Wall clock time and date at job start Tue Mar 9 2021 13:17:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34228 * 117.00436 * 2 1 4 4 O 1.20826 * 120.00050 * 359.97438 * 3 2 1 5 5 C 1.50701 * 120.00108 * 179.97438 * 3 2 1 6 6 H 1.08992 * 109.47284 * 300.00185 * 5 3 2 7 7 C 1.53002 * 109.46958 * 60.00103 * 5 3 2 8 8 C 1.52997 * 109.46978 * 180.02562 * 7 5 3 9 9 C 1.53006 * 109.47164 * 299.99874 * 8 7 5 10 10 H 1.08996 * 109.46884 * 180.02562 * 9 8 7 11 11 N 1.46497 * 109.46631 * 300.00053 * 9 8 7 12 12 C 1.34780 * 120.00425 * 274.99731 * 11 9 8 13 13 O 1.21618 * 119.99378 * 359.97438 * 12 11 9 14 14 C 1.47374 * 120.00550 * 180.02562 * 12 11 9 15 15 C 1.36421 * 127.19492 * 179.70732 * 14 12 11 16 16 C 1.50701 * 125.79969 * 0.02562 * 15 14 12 17 17 O 1.33647 * 108.39362 * 179.89547 * 15 14 12 18 18 C 1.34208 * 110.91210 * 0.38852 * 17 15 14 19 19 C 1.50707 * 125.43472 * 179.76151 * 18 17 15 20 20 O 1.42895 * 109.46953 * 244.99789 * 19 18 17 21 21 Si 1.86294 * 109.47506 * 5.00120 * 19 18 17 22 22 C 1.34176 * 109.12740 * 359.76223 * 18 17 15 23 23 C 1.52997 * 109.47127 * 59.99836 * 9 8 7 24 24 C 1.52996 * 109.46990 * 179.97438 * 5 3 2 25 25 H 1.09001 * 109.46755 * 59.99811 * 1 2 3 26 26 H 1.08993 * 109.47498 * 180.02562 * 1 2 3 27 27 H 1.09006 * 109.46924 * 300.00276 * 1 2 3 28 28 H 1.09002 * 109.47097 * 299.99808 * 7 5 3 29 29 H 1.09001 * 109.47142 * 59.99773 * 7 5 3 30 30 H 1.09001 * 109.47375 * 59.99908 * 8 7 5 31 31 H 1.09000 * 109.47140 * 179.97438 * 8 7 5 32 32 H 0.97006 * 120.00119 * 95.00205 * 11 9 8 33 33 H 1.08998 * 109.46746 * 89.99628 * 16 15 14 34 34 H 1.08992 * 109.47162 * 210.00167 * 16 15 14 35 35 H 1.09006 * 109.46827 * 330.00200 * 16 15 14 36 36 H 1.08999 * 109.46751 * 125.00198 * 19 18 17 37 37 H 0.96701 * 114.00230 * 180.02562 * 20 19 18 38 38 H 1.48502 * 109.99821 * 300.00209 * 21 19 18 39 39 H 1.48500 * 110.00020 * 61.31361 * 21 19 18 40 40 H 1.07996 * 127.02293 * 180.02562 * 22 18 17 41 41 H 1.09002 * 109.47153 * 180.02562 * 23 9 8 42 42 H 1.09001 * 109.46832 * 60.00321 * 23 9 8 43 43 H 1.09004 * 109.47368 * 60.00232 * 24 5 3 44 44 H 1.09001 * 109.47372 * 300.00388 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4035 2.2093 -0.0005 5 6 3.5664 1.2747 0.0006 6 1 3.9558 0.7808 0.8907 7 6 4.1139 0.5809 -1.2483 8 6 5.6418 0.6603 -1.2474 9 6 6.0762 2.1274 -1.2472 10 1 7.1647 2.1839 -1.2470 11 7 5.5534 2.7915 -2.4438 12 6 6.2352 2.7240 -3.6044 13 8 7.2849 2.1121 -3.6582 14 6 5.7096 3.3926 -4.8079 15 6 6.2769 3.4238 -6.0482 16 6 7.5762 2.7687 -6.4400 17 8 5.4830 4.1318 -6.8574 18 6 4.4056 4.5833 -6.1966 19 6 3.3026 5.4199 -6.7920 20 8 3.2983 6.7098 -6.1771 21 14 3.5842 5.6063 -8.6240 22 6 4.4673 4.1708 -4.9213 23 6 5.5287 2.8212 0.0016 24 6 4.0003 2.7419 -0.0002 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5139 0.8900 28 1 3.8048 -0.4644 -1.2482 29 1 3.7245 1.0748 -2.1386 30 1 6.0308 0.1661 -0.3572 31 1 6.0319 0.1656 -2.1369 32 1 4.7164 3.2800 -2.4007 33 1 7.3811 1.7545 -6.7885 34 1 8.0465 3.3430 -7.2381 35 1 8.2408 2.7346 -5.5766 36 1 2.3432 4.9321 -6.6196 37 1 2.6120 7.3030 -6.5121 38 1 4.8892 6.2701 -8.8723 39 1 3.5593 4.2741 -9.2798 40 1 3.7507 4.3695 -4.1382 41 1 5.8378 3.8665 0.0015 42 1 5.9178 2.3270 0.8918 43 1 3.6102 3.2366 0.8893 44 1 3.6109 3.2355 -0.8906 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14474850_13308374.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:17:53 Heat of formation + Delta-G solvation = -142.658082 kcal Electronic energy + Delta-G solvation = -28427.408779 eV Core-core repulsion = 24312.983654 eV Total energy + Delta-G solvation = -4114.425125 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -43.73431 -41.86573 -40.79082 -38.92568 -37.99874 -37.42392 -34.91791 -34.08737 -33.20307 -32.00924 -31.41802 -29.43205 -28.64212 -25.95424 -24.97802 -24.09196 -23.83809 -22.47116 -21.67880 -20.74970 -20.19370 -18.81615 -18.59159 -18.44196 -17.80230 -17.49335 -17.27441 -17.04312 -16.65830 -16.33158 -15.88896 -15.75783 -15.43133 -15.08545 -14.86238 -14.69708 -14.32421 -14.18775 -14.12115 -14.05135 -13.93770 -13.84042 -13.72340 -13.37834 -13.21003 -13.10976 -12.98963 -12.55937 -12.34097 -12.09978 -12.07330 -11.81566 -11.69029 -11.47111 -11.16450 -10.93345 -10.85000 -10.54359 -10.04757 -9.53410 -5.13992 0.31420 0.84028 1.09522 1.18332 1.50392 1.63165 1.68928 1.98534 2.20952 2.39647 3.19262 3.40233 3.49944 3.51810 3.58419 3.72758 3.76425 3.90667 3.95345 4.07850 4.10639 4.14887 4.17952 4.21962 4.22784 4.29532 4.30893 4.41735 4.52158 4.54355 4.57410 4.64446 4.67564 4.79903 4.90973 4.94121 4.95876 5.04688 5.11029 5.14885 5.18613 5.23467 5.39313 5.53490 5.94584 6.40918 6.53049 6.72631 7.27491 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.463 3.537 4 O -0.506 6.506 5 C -0.080 4.080 6 H 0.113 0.887 7 C -0.110 4.110 8 C -0.129 4.129 9 C 0.144 3.856 10 H 0.095 0.905 11 N -0.718 5.718 12 C 0.595 3.405 13 O -0.539 6.539 14 C -0.252 4.252 15 C 0.094 3.906 16 C -0.086 4.086 17 O -0.176 6.176 18 C -0.014 4.014 19 C -0.035 4.035 20 O -0.543 6.543 21 Si 0.709 3.291 22 C -0.143 4.143 23 C -0.127 4.127 24 C -0.106 4.106 25 H 0.063 0.937 26 H 0.103 0.897 27 H 0.064 0.936 28 H 0.079 0.921 29 H 0.067 0.933 30 H 0.079 0.921 31 H 0.077 0.923 32 H 0.400 0.600 33 H 0.092 0.908 34 H 0.080 0.920 35 H 0.113 0.887 36 H 0.095 0.905 37 H 0.391 0.609 38 H -0.249 1.249 39 H -0.253 1.253 40 H 0.159 0.841 41 H 0.079 0.921 42 H 0.086 0.914 43 H 0.079 0.921 44 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.909 0.151 -0.317 3.924 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.306 3.694 4 O -0.393 6.393 5 C -0.099 4.099 6 H 0.131 0.869 7 C -0.148 4.148 8 C -0.168 4.168 9 C 0.040 3.960 10 H 0.113 0.887 11 N -0.370 5.370 12 C 0.384 3.616 13 O -0.418 6.418 14 C -0.256 4.256 15 C 0.041 3.959 16 C -0.142 4.142 17 O -0.073 6.073 18 C -0.061 4.061 19 C -0.145 4.145 20 O -0.351 6.351 21 Si 0.608 3.392 22 C -0.162 4.162 23 C -0.165 4.165 24 C -0.144 4.144 25 H 0.082 0.918 26 H 0.121 0.879 27 H 0.082 0.918 28 H 0.098 0.902 29 H 0.086 0.914 30 H 0.098 0.902 31 H 0.096 0.904 32 H 0.236 0.764 33 H 0.110 0.890 34 H 0.098 0.902 35 H 0.131 0.869 36 H 0.113 0.887 37 H 0.240 0.760 38 H -0.173 1.173 39 H -0.177 1.177 40 H 0.176 0.824 41 H 0.098 0.902 42 H 0.104 0.896 43 H 0.098 0.902 44 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -2.339 -0.394 -0.990 2.570 hybrid contribution -0.869 0.031 0.786 1.172 sum -3.208 -0.363 -0.203 3.235 Atomic orbital electron populations 1.23311 0.76003 1.03972 1.02669 1.86510 1.23670 1.33388 1.83863 1.23842 0.92073 0.81400 0.72105 1.90685 1.67226 1.36359 1.45022 1.21163 0.86878 0.99448 1.02414 0.86903 1.21507 0.96212 1.01291 0.95741 1.21943 0.94780 0.96348 1.03689 1.21016 0.99778 0.91636 0.83616 0.88654 1.45918 1.26405 1.55295 1.09415 1.17116 0.83395 0.79099 0.82019 1.90770 1.22784 1.43242 1.84960 1.21138 0.99202 1.10144 0.95130 1.22946 0.92809 0.92532 0.87652 1.20706 0.88956 0.99849 1.04655 1.83687 1.28675 1.54891 1.40078 1.21042 0.90000 1.03107 0.91989 1.23800 0.95117 0.85484 1.10102 1.86464 1.59630 1.22798 1.66176 0.95273 0.85694 0.84361 0.73902 1.22548 0.97732 0.99608 0.96342 1.21876 0.94904 1.02075 0.97645 1.21470 0.95595 0.93426 1.03901 0.91809 0.87880 0.91756 0.90199 0.91397 0.90203 0.90445 0.76432 0.88955 0.90154 0.86859 0.88743 0.76018 1.17280 1.17700 0.82370 0.90234 0.89556 0.90187 0.91180 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.46 10.47 -39.25 -0.41 -0.87 16 3 C 0.46 0.75 7.26 36.01 0.26 1.01 16 4 O -0.51 -2.18 15.73 -18.75 -0.29 -2.47 16 5 C -0.08 0.09 2.63 -91.77 -0.24 -0.15 16 6 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 7 C -0.11 0.12 4.98 -26.73 -0.13 -0.02 16 8 C -0.13 0.13 5.60 -26.73 -0.15 -0.02 16 9 C 0.14 -0.09 2.78 -67.93 -0.19 -0.28 16 10 H 0.10 0.07 7.57 -51.93 -0.39 -0.33 16 11 N -0.72 -0.36 4.23 -54.90 -0.23 -0.60 16 12 C 0.60 1.99 7.78 -12.54 -0.10 1.89 16 13 O -0.54 -3.04 14.51 5.26 0.08 -2.96 16 14 C -0.25 -0.87 6.31 -103.28 -0.65 -1.52 16 15 C 0.09 0.34 7.37 -34.96 -0.26 0.09 16 16 C -0.09 -0.12 9.89 36.01 0.36 0.23 16 17 O -0.18 -0.75 8.90 7.68 0.07 -0.68 16 18 C -0.01 -0.04 6.22 -35.74 -0.22 -0.26 16 19 C -0.04 0.01 2.96 36.01 0.11 0.12 16 20 O -0.54 0.25 12.86 -35.23 -0.45 -0.20 16 21 Si 0.71 -0.66 32.09 -169.99 -5.46 -6.11 16 22 C -0.14 -0.34 10.48 -37.45 -0.39 -0.73 16 23 C -0.13 0.29 5.61 -26.71 -0.15 0.14 16 24 C -0.11 0.15 4.32 -26.71 -0.12 0.03 16 25 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 26 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 27 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 28 H 0.08 -0.08 8.11 -51.93 -0.42 -0.50 16 29 H 0.07 -0.01 7.61 -51.93 -0.39 -0.40 16 30 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 31 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 32 H 0.40 -0.28 6.04 -40.82 -0.25 -0.53 16 33 H 0.09 0.03 8.14 -51.93 -0.42 -0.39 16 34 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.11 0.25 6.49 -51.93 -0.34 -0.09 16 36 H 0.09 -0.27 7.96 -51.93 -0.41 -0.68 16 37 H 0.39 -2.31 8.74 45.56 0.40 -1.91 16 38 H -0.25 -0.74 7.11 56.52 0.40 -0.34 16 39 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 40 H 0.16 0.02 7.74 -52.49 -0.41 -0.39 16 41 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 42 H 0.09 -0.29 8.14 -51.93 -0.42 -0.72 16 43 H 0.08 -0.07 8.10 -51.93 -0.42 -0.49 16 44 H 0.07 -0.06 6.46 -51.93 -0.34 -0.39 16 LS Contribution 363.97 15.07 5.48 5.48 Total: 0.00 -9.98 363.97 -8.42 -18.40 By element: Atomic # 1 Polarization: -5.17 SS G_CDS: -6.39 Total: -11.57 kcal Atomic # 6 Polarization: 2.39 SS G_CDS: -0.81 Total: 1.58 kcal Atomic # 7 Polarization: -0.36 SS G_CDS: -0.23 Total: -0.60 kcal Atomic # 8 Polarization: -6.17 SS G_CDS: -1.01 Total: -7.19 kcal Atomic # 14 Polarization: -0.66 SS G_CDS: -5.46 Total: -6.11 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -9.98 -8.42 -18.40 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14474850_13308374.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.261 kcal (2) G-P(sol) polarization free energy of solvation -9.976 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.237 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.421 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.397 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.658 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds