Wall clock time and date at job start Tue Mar 9 2021 13:15:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34228 * 117.00001 * 2 1 4 4 O 1.20826 * 120.00094 * 359.97438 * 3 2 1 5 5 C 1.50702 * 119.99603 * 180.02562 * 3 2 1 6 6 H 1.08994 * 109.47301 * 60.00009 * 5 3 2 7 7 C 1.53001 * 109.46592 * 180.02562 * 5 3 2 8 8 C 1.52998 * 109.47196 * 179.97438 * 7 5 3 9 9 C 1.53007 * 109.46929 * 300.00052 * 8 7 5 10 10 H 1.08997 * 109.46933 * 179.97438 * 9 8 7 11 11 N 1.46503 * 109.46627 * 299.99711 * 9 8 7 12 12 C 1.34776 * 119.99557 * 204.99939 * 11 9 8 13 13 O 1.21619 * 120.00082 * 0.02562 * 12 11 9 14 14 C 1.47307 * 120.00096 * 180.02562 * 12 11 9 15 15 C 1.39820 * 120.13147 * 0.02562 * 14 12 11 16 16 C 1.37579 * 119.96364 * 179.97438 * 15 14 12 17 17 C 1.50704 * 119.88274 * 179.97438 * 16 15 14 18 18 O 1.42897 * 109.46855 * 254.99906 * 17 16 15 19 19 Si 1.86303 * 109.46859 * 14.99421 * 17 16 15 20 20 C 1.39146 * 120.23862 * 359.97438 * 16 15 14 21 21 O 1.35717 * 119.86096 * 179.97438 * 20 16 15 22 22 C 1.42901 * 116.99727 * 180.02562 * 21 20 16 23 23 C 1.38723 * 120.27670 * 0.02562 * 20 16 15 24 24 C 1.38409 * 120.02860 * 359.73982 * 23 20 16 25 25 O 1.35658 * 120.11839 * 180.26974 * 24 23 20 26 26 C 1.42900 * 116.99953 * 0.24117 * 25 24 23 27 27 C 1.53003 * 109.47047 * 59.99633 * 9 8 7 28 28 C 1.52997 * 109.47047 * 299.99832 * 27 9 8 29 29 H 1.09001 * 109.47157 * 299.99890 * 1 2 3 30 30 H 1.09004 * 109.47122 * 60.00023 * 1 2 3 31 31 H 1.09000 * 109.47070 * 180.02562 * 1 2 3 32 32 H 1.09001 * 109.47495 * 299.99553 * 7 5 3 33 33 H 1.08994 * 109.47783 * 59.99733 * 7 5 3 34 34 H 1.08998 * 109.47383 * 59.99255 * 8 7 5 35 35 H 1.08999 * 109.47724 * 179.97438 * 8 7 5 36 36 H 0.96998 * 120.00340 * 24.99977 * 11 9 8 37 37 H 1.08004 * 120.01648 * 359.97438 * 15 14 12 38 38 H 1.08997 * 109.47304 * 134.99639 * 17 16 15 39 39 H 0.96705 * 114.00268 * 299.99626 * 18 17 16 40 40 H 1.48494 * 109.99812 * 60.00073 * 19 17 16 41 41 H 1.48497 * 109.99651 * 181.32129 * 19 17 16 42 42 H 1.09001 * 109.47067 * 299.99603 * 22 21 20 43 43 H 1.08997 * 109.47228 * 60.00416 * 22 21 20 44 44 H 1.09004 * 109.47157 * 180.02562 * 22 21 20 45 45 H 1.08000 * 119.98819 * 179.97438 * 23 20 16 46 46 H 1.09005 * 109.46901 * 179.97438 * 26 25 24 47 47 H 1.08990 * 109.47262 * 299.99256 * 26 25 24 48 48 H 1.09003 * 109.47222 * 59.99504 * 26 25 24 49 49 H 1.08998 * 109.46912 * 60.00472 * 27 9 8 50 50 H 1.09001 * 109.46424 * 180.02562 * 27 9 8 51 51 H 1.08994 * 109.47300 * 300.00075 * 28 27 9 52 52 H 1.09001 * 109.46642 * 179.97438 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2747 -0.0006 6 1 3.9558 0.7808 -0.8908 7 6 4.0002 2.7420 0.0002 8 6 5.5281 2.8221 0.0002 9 6 6.0751 2.1278 1.2492 10 1 7.1636 2.1845 1.2490 11 7 5.5512 2.7914 2.4456 12 6 6.2325 2.7236 3.6066 13 8 7.2823 2.1120 3.6608 14 6 5.7055 3.3903 4.8098 15 6 4.4986 4.0938 4.7507 16 6 4.0094 4.7148 5.8768 17 6 2.7087 5.4730 5.8109 18 8 2.9752 6.8769 5.8118 19 14 1.8009 5.0143 4.2500 20 6 4.7113 4.6453 7.0762 21 8 4.2219 5.2611 8.1822 22 6 4.9924 5.1509 9.3806 23 6 5.9097 3.9500 7.1460 24 6 6.4098 3.3170 6.0213 25 8 7.5788 2.6320 6.0889 26 6 8.2397 2.6002 7.3555 27 6 5.6412 0.6606 1.2484 28 6 4.1133 0.5806 1.2484 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 3.6102 3.2367 -0.8893 33 1 3.6108 3.2356 0.8905 34 1 5.9179 2.3284 -0.8899 35 1 5.8372 3.8673 0.0003 36 1 4.7141 3.2796 2.4023 37 1 3.9507 4.1497 3.8217 38 1 2.0958 5.2189 6.6757 39 1 3.4469 7.1872 6.5969 40 1 1.5179 3.5567 4.2368 41 1 0.5314 5.7791 4.1574 42 1 5.0945 4.1000 9.6515 43 1 5.9803 5.5820 9.2183 44 1 4.4899 5.6862 10.1862 45 1 6.4508 3.8994 8.0793 46 1 9.1593 2.0210 7.2710 47 1 8.4780 3.6172 7.6666 48 1 7.5860 2.1377 8.0950 49 1 6.0310 0.1670 0.3582 50 1 6.0306 0.1662 2.1384 51 1 3.7236 1.0743 2.1386 52 1 3.8043 -0.4647 1.2474 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14474850_12297780.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:08 Heat of formation + Delta-G solvation = -198.587366 kcal Electronic energy + Delta-G solvation = -37332.193712 eV Core-core repulsion = 32457.359741 eV Total energy + Delta-G solvation = -4874.833972 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -42.15322 -41.73487 -40.74430 -40.04090 -38.81863 -38.31384 -37.35886 -36.91645 -34.74557 -32.33326 -32.17881 -31.91420 -30.79093 -29.14114 -28.64166 -28.20510 -26.07215 -25.15311 -24.41357 -23.75947 -22.96821 -21.81330 -21.53927 -20.19533 -19.99635 -18.80256 -18.55168 -18.47969 -17.84292 -17.71535 -17.37579 -17.23793 -17.13581 -16.65400 -16.43800 -16.30196 -16.19821 -15.83873 -15.58373 -15.51904 -15.09697 -14.93085 -14.81301 -14.30038 -14.20730 -14.17368 -14.05101 -13.84573 -13.70359 -13.52072 -13.39309 -13.29580 -13.14372 -12.93451 -12.85540 -12.67894 -12.56429 -12.25829 -12.10159 -11.98913 -11.75826 -11.67243 -11.61381 -11.38927 -11.30532 -11.16058 -11.08693 -10.62384 -9.97513 -9.89746 -9.13940 -4.92591 -0.22359 0.12026 1.24324 1.39905 1.63196 1.74627 1.87824 1.93865 2.02483 2.13462 2.23899 2.72586 3.42625 3.47342 3.50935 3.58207 3.65184 3.70201 3.73316 3.90474 3.94037 3.97175 3.99622 4.03402 4.09122 4.11423 4.11624 4.14660 4.19342 4.21586 4.26412 4.29249 4.34567 4.37151 4.38571 4.41595 4.51174 4.59928 4.62599 4.74412 4.77992 4.87990 4.99519 5.01693 5.02723 5.05284 5.13660 5.21305 5.27253 5.27741 5.45114 5.62792 5.91433 6.26029 6.60656 6.62118 6.78309 7.42517 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.462 3.538 4 O -0.504 6.504 5 C -0.081 4.081 6 H 0.113 0.887 7 C -0.108 4.108 8 C -0.128 4.128 9 C 0.145 3.855 10 H 0.096 0.904 11 N -0.727 5.727 12 C 0.567 3.433 13 O -0.517 6.517 14 C -0.205 4.205 15 C 0.000 4.000 16 C -0.189 4.189 17 C -0.063 4.063 18 O -0.535 6.535 19 Si 0.730 3.270 20 C 0.206 3.794 21 O -0.309 6.309 22 C 0.023 3.977 23 C -0.309 4.309 24 C 0.232 3.768 25 O -0.273 6.273 26 C 0.019 3.981 27 C -0.129 4.129 28 C -0.111 4.111 29 H 0.063 0.937 30 H 0.064 0.936 31 H 0.102 0.898 32 H 0.081 0.919 33 H 0.071 0.929 34 H 0.085 0.915 35 H 0.081 0.919 36 H 0.396 0.604 37 H 0.139 0.861 38 H 0.075 0.925 39 H 0.366 0.634 40 H -0.247 1.247 41 H -0.251 1.251 42 H 0.060 0.940 43 H 0.061 0.939 44 H 0.107 0.893 45 H 0.145 0.855 46 H 0.107 0.893 47 H 0.057 0.943 48 H 0.057 0.943 49 H 0.078 0.922 50 H 0.077 0.923 51 H 0.068 0.932 52 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.184 -0.789 1.671 2.195 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.305 3.695 4 O -0.392 6.392 5 C -0.100 4.100 6 H 0.131 0.869 7 C -0.146 4.146 8 C -0.165 4.165 9 C 0.041 3.959 10 H 0.114 0.886 11 N -0.381 5.381 12 C 0.355 3.645 13 O -0.393 6.393 14 C -0.209 4.209 15 C -0.019 4.019 16 C -0.191 4.191 17 C -0.171 4.171 18 O -0.340 6.340 19 Si 0.628 3.372 20 C 0.159 3.841 21 O -0.221 6.221 22 C -0.072 4.072 23 C -0.328 4.328 24 C 0.182 3.818 25 O -0.183 6.183 26 C -0.076 4.076 27 C -0.168 4.168 28 C -0.149 4.149 29 H 0.081 0.919 30 H 0.083 0.917 31 H 0.120 0.880 32 H 0.100 0.900 33 H 0.089 0.911 34 H 0.103 0.897 35 H 0.100 0.900 36 H 0.232 0.768 37 H 0.156 0.844 38 H 0.092 0.908 39 H 0.214 0.786 40 H -0.172 1.172 41 H -0.175 1.175 42 H 0.078 0.922 43 H 0.080 0.920 44 H 0.126 0.874 45 H 0.162 0.838 46 H 0.126 0.874 47 H 0.076 0.924 48 H 0.075 0.925 49 H 0.097 0.903 50 H 0.096 0.904 51 H 0.086 0.914 52 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 0.627 -1.316 0.692 1.614 hybrid contribution -0.334 0.254 2.353 2.390 sum 0.294 -1.063 3.044 3.238 Atomic orbital electron populations 1.23306 0.76089 1.03920 1.02663 1.86511 1.23593 1.33459 1.83889 1.23873 0.92121 0.81403 0.72144 1.90684 1.67205 1.36306 1.44955 1.21176 0.86797 0.99565 1.02416 0.86896 1.21489 0.95689 0.93359 1.04046 1.21874 0.94836 1.02184 0.97643 1.20984 0.99803 0.91524 0.83607 0.88631 1.46043 1.26466 1.55935 1.09691 1.17755 0.84107 0.80120 0.82517 1.90844 1.22101 1.41853 1.84511 1.19121 0.98425 1.10095 0.93272 1.20677 0.92658 0.91937 0.96581 1.19432 1.00741 1.07422 0.91461 1.25216 0.96474 0.83338 1.12119 1.86729 1.80072 1.20273 1.46949 0.93281 0.81239 0.79533 0.83127 1.18737 0.90317 0.88750 0.86280 1.86036 1.49026 1.69552 1.17507 1.23214 0.96729 1.02666 0.84560 1.21273 1.00708 1.10545 1.00320 1.18702 0.84576 0.86845 0.91672 1.86405 1.31680 1.66720 1.33474 1.23238 0.97900 1.02373 0.84138 1.21943 0.94677 0.96524 1.03642 1.21520 0.96318 1.01276 0.95759 0.91857 0.91725 0.87955 0.90017 0.91051 0.89657 0.90038 0.76806 0.84399 0.90760 0.78632 1.17159 1.17496 0.92181 0.92019 0.87441 0.83755 0.87434 0.92407 0.92486 0.90293 0.90443 0.91363 0.90267 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.47 10.47 -39.25 -0.41 -0.88 16 3 C 0.46 0.68 7.25 36.01 0.26 0.94 16 4 O -0.50 -2.00 15.73 -18.75 -0.29 -2.30 16 5 C -0.08 0.11 2.63 -91.77 -0.24 -0.13 16 6 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 7 C -0.11 0.22 4.32 -26.73 -0.12 0.10 16 8 C -0.13 0.37 5.61 -26.73 -0.15 0.22 16 9 C 0.15 -0.14 2.78 -67.92 -0.19 -0.32 16 10 H 0.10 0.05 7.58 -51.93 -0.39 -0.35 16 11 N -0.73 0.02 4.18 -54.91 -0.23 -0.21 16 12 C 0.57 1.77 7.72 -12.57 -0.10 1.67 16 13 O -0.52 -3.35 14.81 -16.66 -0.25 -3.60 16 14 C -0.21 -0.50 5.89 -104.83 -0.62 -1.12 16 15 C 0.00 0.00 8.14 -39.23 -0.32 -0.32 16 16 C -0.19 -0.25 5.27 -104.52 -0.55 -0.80 16 17 C -0.06 -0.08 2.32 36.01 0.08 0.00 16 18 O -0.54 -1.00 12.65 -35.23 -0.45 -1.44 16 19 Si 0.73 0.59 30.16 -169.99 -5.13 -4.53 16 20 C 0.21 0.22 6.62 -39.07 -0.26 -0.04 16 21 O -0.31 -0.01 9.36 -18.86 -0.18 -0.19 16 22 C 0.02 -0.07 9.80 101.05 0.99 0.92 16 23 C -0.31 -0.21 8.01 -39.34 -0.31 -0.53 16 24 C 0.23 0.61 6.70 -38.73 -0.26 0.35 16 25 O -0.27 -0.90 8.56 -40.60 -0.35 -1.25 16 26 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 27 C -0.13 0.14 5.60 -26.73 -0.15 -0.01 16 28 C -0.11 0.13 4.98 -26.73 -0.13 0.00 16 29 H 0.06 -0.01 8.13 -51.93 -0.42 -0.44 16 30 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 31 H 0.10 -0.27 8.14 -51.93 -0.42 -0.70 16 32 H 0.08 -0.14 8.10 -51.93 -0.42 -0.56 16 33 H 0.07 -0.14 6.46 -51.93 -0.34 -0.47 16 34 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 35 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 36 H 0.40 -0.71 4.88 -40.82 -0.20 -0.90 16 37 H 0.14 -0.22 3.43 -52.48 -0.18 -0.40 16 38 H 0.07 0.11 7.82 -51.93 -0.41 -0.30 16 39 H 0.37 -0.08 8.58 45.56 0.39 0.31 16 40 H -0.25 -0.49 7.11 56.52 0.40 -0.09 16 41 H -0.25 -0.93 7.11 56.52 0.40 -0.53 16 42 H 0.06 -0.22 7.65 -51.93 -0.40 -0.62 16 43 H 0.06 -0.24 7.65 -51.93 -0.40 -0.64 16 44 H 0.11 -0.49 8.14 -51.93 -0.42 -0.91 16 45 H 0.14 -0.24 4.50 -52.49 -0.24 -0.48 16 46 H 0.11 -0.22 8.14 -51.93 -0.42 -0.65 16 47 H 0.06 -0.14 7.65 -51.93 -0.40 -0.54 16 48 H 0.06 -0.13 7.67 -51.93 -0.40 -0.53 16 49 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 50 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 51 H 0.07 -0.03 7.60 -51.93 -0.39 -0.42 16 52 H 0.08 -0.08 8.11 -51.93 -0.42 -0.50 16 LS Contribution 413.23 15.07 6.23 6.23 Total: 0.00 -9.83 413.23 -8.66 -18.50 By element: Atomic # 1 Polarization: -5.66 SS G_CDS: -7.61 Total: -13.27 kcal Atomic # 6 Polarization: 2.95 SS G_CDS: 0.00 Total: 2.95 kcal Atomic # 7 Polarization: 0.02 SS G_CDS: -0.23 Total: -0.21 kcal Atomic # 8 Polarization: -7.74 SS G_CDS: -1.92 Total: -9.66 kcal Atomic # 14 Polarization: 0.59 SS G_CDS: -5.13 Total: -4.53 kcal Total LS contribution 6.23 Total: 6.23 kcal Total: -9.83 -8.66 -18.50 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14474850_12297780.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -180.089 kcal (2) G-P(sol) polarization free energy of solvation -9.834 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -189.923 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.664 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.498 kcal (6) G-S(sol) free energy of system = (1) + (5) -198.587 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds