -31.68620 -30.00322 -28.61923 -27.27880 -25.28930 -24.67838 -23.83390 -23.71736 -22.98113 -21.75994 -21.36189 -20.17701 -19.25957 -18.58277 -18.50855 -17.94358 -17.80579 -17.65486 -17.32757 -16.93599 -16.78919 -16.46402 -16.22508 -15.88538 -15.56576 -15.48295 -15.07597 -14.81558 -14.77409 -14.59070 -14.33045 -14.19400 -13.91498 -13.86665 -13.70345 -13.34853 -13.33130 -13.18119 -13.01997 -12.96558 -12.61361 -12.30327 -12.09094 -12.03683 -11.92810 -11.79304 -11.66485 -11.58074 -11.42746 -11.12898 -10.77921 -10.73586 -10.28534 -9.97647 -8.76516 -5.16517 -0.56965 -0.12692 1.00565 1.07080 1.13734 1.20641 1.52484 1.71305 1.85646 2.02572 2.29675 2.60896 2.97239 3.12918 3.41400 3.43513 3.54717 3.60379 3.61602 3.68386 3.84248 3.90850 3.98781 4.00736 4.10536 4.15513 4.17252 4.23901 4.24380 4.25199 4.32793 4.34961 4.36679 4.51581 4.57264 4.59753 4.70133 4.73025 4.94533 4.98227 4.99244 5.07661 5.08996 5.14245 5.17847 5.22802 5.26984 5.41792 5.61326 5.64812 6.31822 6.45449 6.63543 6.74826 7.42125 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.463 3.537 4 O -0.506 6.506 5 C -0.080 4.080 6 H 0.113 0.887 7 C -0.106 4.106 8 C -0.127 4.127 9 C 0.146 3.854 10 H 0.095 0.905 11 N -0.723 5.723 12 C 0.603 3.397 13 O -0.549 6.549 14 C -0.315 4.315 15 C 0.167 3.833 16 C -0.092 4.092 17 C -0.031 4.031 18 C -0.073 4.073 19 O -0.543 6.543 20 Si 0.703 3.297 21 C -0.146 4.146 22 C 0.113 3.887 23 N -0.265 5.265 24 N -0.311 5.311 25 C 0.119 3.881 26 C -0.129 4.129 27 C -0.110 4.110 28 H 0.064 0.936 29 H 0.103 0.897 30 H 0.063 0.937 31 H 0.070 0.930 32 H 0.079 0.921 33 H 0.079 0.921 34 H 0.085 0.915 35 H 0.397 0.603 36 H 0.165 0.835 37 H 0.082 0.918 38 H 0.387 0.613 39 H -0.249 1.249 40 H -0.256 1.256 41 H 0.162 0.838 42 H 0.178 0.822 43 H 0.198 0.802 44 H 0.078 0.922 45 H 0.077 0.923 46 H 0.068 0.932 47 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.685 -2.937 1.473 4.244 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.306 3.694 4 O -0.393 6.393 5 C -0.099 4.099 6 H 0.131 0.869 7 C -0.144 4.144 8 C -0.165 4.165 9 C 0.042 3.958 10 H 0.113 0.887 11 N -0.376 5.376 12 C 0.392 3.608 13 O -0.428 6.428 14 C -0.330 4.330 15 C 0.046 3.954 16 C -0.112 4.112 17 C -0.037 4.037 18 C -0.182 4.182 19 O -0.349 6.349 20 Si 0.602 3.398 21 C -0.167 4.167 22 C -0.012 4.012 23 N -0.029 5.029 24 N -0.132 5.132 25 C -0.062 4.062 26 C -0.168 4.168 27 C -0.147 4.147 28 H 0.082 0.918 29 H 0.121 0.879 30 H 0.082 0.918 31 H 0.088 0.912 32 H 0.098 0.902 33 H 0.098 0.902 34 H 0.103 0.897 35 H 0.232 0.768 36 H 0.183 0.817 37 H 0.101 0.899 38 H 0.236 0.764 39 H -0.173 1.173 40 H -0.180 1.180 41 H 0.179 0.821 42 H 0.195 0.805 43 H 0.214 0.786 44 H 0.097 0.903 45 H 0.096 0.904 46 H 0.086 0.914 47 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 1.192 -2.354 2.482 3.623 hybrid contribution -0.566 0.198 -1.083 1.238 sum 0.627 -2.156 1.398 2.645 Atomic orbital electron populations 1.23308 0.76034 1.03957 1.02665 1.86509 1.23644 1.33415 1.83865 1.23856 0.92098 0.81388 0.72093 1.90683 1.67231 1.36366 1.45035 1.21167 0.86818 0.99491 1.02431 0.86947 1.21461 0.95646 0.93390 1.03870 1.21869 0.94858 1.02076 0.97705 1.20964 0.99733 0.91503 0.83612 0.88705 1.45842 1.26412 1.55843 1.09473 1.16796 0.83343 0.78927 0.81733 1.90774 1.23076 1.43926 1.85041 1.19638 1.01127 1.18161 0.94029 1.19236 0.91773 0.93666 0.90701 1.20700 0.95134 1.00825 0.94529 1.19444 0.95777 0.95481 0.92952 1.24694 0.91481 0.96083 1.05953 1.86476 1.34403 1.32677 1.81374 0.95337 0.88210 0.78098 0.78184 1.20839 0.93380 1.00346 1.02149 1.21578 0.97943 1.00129 0.81584 1.46098 1.15784 1.32974 1.08085 1.77647 1.05054 1.26242 1.04212 1.24070 0.95264 0.92230 0.94668 1.21931 0.94715 0.96502 1.03614 1.21495 0.96285 1.01243 0.95707 0.91768 0.87901 0.91811 0.91158 0.90244 0.90243 0.89663 0.76789 0.81729 0.89949 0.76416 1.17287 1.18001 0.82082 0.80484 0.78560 0.90337 0.90448 0.91354 0.90281 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.55 101.05 1.07 1.05 16 2 O -0.36 -0.50 10.47 -39.25 -0.41 -0.91 16 3 C 0.46 0.76 7.26 36.01 0.26 1.02 16 4 O -0.51 -2.19 15.73 -18.74 -0.29 -2.49 16 5 C -0.08 0.09 2.63 -91.77 -0.24 -0.15 16 6 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 7 C -0.11 0.18 4.32 -26.72 -0.12 0.06 16 8 C -0.13 0.32 5.61 -26.73 -0.15 0.17 16 9 C 0.15 -0.12 2.78 -67.93 -0.19 -0.31 16 10 H 0.09 0.06 7.58 -51.93 -0.39 -0.33 16 11 N -0.72 -0.01 4.22 -55.15 -0.23 -0.25 16 12 C 0.60 1.94 7.75 -12.91 -0.10 1.84 16 13 O -0.55 -3.29 15.37 5.17 0.08 -3.21 16 14 C -0.31 -1.05 6.17 -104.67 -0.65 -1.70 16 15 C 0.17 0.68 6.76 -84.07 -0.57 0.11 16 16 C -0.09 -0.27 9.35 -39.53 -0.37 -0.64 16 17 C -0.03 -0.05 4.53 -104.54 -0.47 -0.52 16 18 C -0.07 0.09 2.81 36.01 0.10 0.19 16 19 O -0.54 0.68 12.76 -35.23 -0.45 0.23 16 20 Si 0.70 -1.60 31.97 -169.99 -5.43 -7.03 16 21 C -0.15 -0.10 8.67 -39.95 -0.35 -0.45 16 22 C 0.11 0.13 11.17 -16.68 -0.19 -0.06 16 23 N -0.27 -0.96 3.86 -10.55 -0.04 -1.00 16 24 N -0.31 -1.22 12.57 30.75 0.39 -0.83 16 25 C 0.12 0.23 11.44 -17.14 -0.20 0.03 16 26 C -0.13 0.14 5.60 -26.76 -0.15 -0.01 16 27 C -0.11 0.12 4.98 -26.75 -0.13 -0.01 16 28 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 29 H 0.10 -0.27 8.14 -51.93 -0.42 -0.70 16 30 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 31 H 0.07 -0.10 6.46 -51.93 -0.34 -0.43 16 32 H 0.08 -0.08 8.10 -51.93 -0.42 -0.50 16 33 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 34 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 35 H 0.40 -0.68 5.79 -40.82 -0.24 -0.91 16 36 H 0.17 0.46 7.01 -52.49 -0.37 0.09 16 37 H 0.08 -0.20 7.71 -51.93 -0.40 -0.60 16 38 H 0.39 -2.41 8.74 45.56 0.40 -2.01 16 39 H -0.25 0.00 7.07 56.52 0.40 0.39 16 40 H -0.26 -0.29 7.11 56.52 0.40 0.12 16 41 H 0.16 -0.19 7.52 -52.49 -0.39 -0.59 16 42 H 0.18 -0.31 8.06 -52.48 -0.42 -0.73 16 43 H 0.20 -0.40 7.46 -52.49 -0.39 -0.79 16 44 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 45 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 46 H 0.07 -0.02 7.60 -51.93 -0.39 -0.42 16 47 H 0.08 -0.08 8.11 -51.93 -0.42 -0.50 16 LS Contribution 388.76 15.07 5.86 5.86 Total: 0.00 -11.46 388.76 -9.34 -20.80 By element: Atomic # 1 Polarization: -5.45 SS G_CDS: -6.36 Total: -11.81 kcal Atomic # 6 Polarization: 3.08 SS G_CDS: -2.44 Total: 0.64 kcal Atomic # 7 Polarization: -2.19 SS G_CDS: 0.11 Total: -2.08 kcal Atomic # 8 Polarization: -5.31 SS G_CDS: -1.08 Total: -6.38 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.43 Total: -7.03 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -11.46 -9.34 -20.80 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14474850_11618758.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.978 kcal (2) G-P(sol) polarization free energy of solvation -11.464 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.441 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.336 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.799 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.777 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds