Wall clock time and date at job start Tue Mar 9 2021 13:16:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34229 * 116.99579 * 2 1 4 4 O 1.20819 * 120.00672 * 359.97438 * 3 2 1 5 5 C 1.50703 * 119.99682 * 179.97438 * 3 2 1 6 6 H 1.09002 * 109.47152 * 59.99843 * 5 3 2 7 7 C 1.53005 * 109.47304 * 179.97438 * 5 3 2 8 8 C 1.52997 * 109.47452 * 180.02562 * 7 5 3 9 9 C 1.53002 * 109.46817 * 300.00239 * 8 7 5 10 10 H 1.09004 * 109.46733 * 179.97438 * 9 8 7 11 11 N 1.46496 * 109.47037 * 299.99555 * 9 8 7 12 12 C 1.34776 * 120.00390 * 275.00000 * 11 9 8 13 13 O 1.21648 * 119.99790 * 0.02562 * 12 11 9 14 14 C 1.47056 * 120.00129 * 179.97438 * 12 11 9 15 15 C 1.35858 * 125.42514 * 179.69643 * 14 12 11 16 16 C 1.41594 * 107.72700 * 179.84813 * 15 14 12 17 17 C 1.40068 * 133.38152 * 180.02562 * 16 15 14 18 18 C 1.36480 * 119.82973 * 180.29547 * 17 16 15 19 19 C 1.38894 * 120.61394 * 0.05138 * 18 17 16 20 20 C 1.50702 * 119.67458 * 179.97438 * 19 18 17 21 21 O 1.42905 * 109.46983 * 120.02120 * 20 19 18 22 22 Si 1.86296 * 109.47174 * 0.02562 * 20 19 18 23 23 C 1.37717 * 120.65214 * 359.97438 * 19 18 17 24 24 C 1.39191 * 119.80476 * 359.97438 * 23 19 18 25 25 N 1.37487 * 133.18175 * 180.02562 * 24 23 19 26 26 C 1.53000 * 109.47233 * 60.00194 * 9 8 7 27 27 C 1.52997 * 109.47060 * 299.99657 * 26 9 8 28 28 H 1.09003 * 109.46952 * 300.00275 * 1 2 3 29 29 H 1.09000 * 109.47246 * 60.00167 * 1 2 3 30 30 H 1.09001 * 109.46940 * 180.02562 * 1 2 3 31 31 H 1.09002 * 109.46935 * 59.99966 * 7 5 3 32 32 H 1.09001 * 109.46812 * 300.00308 * 7 5 3 33 33 H 1.08993 * 109.47194 * 179.97438 * 8 7 5 34 34 H 1.09002 * 109.46695 * 59.99734 * 8 7 5 35 35 H 0.97001 * 119.99395 * 95.00922 * 11 9 8 36 36 H 1.08002 * 126.13676 * 359.97438 * 15 14 12 37 37 H 1.07997 * 120.08783 * 0.34571 * 17 16 15 38 38 H 1.07996 * 119.69150 * 180.02562 * 18 17 16 39 39 H 1.08996 * 109.47124 * 240.01741 * 20 19 18 40 40 H 0.96704 * 113.99691 * 299.99375 * 21 20 19 41 41 H 1.48501 * 110.00380 * 179.97438 * 22 20 19 42 42 H 1.48502 * 110.00203 * 301.32094 * 22 20 19 43 43 H 1.07994 * 120.09581 * 180.02562 * 23 19 18 44 44 H 0.96999 * 125.60888 * 359.97438 * 25 24 23 45 45 H 1.09002 * 109.47398 * 59.99826 * 26 9 8 46 46 H 1.09001 * 109.47194 * 180.02562 * 26 9 8 47 47 H 1.08996 * 109.47853 * 180.02562 * 27 26 9 48 48 H 1.09002 * 109.47153 * 300.00319 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 1 3.9564 0.7806 -0.8891 7 6 4.0001 2.7422 -0.0002 8 6 5.5280 2.8223 -0.0002 9 6 6.0750 2.1294 1.2494 10 1 7.1636 2.1861 1.2491 11 7 5.5513 2.7941 2.4452 12 6 6.1718 3.8851 2.9362 13 8 7.1666 4.3181 2.3861 14 6 5.6456 4.5526 4.1362 15 6 6.1845 5.6513 4.7263 16 6 5.3808 5.9776 5.8454 17 6 5.4431 6.9889 6.8125 18 6 4.5023 7.0429 7.7998 19 6 3.4816 6.1027 7.8565 20 6 2.4543 6.1820 8.9562 21 8 1.1551 6.3443 8.3835 22 14 2.8338 7.6364 10.0568 23 6 3.3991 5.0985 6.9176 24 6 4.3462 5.0229 5.9004 25 7 4.5261 4.1609 4.8445 26 6 5.6413 0.6621 1.2501 27 6 4.1134 0.5820 1.2501 28 1 -0.3633 0.5139 0.8900 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 3.6100 3.2369 0.8893 32 1 3.6107 3.2357 -0.8907 33 1 5.8370 3.8675 -0.0012 34 1 5.9177 2.3277 -0.8900 35 1 4.7578 2.4489 2.8836 36 1 7.0665 6.1820 4.3991 37 1 6.2330 7.7244 6.7767 38 1 4.5522 7.8239 8.5441 39 1 2.4800 5.2647 9.5443 40 1 1.0593 7.1422 7.8455 41 1 1.8275 7.7262 11.1451 42 1 4.1950 7.4955 10.6334 43 1 2.6014 4.3724 6.9699 44 1 3.9612 3.4012 4.6331 45 1 6.0311 0.1675 0.3603 46 1 6.0306 0.1685 2.1405 47 1 3.8043 -0.4632 1.2511 48 1 3.7237 1.0765 2.1398 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14474850_13158378.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:16:18 Heat of formation + Delta-G solvation = -95.747205 kcal Electronic energy + Delta-G solvation = -32030.754902 eV Core-core repulsion = 27631.404226 eV Total energy + Delta-G solvation = -4399.350676 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.161 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -42.71937 -41.92255 -40.89886 -39.32019 -38.73767 -37.50684 -36.89762 -35.06297 -33.27431 -32.14413 -31.96424 -30.77413 -30.39572 -28.73955 -26.95626 -25.17636 -24.33031 -23.95342 -23.24130 -22.08375 -21.83946 -21.36466 -20.36021 -19.71103 -18.67089 -18.44601 -17.88268 -17.78905 -17.57118 -16.95773 -16.77132 -16.58621 -16.25912 -15.90896 -15.71645 -15.54649 -15.25346 -15.07064 -14.89698 -14.81883 -14.67213 -14.47151 -14.33254 -14.08348 -13.98238 -13.74069 -13.49806 -13.41166 -13.12275 -13.06889 -12.60371 -12.54977 -12.48278 -12.11858 -11.96777 -11.89452 -11.78743 -11.64758 -11.56597 -11.28698 -11.23749 -10.93114 -10.45852 -10.27124 -9.31738 -8.82162 -5.00896 -0.33364 0.52366 1.01237 1.10882 1.29493 1.61250 1.65568 1.76203 1.92192 1.99956 2.27179 2.78298 3.28001 3.40754 3.41698 3.44568 3.54085 3.63742 3.70434 3.74263 3.90377 3.94388 4.01135 4.08988 4.13152 4.15233 4.16982 4.21626 4.24697 4.29359 4.40069 4.43803 4.47478 4.51478 4.55227 4.60044 4.74870 4.79665 4.82444 4.89649 4.96676 4.99452 5.01334 5.12741 5.25126 5.32861 5.37277 5.40826 5.52720 5.61571 5.96740 6.18084 6.33475 6.55860 6.65953 6.99308 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.461 3.539 4 O -0.503 6.503 5 C -0.080 4.080 6 H 0.114 0.886 7 C -0.103 4.103 8 C -0.131 4.131 9 C 0.143 3.857 10 H 0.099 0.901 11 N -0.723 5.723 12 C 0.586 3.414 13 O -0.516 6.516 14 C 0.013 3.987 15 C -0.099 4.099 16 C -0.116 4.116 17 C -0.050 4.050 18 C -0.146 4.146 19 C -0.088 4.088 20 C -0.068 4.068 21 O -0.541 6.541 22 Si 0.693 3.307 23 C -0.104 4.104 24 C 0.116 3.884 25 N -0.579 5.579 26 C -0.127 4.127 27 C -0.113 4.113 28 H 0.063 0.937 29 H 0.064 0.936 30 H 0.103 0.897 31 H 0.070 0.930 32 H 0.076 0.924 33 H 0.079 0.921 34 H 0.080 0.920 35 H 0.394 0.606 36 H 0.159 0.841 37 H 0.132 0.868 38 H 0.129 0.871 39 H 0.114 0.886 40 H 0.380 0.620 41 H -0.256 1.256 42 H -0.257 1.257 43 H 0.126 0.874 44 H 0.416 0.584 45 H 0.090 0.910 46 H 0.079 0.921 47 H 0.086 0.914 48 H 0.062 0.938 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.844 -2.586 -0.907 2.868 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.304 3.696 4 O -0.390 6.390 5 C -0.099 4.099 6 H 0.132 0.868 7 C -0.141 4.141 8 C -0.170 4.170 9 C 0.039 3.961 10 H 0.117 0.883 11 N -0.376 5.376 12 C 0.373 3.627 13 O -0.391 6.391 14 C -0.096 4.096 15 C -0.126 4.126 16 C -0.121 4.121 17 C -0.069 4.069 18 C -0.165 4.165 19 C -0.090 4.090 20 C -0.179 4.179 21 O -0.346 6.346 22 Si 0.595 3.405 23 C -0.125 4.125 24 C 0.006 3.994 25 N -0.183 5.183 26 C -0.165 4.165 27 C -0.150 4.150 28 H 0.082 0.918 29 H 0.083 0.917 30 H 0.122 0.878 31 H 0.089 0.911 32 H 0.095 0.905 33 H 0.098 0.902 34 H 0.099 0.901 35 H 0.229 0.771 36 H 0.176 0.824 37 H 0.150 0.850 38 H 0.147 0.853 39 H 0.131 0.869 40 H 0.227 0.773 41 H -0.181 1.181 42 H -0.182 1.182 43 H 0.144 0.856 44 H 0.254 0.746 45 H 0.108 0.892 46 H 0.098 0.902 47 H 0.105 0.895 48 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges -0.292 -2.420 -0.295 2.456 hybrid contribution -0.984 -1.228 -0.114 1.578 sum -1.276 -3.649 -0.409 3.887 Atomic orbital electron populations 1.23321 0.75921 1.04014 1.02723 1.86506 1.23731 1.33350 1.83905 1.23838 0.92060 0.81439 0.72312 1.90700 1.67174 1.36380 1.44738 1.21174 0.86912 0.99745 1.02115 0.86781 1.21430 0.95791 0.92907 1.03984 1.21967 0.94703 1.02561 0.97745 1.21074 0.99928 0.91268 0.83790 0.88319 1.46029 1.31398 1.29846 1.30277 1.17183 0.83307 0.80013 0.82225 1.90879 1.24760 1.64154 1.59280 1.20118 0.92033 1.00352 0.97138 1.20974 1.00706 0.96097 0.94856 1.18225 0.97252 0.98127 0.98504 1.20384 0.98085 0.96226 0.92197 1.20486 0.96193 0.99739 1.00081 1.20033 0.96800 0.95281 0.96886 1.25083 0.83856 1.10185 0.98800 1.86499 1.28849 1.48936 1.70360 0.94530 0.79836 0.85366 0.80758 1.19858 0.98354 1.00364 0.93906 1.18308 0.97971 0.92278 0.90868 1.41895 1.25118 1.27253 1.24078 1.21869 0.95018 0.95200 1.04376 1.21542 0.95972 1.01761 0.95756 0.91812 0.91716 0.87819 0.91116 0.90536 0.90248 0.90104 0.77130 0.82371 0.84993 0.85347 0.86900 0.77259 1.18139 1.18190 0.85578 0.74624 0.89178 0.90212 0.89538 0.91955 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.12 10.47 -39.25 -0.41 -0.53 16 3 C 0.46 0.40 7.26 36.01 0.26 0.66 16 4 O -0.50 -2.04 15.73 -18.74 -0.29 -2.33 16 5 C -0.08 0.17 2.63 -91.77 -0.24 -0.07 16 6 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 7 C -0.10 0.11 4.34 -26.73 -0.12 0.00 16 8 C -0.13 0.22 5.60 -26.73 -0.15 0.07 16 9 C 0.14 -0.29 2.78 -67.93 -0.19 -0.48 16 10 H 0.10 -0.07 7.58 -51.93 -0.39 -0.46 16 11 N -0.72 1.09 4.23 -55.00 -0.23 0.85 16 12 C 0.59 0.95 7.76 -12.69 -0.10 0.85 16 13 O -0.52 -2.57 16.50 5.23 0.09 -2.48 16 14 C 0.01 0.02 6.96 -82.29 -0.57 -0.56 16 15 C -0.10 -0.20 10.53 -39.16 -0.41 -0.61 16 16 C -0.12 -0.20 6.16 -106.93 -0.66 -0.86 16 17 C -0.05 -0.02 10.06 -39.53 -0.40 -0.42 16 18 C -0.15 0.04 8.59 -39.97 -0.34 -0.31 16 19 C -0.09 -0.02 5.40 -104.57 -0.56 -0.58 16 20 C -0.07 0.03 2.81 36.01 0.10 0.13 16 21 O -0.54 -0.04 12.76 -35.23 -0.45 -0.49 16 22 Si 0.69 -0.79 29.75 -169.99 -5.06 -5.84 16 23 C -0.10 -0.07 9.61 -39.42 -0.38 -0.45 16 24 C 0.12 0.14 7.25 -83.97 -0.61 -0.47 16 25 N -0.58 0.22 6.07 -7.36 -0.04 0.17 16 26 C -0.13 0.52 5.61 -26.73 -0.15 0.37 16 27 C -0.11 0.41 4.96 -26.73 -0.13 0.28 16 28 H 0.06 -0.07 8.13 -51.93 -0.42 -0.49 16 29 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 30 H 0.10 -0.36 8.14 -51.93 -0.42 -0.79 16 31 H 0.07 0.00 7.56 -51.93 -0.39 -0.39 16 32 H 0.08 0.00 8.10 -51.93 -0.42 -0.42 16 33 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 34 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 35 H 0.39 -1.35 5.92 -40.82 -0.24 -1.59 16 36 H 0.16 0.20 8.06 -52.49 -0.42 -0.22 16 37 H 0.13 -0.21 8.06 -52.49 -0.42 -0.64 16 38 H 0.13 -0.27 4.82 -52.49 -0.25 -0.53 16 39 H 0.11 0.00 7.96 -51.93 -0.41 -0.42 16 40 H 0.38 -1.37 8.70 45.56 0.40 -0.97 16 41 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 42 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 43 H 0.13 -0.02 8.06 -52.49 -0.42 -0.44 16 44 H 0.42 -1.31 8.12 -40.82 -0.33 -1.64 16 45 H 0.09 -0.44 8.14 -51.93 -0.42 -0.86 16 46 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 47 H 0.09 -0.33 8.11 -51.93 -0.42 -0.75 16 48 H 0.06 -0.24 6.51 -51.93 -0.34 -0.58 16 LS Contribution 391.27 15.07 5.90 5.90 Total: 0.00 -9.78 391.27 -10.75 -20.53 By element: Atomic # 1 Polarization: -7.69 SS G_CDS: -6.66 Total: -14.34 kcal Atomic # 6 Polarization: 2.16 SS G_CDS: -3.59 Total: -1.43 kcal Atomic # 7 Polarization: 1.30 SS G_CDS: -0.28 Total: 1.02 kcal Atomic # 8 Polarization: -4.76 SS G_CDS: -1.07 Total: -5.83 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: -5.06 Total: -5.84 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -9.78 -10.75 -20.53 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14474850_13158378.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.221 kcal (2) G-P(sol) polarization free energy of solvation -9.777 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.998 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.749 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.526 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.747 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds