Wall clock time and date at job start Tue Mar 9 2021 13:17:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34227 * 116.99565 * 2 1 4 4 O 1.20828 * 120.00451 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99998 * 179.97438 * 3 2 1 6 6 H 1.09001 * 109.47111 * 60.00195 * 5 3 2 7 7 C 1.52998 * 109.47330 * 179.97438 * 5 3 2 8 8 C 1.53001 * 109.47241 * 179.97438 * 7 5 3 9 9 C 1.53003 * 109.46939 * 300.00175 * 8 7 5 10 10 H 1.09007 * 109.46782 * 179.97438 * 9 8 7 11 11 N 1.46499 * 109.47311 * 299.99633 * 9 8 7 12 12 C 1.34775 * 120.00209 * 204.99739 * 11 9 8 13 13 O 1.21552 * 119.99627 * 0.02562 * 12 11 9 14 14 C 1.47837 * 120.00307 * 180.02562 * 12 11 9 15 15 C 1.39526 * 120.55593 * 0.02562 * 14 12 11 16 16 N 1.31695 * 120.56541 * 180.25698 * 15 14 12 17 17 C 1.31930 * 121.87674 * 359.42716 * 16 15 14 18 18 C 1.38355 * 121.07934 * 0.57491 * 17 16 15 19 19 C 1.50702 * 120.34744 * 179.74430 * 18 17 16 20 20 O 1.42899 * 109.47080 * 244.97911 * 19 18 17 21 21 Si 1.86297 * 109.47156 * 4.97673 * 19 18 17 22 22 C 1.38354 * 119.30303 * 359.71993 * 18 17 16 23 23 C 1.53003 * 109.46929 * 60.00224 * 9 8 7 24 24 C 1.52996 * 109.47158 * 299.99322 * 23 9 8 25 25 H 1.08990 * 109.47576 * 299.99489 * 1 2 3 26 26 H 1.09007 * 109.47308 * 60.00120 * 1 2 3 27 27 H 1.09003 * 109.46545 * 179.97438 * 1 2 3 28 28 H 1.09001 * 109.46786 * 60.00092 * 7 5 3 29 29 H 1.09001 * 109.47062 * 300.00303 * 7 5 3 30 30 H 1.08999 * 109.46866 * 180.02562 * 8 7 5 31 31 H 1.08992 * 109.46940 * 60.00483 * 8 7 5 32 32 H 0.96996 * 119.99717 * 25.00745 * 11 9 8 33 33 H 1.08002 * 119.71532 * 359.97295 * 15 14 12 34 34 H 1.08000 * 119.46084 * 180.29571 * 17 16 15 35 35 H 1.09000 * 109.46874 * 124.97408 * 19 18 17 36 36 H 0.96698 * 114.00124 * 60.00028 * 20 19 18 37 37 H 1.48504 * 110.00137 * 58.68089 * 21 19 18 38 38 H 1.48502 * 110.00042 * 179.97438 * 21 19 18 39 39 H 1.08004 * 120.85655 * 179.97438 * 22 18 17 40 40 H 1.09001 * 109.47268 * 59.99782 * 23 9 8 41 41 H 1.09001 * 109.46695 * 179.97438 * 23 9 8 42 42 H 1.09001 * 109.47105 * 300.00831 * 24 23 9 43 43 H 1.08997 * 109.47600 * 179.97438 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2094 0.0005 5 6 3.5662 1.2750 0.0006 6 1 3.9564 0.7808 -0.8892 7 6 4.0000 2.7422 -0.0002 8 6 5.5279 2.8224 0.0011 9 6 6.0739 2.1298 1.2513 10 1 7.1625 2.1865 1.2519 11 7 5.5491 2.7947 2.4465 12 6 6.2293 2.7284 3.6081 13 8 7.2785 2.1171 3.6639 14 6 5.6995 3.3990 4.8144 15 6 4.4961 4.1033 4.7637 16 7 4.0265 4.7049 5.8369 17 6 4.6586 4.6594 6.9940 18 6 5.8575 3.9818 7.1266 19 6 6.5686 3.9453 8.4549 20 8 7.8155 4.6348 8.3468 21 14 5.5121 4.7716 9.7478 22 6 6.3965 3.3376 6.0272 23 6 5.6402 0.6625 1.2519 24 6 4.1123 0.5823 1.2508 25 1 -0.3634 0.5137 0.8899 26 1 -0.3634 0.5138 -0.8900 27 1 -0.3632 -1.0277 -0.0005 28 1 3.6098 3.2368 0.8893 29 1 3.6106 3.2357 -0.8906 30 1 5.8368 3.8677 0.0010 31 1 5.9183 2.3277 -0.8882 32 1 4.7120 3.2827 2.4019 33 1 3.9474 4.1593 3.8351 34 1 4.2356 5.1632 7.8505 35 1 6.7498 2.9094 8.7416 36 1 7.7303 5.5643 8.0942 37 1 4.2000 4.0833 9.8474 38 1 6.2019 4.7417 11.0625 39 1 7.3311 2.8015 6.1024 40 1 6.0307 0.1678 0.3626 41 1 6.0295 0.1690 2.1424 42 1 3.7218 1.0771 2.1401 43 1 3.8032 -0.4629 1.2508 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14474850_13287814.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:17:44 Heat of formation + Delta-G solvation = -117.094496 kcal Electronic energy + Delta-G solvation = -27372.887425 eV Core-core repulsion = 23384.600960 eV Total energy + Delta-G solvation = -3988.286465 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.145 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -42.13899 -41.68985 -40.67046 -38.99722 -37.98766 -37.45569 -35.09203 -33.78186 -33.30824 -32.07499 -31.26434 -28.69335 -27.34192 -26.05223 -24.73492 -23.94449 -23.86250 -22.14830 -21.71180 -20.35619 -19.38707 -18.63828 -18.16482 -18.08294 -17.80564 -17.70135 -17.38273 -16.67832 -16.49277 -16.32509 -16.02717 -15.60669 -15.31093 -15.02843 -14.91658 -14.56675 -14.40564 -14.29338 -14.22849 -13.96020 -13.79496 -13.57820 -13.44258 -13.28680 -13.01550 -12.76980 -12.40648 -12.16458 -12.14357 -11.84691 -11.74056 -11.54487 -11.33978 -11.21121 -11.05633 -10.64183 -10.57573 -10.38123 -10.15764 -5.16965 -0.59808 -0.04362 1.11077 1.15480 1.50852 1.65965 1.71083 1.85086 1.96102 2.61636 2.99288 3.28436 3.34630 3.36498 3.44150 3.52027 3.58593 3.66294 3.71874 3.81689 3.88422 4.02528 4.07400 4.12044 4.13334 4.19400 4.20777 4.23374 4.24671 4.39904 4.45342 4.55648 4.61576 4.78348 4.82980 4.87022 4.88211 4.90852 4.98834 5.06685 5.11815 5.26359 5.34984 5.39565 6.30380 6.41640 6.60309 6.69876 7.05218 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.462 3.538 4 O -0.505 6.505 5 C -0.081 4.081 6 H 0.114 0.886 7 C -0.107 4.107 8 C -0.128 4.128 9 C 0.143 3.857 10 H 0.097 0.903 11 N -0.719 5.719 12 C 0.566 3.434 13 O -0.527 6.527 14 C -0.189 4.189 15 C 0.139 3.861 16 N -0.477 5.477 17 C 0.129 3.871 18 C -0.179 4.179 19 C -0.064 4.064 20 O -0.536 6.536 21 Si 0.686 3.314 22 C 0.012 3.988 23 C -0.130 4.130 24 C -0.110 4.110 25 H 0.064 0.936 26 H 0.064 0.936 27 H 0.103 0.897 28 H 0.069 0.931 29 H 0.081 0.919 30 H 0.080 0.920 31 H 0.087 0.913 32 H 0.399 0.601 33 H 0.160 0.840 34 H 0.163 0.837 35 H 0.120 0.880 36 H 0.380 0.620 37 H -0.253 1.253 38 H -0.248 1.248 39 H 0.152 0.848 40 H 0.081 0.919 41 H 0.077 0.923 42 H 0.067 0.933 43 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.539 1.096 -1.833 2.632 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.305 3.695 4 O -0.392 6.392 5 C -0.100 4.100 6 H 0.132 0.868 7 C -0.144 4.144 8 C -0.165 4.165 9 C 0.039 3.961 10 H 0.115 0.885 11 N -0.373 5.373 12 C 0.352 3.648 13 O -0.404 6.404 14 C -0.194 4.194 15 C -0.020 4.020 16 N -0.184 5.184 17 C -0.027 4.027 18 C -0.182 4.182 19 C -0.175 4.175 20 O -0.341 6.341 21 Si 0.587 3.413 22 C -0.014 4.014 23 C -0.168 4.168 24 C -0.148 4.148 25 H 0.082 0.918 26 H 0.083 0.917 27 H 0.121 0.879 28 H 0.088 0.912 29 H 0.100 0.900 30 H 0.099 0.901 31 H 0.106 0.894 32 H 0.236 0.764 33 H 0.177 0.823 34 H 0.180 0.820 35 H 0.137 0.863 36 H 0.228 0.772 37 H -0.177 1.177 38 H -0.173 1.173 39 H 0.170 0.830 40 H 0.100 0.900 41 H 0.096 0.904 42 H 0.086 0.914 43 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -2.006 0.727 -0.937 2.331 hybrid contribution 0.136 -0.754 -0.369 0.851 sum -1.870 -0.027 -1.306 2.281 Atomic orbital electron populations 1.23317 0.75941 1.03999 1.02707 1.86508 1.23715 1.33358 1.83843 1.23826 0.92056 0.81432 0.72169 1.90691 1.67213 1.36345 1.44971 1.21166 0.86956 0.99426 1.02411 0.86848 1.21470 0.95539 0.93466 1.03975 1.21876 0.94937 1.02128 0.97590 1.21061 0.99868 0.91698 0.83476 0.88488 1.46056 1.26333 1.55226 1.09642 1.17992 0.84034 0.79995 0.82771 1.90819 1.22497 1.42326 1.84721 1.21053 0.98516 1.04171 0.95630 1.23027 0.91501 0.90274 0.97152 1.67722 1.33149 1.18526 0.99018 1.22879 0.90656 0.93688 0.95473 1.21438 0.97640 1.01215 0.97887 1.25023 0.91639 1.02125 0.98743 1.86549 1.27480 1.27857 1.92191 0.94867 0.77996 0.89898 0.78529 1.21631 0.98191 0.91963 0.89652 1.21949 0.94841 0.96220 1.03833 1.21513 0.96130 1.01436 0.95718 0.91768 0.91732 0.87873 0.91213 0.90049 0.90118 0.89437 0.76421 0.82341 0.82025 0.86303 0.77202 1.17744 1.17261 0.83017 0.90044 0.90434 0.91438 0.90103 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.31 10.47 -39.25 -0.41 -0.72 16 3 C 0.46 0.47 7.25 36.01 0.26 0.73 16 4 O -0.50 -1.88 15.73 -18.75 -0.29 -2.18 16 5 C -0.08 0.16 2.63 -91.77 -0.24 -0.08 16 6 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 7 C -0.11 0.27 4.32 -26.73 -0.12 0.16 16 8 C -0.13 0.45 5.61 -26.73 -0.15 0.30 16 9 C 0.14 -0.28 2.78 -67.93 -0.19 -0.46 16 10 H 0.10 -0.05 7.58 -51.93 -0.39 -0.44 16 11 N -0.72 1.05 4.19 -54.75 -0.23 0.82 16 12 C 0.57 0.76 7.75 -12.33 -0.10 0.66 16 13 O -0.53 -2.55 16.08 5.32 0.09 -2.47 16 14 C -0.19 -0.11 5.89 -104.82 -0.62 -0.73 16 15 C 0.14 -0.04 10.71 -17.13 -0.18 -0.23 16 16 N -0.48 -0.41 10.35 -12.91 -0.13 -0.54 16 17 C 0.13 -0.07 9.84 -17.47 -0.17 -0.24 16 18 C -0.18 0.08 5.35 -104.54 -0.56 -0.48 16 19 C -0.06 0.07 2.82 36.01 0.10 0.17 16 20 O -0.54 0.26 12.84 -35.23 -0.45 -0.20 16 21 Si 0.69 -1.46 29.83 -169.99 -5.07 -6.53 16 22 C 0.01 0.01 9.38 -38.87 -0.36 -0.35 16 23 C -0.13 0.26 5.60 -26.73 -0.15 0.11 16 24 C -0.11 0.22 4.98 -26.73 -0.13 0.09 16 25 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 26 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 27 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 28 H 0.07 -0.16 6.46 -51.93 -0.34 -0.50 16 29 H 0.08 -0.15 8.10 -51.93 -0.42 -0.57 16 30 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 31 H 0.09 -0.39 8.14 -51.93 -0.42 -0.81 16 32 H 0.40 -1.25 4.93 -40.82 -0.20 -1.46 16 33 H 0.16 -0.47 6.42 -52.49 -0.34 -0.81 16 34 H 0.16 -0.47 4.91 -52.49 -0.26 -0.73 16 35 H 0.12 -0.09 7.96 -51.93 -0.41 -0.50 16 36 H 0.38 -1.68 8.70 45.56 0.40 -1.28 16 37 H -0.25 -0.04 7.11 56.52 0.40 0.36 16 38 H -0.25 -0.30 7.11 56.52 0.40 0.11 16 39 H 0.15 0.24 7.74 -52.48 -0.41 -0.17 16 40 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 41 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 42 H 0.07 -0.09 7.60 -51.93 -0.39 -0.49 16 43 H 0.08 -0.14 8.11 -51.93 -0.42 -0.56 16 LS Contribution 352.80 15.07 5.32 5.32 Total: 0.00 -9.48 352.80 -8.49 -17.97 By element: Atomic # 1 Polarization: -6.38 SS G_CDS: -5.76 Total: -12.15 kcal Atomic # 6 Polarization: 2.21 SS G_CDS: -1.54 Total: 0.67 kcal Atomic # 7 Polarization: 0.64 SS G_CDS: -0.36 Total: 0.28 kcal Atomic # 8 Polarization: -4.48 SS G_CDS: -1.07 Total: -5.55 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: -5.07 Total: -6.53 kcal Total LS contribution 5.32 Total: 5.32 kcal Total: -9.48 -8.49 -17.97 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14474850_13287814.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.124 kcal (2) G-P(sol) polarization free energy of solvation -9.476 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.600 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.495 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.970 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.094 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds