Wall clock time and date at job start Tue Mar 9 2021 13:17:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45194 * 1 3 3 C 1.34228 * 116.99805 * 2 1 4 4 O 1.20833 * 120.00354 * 359.97438 * 3 2 1 5 5 C 1.50703 * 120.00073 * 179.97438 * 3 2 1 6 6 H 1.08998 * 109.47150 * 60.00295 * 5 3 2 7 7 C 1.53006 * 109.46982 * 180.02562 * 5 3 2 8 8 C 1.53004 * 109.46774 * 179.97438 * 7 5 3 9 9 C 1.52996 * 109.47162 * 299.99904 * 8 7 5 10 10 H 1.09000 * 109.47009 * 180.02562 * 9 8 7 11 11 N 1.46499 * 109.47069 * 300.00079 * 9 8 7 12 12 C 1.34777 * 120.00387 * 205.00069 * 11 9 8 13 13 O 1.21593 * 119.99795 * 0.02562 * 12 11 9 14 14 C 1.47602 * 120.00626 * 179.97438 * 12 11 9 15 15 C 1.39713 * 120.08402 * 0.25051 * 14 12 11 16 16 C 1.37720 * 119.91069 * 180.27779 * 15 14 12 17 17 C 1.50703 * 119.95809 * 179.77209 * 16 15 14 18 18 C 1.38979 * 120.08608 * 359.49153 * 16 15 14 19 19 O 1.35707 * 119.91070 * 180.25371 * 18 16 15 20 20 C 1.39015 * 120.17539 * 0.23787 * 18 16 15 21 21 C 1.50704 * 119.95282 * 180.02562 * 20 18 16 22 22 O 1.42896 * 109.47192 * 284.99445 * 21 20 18 23 23 Si 1.86301 * 109.46797 * 164.99815 * 21 20 18 24 24 C 1.37685 * 120.08895 * 0.02562 * 20 18 16 25 25 C 1.52995 * 109.47289 * 60.00042 * 9 8 7 26 26 C 1.53000 * 109.46836 * 299.99849 * 5 3 2 27 27 H 1.08997 * 109.47787 * 300.00109 * 1 2 3 28 28 H 1.09001 * 109.46994 * 60.00340 * 1 2 3 29 29 H 1.09000 * 109.46811 * 179.97438 * 1 2 3 30 30 H 1.08998 * 109.47081 * 60.00077 * 7 5 3 31 31 H 1.09000 * 109.46797 * 299.99882 * 7 5 3 32 32 H 1.09001 * 109.46941 * 179.97438 * 8 7 5 33 33 H 1.08999 * 109.47076 * 59.99668 * 8 7 5 34 34 H 0.97000 * 119.99810 * 25.00254 * 11 9 8 35 35 H 1.08010 * 120.04790 * 0.02562 * 15 14 12 36 36 H 1.09002 * 109.47152 * 269.72132 * 17 16 15 37 37 H 1.09001 * 109.46980 * 149.72232 * 17 16 15 38 38 H 1.09004 * 109.47113 * 29.72213 * 17 16 15 39 39 H 0.96706 * 113.99973 * 90.00439 * 19 18 16 40 40 H 1.08996 * 109.46868 * 45.00051 * 21 20 18 41 41 H 0.96703 * 113.99865 * 179.97438 * 22 21 20 42 42 H 1.48498 * 110.00150 * 59.99990 * 23 21 20 43 43 H 1.48504 * 109.99957 * 181.31891 * 23 21 20 44 44 H 1.08000 * 120.04385 * 179.97438 * 24 20 18 45 45 H 1.08999 * 109.47288 * 60.00028 * 25 9 8 46 46 H 1.09005 * 109.47321 * 180.02562 * 25 9 8 47 47 H 1.08999 * 109.47270 * 299.99749 * 26 5 3 48 48 H 1.09003 * 109.46988 * 60.00530 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5662 1.2749 0.0006 6 1 3.9563 0.7807 -0.8891 7 6 4.0000 2.7423 0.0011 8 6 5.5279 2.8223 0.0023 9 6 6.0739 2.1287 1.2519 10 1 7.1624 2.1861 1.2530 11 7 5.5492 2.7926 2.4477 12 6 6.2294 2.7254 3.6093 13 8 7.2790 2.1140 3.6646 14 6 5.7010 3.3948 4.8140 15 6 4.4931 4.0943 4.7535 16 6 4.0063 4.7224 5.8783 17 6 2.7060 5.4816 5.8130 18 6 4.7095 4.6522 7.0750 19 8 4.2239 5.2682 8.1824 20 6 5.9089 3.9525 7.1406 21 6 6.6671 3.8791 8.4410 22 8 7.3096 5.1311 8.6890 23 14 7.9503 2.5326 8.3364 24 6 6.4050 3.3264 6.0192 25 6 5.6402 0.6615 1.2515 26 6 4.1128 0.5817 1.2502 27 1 -0.3634 0.5138 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 3.6099 3.2361 0.8910 31 1 3.6105 3.2365 -0.8889 32 1 5.8369 3.8676 0.0023 33 1 5.9183 2.3283 -0.8874 34 1 4.7120 3.2807 2.4035 35 1 3.9439 4.1459 3.8249 36 1 2.9044 6.5198 5.5466 37 1 2.2139 5.4435 6.7849 38 1 2.0593 5.0305 5.0603 39 1 3.6428 4.7118 8.7191 40 1 5.9746 3.6587 9.2533 41 1 7.8171 5.1566 9.5118 42 1 8.9006 2.8212 7.2324 43 1 8.6836 2.4287 9.6236 44 1 7.3371 2.7833 6.0709 45 1 6.0306 0.1674 0.3618 46 1 6.0289 0.1674 2.1420 47 1 3.7227 1.0760 2.1399 48 1 3.8038 -0.4637 1.2503 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14474850_13287732.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:17:13 Heat of formation + Delta-G solvation = -172.451834 kcal Electronic energy + Delta-G solvation = -31943.610788 eV Core-core repulsion = 27544.129949 eV Total energy + Delta-G solvation = -4399.480839 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.00807 -41.54239 -40.64842 -39.04779 -37.83938 -37.53783 -37.37857 -34.99658 -34.08031 -32.42011 -32.01672 -30.86251 -28.66634 -28.07011 -26.85405 -25.34886 -24.42982 -23.85719 -22.06633 -21.83320 -21.57613 -20.27812 -19.51321 -18.76055 -18.58371 -18.53659 -17.81181 -17.72855 -17.33478 -16.64986 -16.50934 -16.37681 -16.08613 -15.64914 -15.39080 -15.20109 -14.96230 -14.89298 -14.66599 -14.34950 -14.27899 -13.97508 -13.90199 -13.78057 -13.64397 -13.50329 -13.39929 -13.24401 -13.02838 -13.00696 -12.96250 -12.57433 -12.35716 -12.09283 -11.83092 -11.76029 -11.70709 -11.49987 -11.48595 -11.18072 -10.92299 -10.46752 -10.12800 -9.95183 -9.62609 -4.95766 -0.33845 0.09950 1.16574 1.24742 1.59787 1.67274 1.70801 1.98275 2.08582 2.61619 3.03314 3.29911 3.38106 3.47459 3.55425 3.58418 3.62936 3.73236 3.87542 3.93069 3.97864 4.06153 4.12734 4.13769 4.19485 4.20885 4.27077 4.28743 4.30686 4.38973 4.50241 4.56138 4.56702 4.64382 4.64656 4.68360 4.88038 4.91699 4.93007 5.01503 5.02736 5.10330 5.12344 5.13480 5.18211 5.29364 5.37481 5.45933 5.56747 6.43928 6.45434 6.57305 6.70931 7.20136 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.463 3.537 4 O -0.506 6.506 5 C -0.081 4.081 6 H 0.113 0.887 7 C -0.106 4.106 8 C -0.128 4.128 9 C 0.143 3.857 10 H 0.096 0.904 11 N -0.721 5.721 12 C 0.563 3.437 13 O -0.531 6.531 14 C -0.139 4.139 15 C -0.066 4.066 16 C -0.117 4.117 17 C -0.110 4.110 18 C 0.160 3.840 19 O -0.484 6.484 20 C -0.104 4.104 21 C -0.063 4.063 22 O -0.528 6.528 23 Si 0.677 3.323 24 C -0.047 4.047 25 C -0.130 4.130 26 C -0.110 4.110 27 H 0.063 0.937 28 H 0.063 0.937 29 H 0.103 0.897 30 H 0.069 0.931 31 H 0.080 0.920 32 H 0.079 0.921 33 H 0.086 0.914 34 H 0.399 0.601 35 H 0.131 0.869 36 H 0.076 0.924 37 H 0.071 0.929 38 H 0.069 0.931 39 H 0.392 0.608 40 H 0.075 0.925 41 H 0.379 0.621 42 H -0.250 1.250 43 H -0.258 1.258 44 H 0.145 0.855 45 H 0.080 0.920 46 H 0.078 0.922 47 H 0.068 0.932 48 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.318 -3.559 -0.190 5.599 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.306 3.694 4 O -0.393 6.393 5 C -0.100 4.100 6 H 0.131 0.869 7 C -0.144 4.144 8 C -0.166 4.166 9 C 0.038 3.962 10 H 0.114 0.886 11 N -0.374 5.374 12 C 0.350 3.650 13 O -0.408 6.408 14 C -0.142 4.142 15 C -0.085 4.085 16 C -0.118 4.118 17 C -0.166 4.166 18 C 0.114 3.886 19 O -0.294 6.294 20 C -0.105 4.105 21 C -0.173 4.173 22 O -0.335 6.335 23 Si 0.578 3.422 24 C -0.066 4.066 25 C -0.168 4.168 26 C -0.148 4.148 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.121 0.879 30 H 0.087 0.913 31 H 0.098 0.902 32 H 0.098 0.902 33 H 0.105 0.895 34 H 0.235 0.765 35 H 0.149 0.851 36 H 0.094 0.906 37 H 0.090 0.910 38 H 0.088 0.912 39 H 0.249 0.751 40 H 0.093 0.907 41 H 0.227 0.773 42 H -0.174 1.174 43 H -0.183 1.183 44 H 0.163 0.837 45 H 0.098 0.902 46 H 0.097 0.903 47 H 0.086 0.914 48 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -2.908 -3.284 -0.892 4.476 hybrid contribution -0.724 0.929 0.834 1.443 sum -3.632 -2.355 -0.058 4.329 Atomic orbital electron populations 1.23311 0.75989 1.03990 1.02667 1.86511 1.23673 1.33360 1.83840 1.23842 0.92068 0.81407 0.72099 1.90687 1.67233 1.36367 1.45054 1.21170 0.86891 0.99418 1.02485 0.86884 1.21463 0.95589 0.93466 1.03867 1.21873 0.94902 1.02098 0.97688 1.21035 0.99850 0.91715 0.83568 0.88588 1.46054 1.26408 1.55351 1.09619 1.18118 0.83974 0.79906 0.82980 1.90810 1.22549 1.42578 1.84904 1.19793 0.96928 1.03163 0.94309 1.21088 0.94364 0.95124 0.97925 1.20177 0.98295 1.00242 0.93072 1.20695 0.92820 0.99892 1.03235 1.18305 0.91897 0.91414 0.86959 1.84817 1.67710 1.41013 1.35892 1.19544 0.96164 0.99773 0.95000 1.24568 1.01988 0.94400 0.96308 1.86640 1.68959 1.31905 1.46028 0.95093 0.81187 0.85074 0.80823 1.21082 0.98959 0.96269 0.90272 1.21938 0.94794 0.96254 1.03812 1.21504 0.96197 1.01368 0.95682 0.91791 0.91778 0.87869 0.91253 0.90169 0.90224 0.89529 0.76451 0.85149 0.90568 0.90990 0.91173 0.75063 0.90750 0.77287 1.17424 1.18250 0.83736 0.90170 0.90293 0.91354 0.90118 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.22 10.47 -39.25 -0.41 -0.63 16 3 C 0.46 0.40 7.26 36.01 0.26 0.66 16 4 O -0.51 -1.80 15.73 -18.76 -0.30 -2.10 16 5 C -0.08 0.15 2.63 -91.77 -0.24 -0.09 16 6 H 0.11 -0.36 8.14 -51.93 -0.42 -0.79 16 7 C -0.11 0.24 4.32 -26.73 -0.12 0.12 16 8 C -0.13 0.39 5.61 -26.73 -0.15 0.24 16 9 C 0.14 -0.20 2.78 -67.94 -0.19 -0.39 16 10 H 0.10 0.01 7.58 -51.93 -0.39 -0.38 16 11 N -0.72 0.51 4.18 -54.83 -0.23 0.28 16 12 C 0.56 1.28 7.73 -12.44 -0.10 1.18 16 13 O -0.53 -2.98 16.00 5.28 0.08 -2.89 16 14 C -0.14 -0.23 5.87 -104.96 -0.62 -0.85 16 15 C -0.07 0.01 9.18 -39.22 -0.36 -0.35 16 16 C -0.12 -0.04 5.89 -104.54 -0.62 -0.65 16 17 C -0.11 0.15 9.79 36.01 0.35 0.51 16 18 C 0.16 0.21 6.66 -39.02 -0.26 -0.05 16 19 O -0.48 -0.18 11.84 -18.83 -0.22 -0.41 16 20 C -0.10 -0.19 5.30 -104.53 -0.55 -0.75 16 21 C -0.06 -0.04 2.36 36.01 0.09 0.04 16 22 O -0.53 -1.30 12.86 -35.23 -0.45 -1.75 16 23 Si 0.68 0.18 30.19 -169.99 -5.13 -4.95 16 24 C -0.05 -0.12 8.20 -39.22 -0.32 -0.44 16 25 C -0.13 0.24 5.60 -26.76 -0.15 0.09 16 26 C -0.11 0.22 4.97 -26.75 -0.13 0.09 16 27 H 0.06 -0.07 8.13 -51.93 -0.42 -0.49 16 28 H 0.06 -0.06 8.13 -51.93 -0.42 -0.49 16 29 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 30 H 0.07 -0.14 6.46 -51.93 -0.34 -0.47 16 31 H 0.08 -0.13 8.10 -51.93 -0.42 -0.55 16 32 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 33 H 0.09 -0.34 8.14 -51.93 -0.42 -0.77 16 34 H 0.40 -0.95 4.89 -40.82 -0.20 -1.15 16 35 H 0.13 -0.34 6.40 -52.48 -0.34 -0.68 16 36 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 37 H 0.07 -0.14 7.52 -51.93 -0.39 -0.53 16 38 H 0.07 -0.18 8.08 -51.93 -0.42 -0.60 16 39 H 0.39 -1.75 9.06 45.56 0.41 -1.33 16 40 H 0.07 -0.12 7.82 -51.93 -0.41 -0.52 16 41 H 0.38 -0.63 8.74 45.56 0.40 -0.23 16 42 H -0.25 -0.99 6.75 56.52 0.38 -0.61 16 43 H -0.26 -0.46 7.11 56.52 0.40 -0.06 16 44 H 0.15 0.43 4.47 -52.49 -0.23 0.19 16 45 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 46 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 47 H 0.07 -0.10 7.60 -51.93 -0.39 -0.49 16 48 H 0.08 -0.16 8.11 -51.93 -0.42 -0.58 16 LS Contribution 387.93 15.07 5.85 5.85 Total: 0.00 -10.74 387.93 -9.01 -19.75 By element: Atomic # 1 Polarization: -7.39 SS G_CDS: -6.16 Total: -13.55 kcal Atomic # 6 Polarization: 2.43 SS G_CDS: -2.04 Total: 0.39 kcal Atomic # 7 Polarization: 0.51 SS G_CDS: -0.23 Total: 0.28 kcal Atomic # 8 Polarization: -6.48 SS G_CDS: -1.30 Total: -7.78 kcal Atomic # 14 Polarization: 0.18 SS G_CDS: -5.13 Total: -4.95 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -10.74 -9.01 -19.75 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14474850_13287732.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -152.700 kcal (2) G-P(sol) polarization free energy of solvation -10.740 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -163.439 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.012 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.752 kcal (6) G-S(sol) free energy of system = (1) + (5) -172.452 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds