Wall clock time and date at job start Tue Mar 9 2021 13:15:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34226 * 117.00005 * 2 1 4 4 O 1.20827 * 120.00161 * 0.02562 * 3 2 1 5 5 C 1.50702 * 120.00205 * 179.97438 * 3 2 1 6 6 H 1.09005 * 109.46649 * 59.99865 * 5 3 2 7 7 C 1.52994 * 109.47400 * 180.02562 * 5 3 2 8 8 C 1.52999 * 109.47160 * 179.97438 * 7 5 3 9 9 C 1.52998 * 109.47653 * 300.00470 * 8 7 5 10 10 H 1.08997 * 109.47146 * 179.97438 * 9 8 7 11 11 N 1.46500 * 109.46887 * 300.00192 * 9 8 7 12 12 C 1.34777 * 119.99784 * 204.99906 * 11 9 8 13 13 O 1.21572 * 120.00036 * 0.02562 * 12 11 9 14 14 C 1.47691 * 119.99970 * 179.97438 * 12 11 9 15 15 C 1.39833 * 120.16569 * 180.02562 * 14 12 11 16 16 F 1.35098 * 120.11060 * 359.97438 * 15 14 12 17 17 C 1.38317 * 119.77917 * 179.97438 * 15 14 12 18 18 C 1.38205 * 120.11700 * 359.74624 * 17 15 14 19 19 C 1.38457 * 120.33821 * 0.50675 * 18 17 15 20 20 C 1.50699 * 119.88998 * 179.76494 * 19 18 17 21 21 O 1.42903 * 109.47152 * 119.73041 * 20 19 18 22 22 Si 1.86293 * 109.47431 * 359.72932 * 20 19 18 23 23 C 1.37860 * 120.21978 * 359.49476 * 19 18 17 24 24 C 1.53001 * 109.46964 * 59.99659 * 9 8 7 25 25 C 1.53000 * 109.47186 * 300.00052 * 24 9 8 26 26 H 1.09003 * 109.47140 * 179.97438 * 1 2 3 27 27 H 1.08993 * 109.47206 * 299.99742 * 1 2 3 28 28 H 1.09002 * 109.46495 * 59.99876 * 1 2 3 29 29 H 1.09005 * 109.46825 * 60.00800 * 7 5 3 30 30 H 1.08996 * 109.47472 * 300.00060 * 7 5 3 31 31 H 1.08999 * 109.47410 * 180.02562 * 8 7 5 32 32 H 1.09002 * 109.47166 * 60.00511 * 8 7 5 33 33 H 0.96998 * 120.00217 * 24.99314 * 11 9 8 34 34 H 1.07997 * 119.94453 * 180.02562 * 17 15 14 35 35 H 1.07997 * 119.83366 * 180.27628 * 18 17 15 36 36 H 1.09008 * 109.47393 * 239.72435 * 20 19 18 37 37 H 0.96700 * 114.00311 * 180.02562 * 21 20 19 38 38 H 1.48501 * 109.99918 * 298.67862 * 22 20 19 39 39 H 1.48506 * 109.99973 * 59.99460 * 22 20 19 40 40 H 1.08001 * 120.06296 * 180.22926 * 23 19 18 41 41 H 1.09002 * 109.46867 * 60.00565 * 24 9 8 42 42 H 1.09003 * 109.47267 * 180.02562 * 24 9 8 43 43 H 1.08993 * 109.47099 * 300.00169 * 25 24 9 44 44 H 1.09002 * 109.46884 * 180.02562 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 3.9564 0.7805 -0.8892 7 6 4.0001 2.7420 0.0011 8 6 5.5280 2.8221 0.0023 9 6 6.0742 2.1283 1.2518 10 1 7.1627 2.1850 1.2524 11 7 5.5494 2.7922 2.4477 12 6 6.2298 2.7248 3.6092 13 8 7.2793 2.1135 3.6643 14 6 5.7011 3.3945 4.8147 15 6 6.4045 3.3272 6.0214 16 9 7.5707 2.6486 6.0892 17 6 5.9022 3.9579 7.1453 18 6 4.7119 4.6566 7.0748 19 6 4.0088 4.7219 5.8838 20 6 2.7092 5.4822 5.8196 21 8 2.8212 6.5370 4.8620 22 14 2.3276 6.2022 7.4948 23 6 4.4965 4.0986 4.7550 24 6 5.6404 0.6611 1.2512 25 6 4.1125 0.5810 1.2501 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8899 28 1 -0.3632 0.5139 -0.8900 29 1 3.6102 3.2359 0.8912 30 1 3.6108 3.2364 -0.8888 31 1 5.8371 3.8673 0.0032 32 1 5.9185 2.3282 -0.8874 33 1 4.7124 3.2803 2.4036 34 1 6.4435 3.9080 8.0785 35 1 4.3262 5.1510 7.9541 36 1 1.9071 4.8062 5.5233 37 1 2.0197 7.0697 4.7681 38 1 2.1771 5.1134 8.4933 39 1 3.4138 7.1257 7.9102 40 1 3.9479 4.1543 3.8264 41 1 6.0308 0.1672 0.3614 42 1 6.0291 0.1669 2.1416 43 1 3.7221 1.0750 2.1399 44 1 3.8034 -0.4642 1.2502 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14474850_12335834.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:11 Heat of formation + Delta-G solvation = -168.354525 kcal Electronic energy + Delta-G solvation = -30258.111057 eV Core-core repulsion = 25863.573726 eV Total energy + Delta-G solvation = -4394.537331 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.141 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -50.14756 -42.01911 -41.40808 -40.28125 -38.99022 -37.54384 -37.45613 -35.11979 -33.16608 -32.54974 -31.91981 -31.08910 -28.60267 -26.66741 -25.85317 -24.81859 -23.76463 -23.32812 -21.85709 -21.71883 -20.28446 -19.36935 -18.64845 -18.62401 -18.32210 -17.91124 -17.81234 -17.44053 -17.04868 -16.66553 -16.54114 -16.31258 -15.99179 -15.58775 -15.44063 -15.10649 -14.90822 -14.75477 -14.54015 -14.28474 -14.13026 -13.98324 -13.91951 -13.73378 -13.44401 -13.30337 -13.19418 -12.93448 -12.69795 -12.51705 -12.23284 -12.08809 -12.01936 -11.84754 -11.64724 -11.44651 -11.23749 -11.16760 -10.56543 -10.42025 -10.17406 -9.89927 -4.93132 -0.67381 -0.19902 1.10831 1.27404 1.48619 1.66382 1.72197 1.90681 1.96030 2.32884 2.86996 3.19921 3.26291 3.40934 3.45749 3.57548 3.63543 3.66502 3.85677 3.93350 4.01938 4.03582 4.12377 4.22276 4.26970 4.29574 4.30471 4.38359 4.40091 4.45346 4.58389 4.62423 4.64919 4.69280 4.73055 4.77726 4.92644 4.97993 5.03151 5.06894 5.10596 5.21044 5.25992 5.35653 5.40128 5.44166 6.28528 6.66519 6.89109 6.97909 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.365 6.365 3 C 0.463 3.537 4 O -0.535 6.535 5 C -0.075 4.075 6 H 0.134 0.866 7 C -0.103 4.103 8 C -0.116 4.116 9 C 0.139 3.861 10 H 0.080 0.920 11 N -0.703 5.703 12 C 0.557 3.443 13 O -0.564 6.564 14 C -0.184 4.184 15 C 0.136 3.864 16 F -0.131 7.131 17 C -0.152 4.152 18 C -0.074 4.074 19 C -0.100 4.100 20 C -0.077 4.077 21 O -0.561 6.561 22 Si 0.767 3.233 23 C -0.024 4.024 24 C -0.124 4.124 25 C -0.103 4.103 26 H 0.125 0.875 27 H 0.061 0.939 28 H 0.061 0.939 29 H 0.065 0.935 30 H 0.080 0.920 31 H 0.083 0.917 32 H 0.105 0.895 33 H 0.409 0.591 34 H 0.165 0.835 35 H 0.142 0.858 36 H 0.104 0.896 37 H 0.407 0.593 38 H -0.282 1.282 39 H -0.292 1.292 40 H 0.160 0.840 41 H 0.099 0.901 42 H 0.053 0.947 43 H 0.058 0.942 44 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.912 1.675 -1.796 8.285 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.281 6.281 3 C 0.307 3.693 4 O -0.424 6.424 5 C -0.094 4.094 6 H 0.151 0.849 7 C -0.141 4.141 8 C -0.154 4.154 9 C 0.036 3.964 10 H 0.098 0.902 11 N -0.356 5.356 12 C 0.345 3.655 13 O -0.444 6.444 14 C -0.188 4.188 15 C 0.116 3.884 16 F -0.109 7.109 17 C -0.171 4.171 18 C -0.092 4.092 19 C -0.100 4.100 20 C -0.187 4.187 21 O -0.372 6.372 22 Si 0.673 3.327 23 C -0.042 4.042 24 C -0.163 4.163 25 C -0.141 4.141 26 H 0.144 0.856 27 H 0.080 0.920 28 H 0.080 0.920 29 H 0.083 0.917 30 H 0.099 0.901 31 H 0.102 0.898 32 H 0.124 0.876 33 H 0.247 0.753 34 H 0.183 0.817 35 H 0.159 0.841 36 H 0.122 0.878 37 H 0.258 0.742 38 H -0.209 1.209 39 H -0.220 1.220 40 H 0.178 0.822 41 H 0.118 0.882 42 H 0.072 0.928 43 H 0.077 0.923 44 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -6.527 1.331 -1.043 6.742 hybrid contribution 0.115 -0.314 0.034 0.336 sum -6.412 1.017 -1.010 6.570 Atomic orbital electron populations 1.23506 0.75122 1.05467 1.02479 1.86514 1.24690 1.33312 1.83562 1.24302 0.92897 0.81019 0.71090 1.90668 1.68022 1.37201 1.46550 1.21226 0.85254 0.99879 1.03014 0.84852 1.21440 0.95795 0.93102 1.03744 1.21822 0.94316 1.02292 0.96973 1.21160 0.99141 0.92264 0.83864 0.90164 1.45975 1.26201 1.54539 1.08900 1.18129 0.83811 0.79827 0.83770 1.90836 1.24107 1.44034 1.85390 1.20191 0.98910 1.06078 0.93577 1.18040 0.82538 0.93504 0.94343 1.91567 1.45292 1.77190 1.96844 1.21287 0.97846 0.99386 0.98574 1.21162 0.93520 0.96540 0.97979 1.19738 0.97614 0.99359 0.93304 1.24769 0.95295 0.92892 1.05727 1.86427 1.43753 1.45660 1.61328 0.94073 0.86055 0.80091 0.72531 1.21195 0.92045 0.91507 0.99470 1.21888 0.95012 0.95805 1.03558 1.21429 0.95672 1.01442 0.95525 0.85646 0.91985 0.91972 0.91668 0.90089 0.89797 0.87641 0.75252 0.81744 0.84068 0.87826 0.74165 1.20935 1.21982 0.82220 0.88236 0.92786 0.92288 0.89943 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.56 113.37 1.20 1.13 16 2 O -0.36 -0.45 10.47 -51.37 -0.54 -0.99 16 3 C 0.46 0.82 7.25 71.24 0.52 1.33 16 4 O -0.53 -3.85 15.73 21.96 0.35 -3.51 16 5 C -0.07 0.30 2.63 -11.54 -0.03 0.27 16 6 H 0.13 -1.04 8.14 -2.38 -0.02 -1.05 16 7 C -0.10 0.50 4.32 30.59 0.13 0.63 16 8 C -0.12 0.73 5.61 30.59 0.17 0.90 16 9 C 0.14 -0.16 2.78 44.99 0.13 -0.04 16 10 H 0.08 0.22 7.58 -2.39 -0.02 0.20 16 11 N -0.70 -0.64 4.18 -445.56 -1.86 -2.51 16 12 C 0.56 4.81 7.73 86.74 0.67 5.48 16 13 O -0.56 -9.52 15.00 -3.94 -0.06 -9.58 16 14 C -0.18 -1.25 5.88 -20.05 -0.12 -1.37 16 15 C 0.14 1.24 7.29 22.67 0.17 1.41 16 16 F -0.13 -1.90 15.55 44.97 0.70 -1.21 16 17 C -0.15 -0.61 10.01 22.28 0.22 -0.38 16 18 C -0.07 -0.15 8.66 22.31 0.19 0.04 16 19 C -0.10 -0.09 5.42 -19.90 -0.11 -0.20 16 20 C -0.08 0.38 2.81 71.24 0.20 0.58 16 21 O -0.56 2.67 12.74 -148.98 -1.90 0.78 16 22 Si 0.77 -4.37 29.78 68.60 2.04 -2.33 16 23 C -0.02 -0.03 9.09 22.52 0.20 0.17 16 24 C -0.12 0.25 5.60 30.59 0.17 0.42 16 25 C -0.10 0.32 4.98 30.60 0.15 0.48 16 26 H 0.13 -0.94 8.14 -2.39 -0.02 -0.96 16 27 H 0.06 -0.13 8.13 -2.39 -0.02 -0.15 16 28 H 0.06 -0.12 8.13 -2.39 -0.02 -0.14 16 29 H 0.06 -0.25 6.46 -2.38 -0.02 -0.27 16 30 H 0.08 -0.32 8.10 -2.39 -0.02 -0.34 16 31 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 32 H 0.11 -0.98 8.14 -2.39 -0.02 -1.00 16 33 H 0.41 -1.32 4.90 -92.71 -0.45 -1.77 16 34 H 0.16 -0.04 8.06 -2.91 -0.02 -0.07 16 35 H 0.14 -0.05 4.86 -2.91 -0.01 -0.06 16 36 H 0.10 -0.97 7.96 -2.38 -0.02 -0.99 16 37 H 0.41 -5.94 8.74 -74.06 -0.65 -6.59 16 38 H -0.28 0.20 7.11 99.48 0.71 0.90 16 39 H -0.29 -0.52 7.11 99.48 0.71 0.19 16 40 H 0.16 -0.59 6.41 -2.91 -0.02 -0.61 16 41 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 42 H 0.05 0.19 8.14 -2.39 -0.02 0.17 16 43 H 0.06 -0.08 7.60 -2.39 -0.02 -0.10 16 44 H 0.08 -0.25 8.11 -2.39 -0.02 -0.27 16 Total: 0.00 -25.09 362.18 2.59 -22.50 By element: Atomic # 1 Polarization: -14.01 SS G_CDS: -0.01 Total: -14.02 kcal Atomic # 6 Polarization: 6.98 SS G_CDS: 3.87 Total: 10.85 kcal Atomic # 7 Polarization: -0.64 SS G_CDS: -1.86 Total: -2.51 kcal Atomic # 8 Polarization: -11.15 SS G_CDS: -2.15 Total: -13.30 kcal Atomic # 9 Polarization: -1.90 SS G_CDS: 0.70 Total: -1.21 kcal Atomic # 14 Polarization: -4.37 SS G_CDS: 2.04 Total: -2.33 kcal Total: -25.09 2.59 -22.50 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14474850_12335834.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -145.852 kcal (2) G-P(sol) polarization free energy of solvation -25.090 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -170.942 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.588 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.502 kcal (6) G-S(sol) free energy of system = (1) + (5) -168.355 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds