Wall clock time and date at job start Tue Mar 9 2021 13:20:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34236 * 117.00279 * 2 1 4 4 O 1.20825 * 119.99051 * 359.97438 * 3 2 1 5 5 C 1.50691 * 120.00304 * 180.02562 * 3 2 1 6 6 H 1.09001 * 109.47375 * 59.99200 * 5 3 2 7 7 C 1.52999 * 109.46995 * 179.97438 * 5 3 2 8 8 C 1.53007 * 109.46945 * 179.97438 * 7 5 3 9 9 C 1.52994 * 109.47011 * 299.99842 * 8 7 5 10 10 H 1.09002 * 109.46848 * 180.02562 * 9 8 7 11 11 N 1.46498 * 109.47604 * 299.99861 * 9 8 7 12 12 C 1.34770 * 120.00818 * 205.00449 * 11 9 8 13 13 O 1.21702 * 119.99590 * 5.08473 * 12 11 9 14 14 C 1.46666 * 120.00515 * 185.08910 * 12 11 9 15 15 C 1.37891 * 126.22509 * 5.33054 * 14 12 11 16 16 C 1.39878 * 107.09219 * 180.22530 * 15 14 12 17 17 Br 1.89095 * 126.07528 * 179.75292 * 16 15 14 18 18 C 1.35509 * 107.85422 * 359.77488 * 16 15 14 19 19 C 1.50703 * 125.57272 * 180.02562 * 18 16 15 20 20 O 1.42899 * 109.46874 * 209.97218 * 19 18 16 21 21 Si 1.86301 * 109.46948 * 329.97284 * 19 18 16 22 22 N 1.35601 * 108.85451 * 359.97438 * 18 16 15 23 23 C 1.46505 * 125.67282 * 179.97438 * 22 18 16 24 24 C 1.52993 * 109.47439 * 60.00196 * 9 8 7 25 25 C 1.52999 * 109.47299 * 299.99783 * 24 9 8 26 26 H 1.09008 * 109.47115 * 180.02562 * 1 2 3 27 27 H 1.08998 * 109.47473 * 300.00148 * 1 2 3 28 28 H 1.09000 * 109.47039 * 60.00535 * 1 2 3 29 29 H 1.08995 * 109.47258 * 60.00054 * 7 5 3 30 30 H 1.08998 * 109.46999 * 299.99618 * 7 5 3 31 31 H 1.09001 * 109.47008 * 180.02562 * 8 7 5 32 32 H 1.08995 * 109.46898 * 60.00079 * 8 7 5 33 33 H 0.97004 * 119.99556 * 25.00145 * 11 9 8 34 34 H 1.07991 * 126.45210 * 359.97438 * 15 14 12 35 35 H 1.09004 * 109.47065 * 89.97152 * 19 18 16 36 36 H 0.96698 * 113.99768 * 179.97438 * 20 19 18 37 37 H 1.48500 * 110.00020 * 178.68315 * 21 19 18 38 38 H 1.48497 * 109.99722 * 300.00082 * 21 19 18 39 39 H 1.09000 * 109.47036 * 84.30586 * 23 22 18 40 40 H 1.08999 * 109.47002 * 324.30345 * 23 22 18 41 41 H 1.09000 * 109.46958 * 204.30480 * 23 22 18 42 42 H 1.09001 * 109.47422 * 60.00015 * 24 9 8 43 43 H 1.09006 * 109.47620 * 179.97438 * 24 9 8 44 44 H 1.09001 * 109.47073 * 300.00446 * 25 24 9 45 45 H 1.09001 * 109.47449 * 179.97438 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 -0.0006 6 1 3.9557 0.7808 -0.8907 7 6 4.0001 2.7421 -0.0011 8 6 5.5280 2.8222 -0.0011 9 6 6.0750 2.1291 1.2485 10 1 7.1635 2.1866 1.2487 11 7 5.5512 2.7936 2.4444 12 6 6.2323 2.7270 3.6054 13 8 7.3262 2.1947 3.6393 14 6 5.6553 3.2958 4.8279 15 6 4.3919 3.8324 4.9596 16 6 4.2624 4.2587 6.2855 17 35 2.7402 5.0830 7.0465 18 6 5.4218 3.9765 6.9277 19 6 5.7147 4.2682 8.3770 20 8 7.1143 4.5047 8.5418 21 14 4.7626 5.7778 8.9113 22 7 6.2750 3.3878 6.0535 23 6 7.6330 2.9319 6.3606 24 6 5.6412 0.6620 1.2491 25 6 4.1133 0.5818 1.2490 26 1 -0.3634 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 3.6107 3.2364 0.8889 30 1 3.6100 3.2359 -0.8911 31 1 5.8371 3.8675 -0.0010 32 1 5.9177 2.3278 -0.8908 33 1 4.7140 3.2817 2.4006 34 1 3.6448 3.9124 4.1840 35 1 5.4160 3.4155 8.9868 36 1 7.3757 4.6998 9.4521 37 1 5.0180 6.0575 10.3472 38 1 5.1608 6.9473 8.0874 39 1 7.5916 1.9323 6.7932 40 1 8.0940 3.6170 7.0721 41 1 8.2238 2.9074 5.4449 42 1 6.0310 0.1674 0.3593 43 1 6.0313 0.1680 2.1391 44 1 3.7235 1.0763 2.1388 45 1 3.8043 -0.4635 1.2490 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14474850_5000100.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:20:35 Heat of formation + Delta-G solvation = -106.382743 kcal Electronic energy + Delta-G solvation = -30580.677701 eV Core-core repulsion = 26225.726251 eV Total energy + Delta-G solvation = -4354.951449 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 401.072 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.90248 -41.84700 -40.77841 -38.93733 -37.95856 -37.49240 -35.22299 -34.47309 -32.75233 -31.86789 -31.58797 -30.86549 -28.60712 -27.39946 -26.97023 -24.80859 -23.73617 -23.43550 -21.99241 -21.60430 -20.56687 -20.15781 -19.01948 -18.65149 -18.57267 -17.79217 -17.47996 -17.36735 -16.93786 -16.66188 -16.38456 -15.91839 -15.70925 -15.21862 -15.01968 -14.82793 -14.72690 -14.67036 -14.33667 -14.23376 -14.09414 -13.86792 -13.75931 -13.65634 -13.31753 -13.24490 -13.12127 -12.90419 -12.83966 -12.73078 -12.17765 -12.05372 -12.00435 -11.81707 -11.61212 -11.58340 -11.39377 -11.18801 -11.14277 -10.82615 -10.18028 -9.89891 -9.32157 -4.69831 0.14205 0.31819 0.87183 1.14803 1.23062 1.40939 1.57792 1.76369 1.93507 2.13509 2.30175 2.88752 3.41811 3.49799 3.53249 3.64300 3.71512 3.75478 3.98626 4.06924 4.17649 4.18254 4.21075 4.28832 4.29758 4.31828 4.35683 4.40872 4.43180 4.45922 4.57858 4.66470 4.71715 4.76415 4.82259 4.97398 5.09028 5.12344 5.15810 5.22047 5.27178 5.31143 5.40318 5.49387 5.59352 5.78467 6.37924 6.42408 6.70158 7.04088 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.462 3.538 4 O -0.537 6.537 5 C -0.075 4.075 6 H 0.133 0.867 7 C -0.104 4.104 8 C -0.117 4.117 9 C 0.143 3.857 10 H 0.084 0.916 11 N -0.699 5.699 12 C 0.593 3.407 13 O -0.573 6.573 14 C -0.060 4.060 15 C -0.096 4.096 16 C -0.194 4.194 17 Br 0.091 6.909 18 C 0.095 3.905 19 C -0.041 4.041 20 O -0.555 6.555 21 Si 0.619 3.381 22 N -0.388 5.388 23 C 0.062 3.938 24 C -0.123 4.123 25 C -0.104 4.104 26 H 0.126 0.874 27 H 0.061 0.939 28 H 0.060 0.940 29 H 0.066 0.934 30 H 0.077 0.923 31 H 0.083 0.917 32 H 0.104 0.896 33 H 0.411 0.589 34 H 0.181 0.819 35 H 0.111 0.889 36 H 0.402 0.598 37 H -0.250 1.250 38 H -0.296 1.296 39 H 0.083 0.917 40 H 0.112 0.888 41 H 0.092 0.908 42 H 0.098 0.902 43 H 0.057 0.943 44 H 0.061 0.939 45 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.460 -3.211 -1.345 4.263 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.280 6.280 3 C 0.306 3.694 4 O -0.426 6.426 5 C -0.093 4.093 6 H 0.150 0.850 7 C -0.142 4.142 8 C -0.154 4.154 9 C 0.040 3.960 10 H 0.102 0.898 11 N -0.351 5.351 12 C 0.380 3.620 13 O -0.454 6.454 14 C -0.174 4.174 15 C -0.122 4.122 16 C -0.280 4.280 17 Br 0.175 6.825 18 C -0.028 4.028 19 C -0.151 4.151 20 O -0.366 6.366 21 Si 0.520 3.480 22 N -0.060 5.060 23 C -0.078 4.078 24 C -0.161 4.161 25 C -0.141 4.141 26 H 0.144 0.856 27 H 0.079 0.921 28 H 0.079 0.921 29 H 0.085 0.915 30 H 0.096 0.904 31 H 0.101 0.899 32 H 0.122 0.878 33 H 0.249 0.751 34 H 0.199 0.801 35 H 0.129 0.871 36 H 0.255 0.745 37 H -0.175 1.175 38 H -0.222 1.222 39 H 0.102 0.898 40 H 0.130 0.870 41 H 0.111 0.889 42 H 0.116 0.884 43 H 0.076 0.924 44 H 0.080 0.920 45 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -2.049 -2.471 -1.331 3.475 hybrid contribution 0.838 0.117 0.586 1.029 sum -1.211 -2.354 -0.745 2.750 Atomic orbital electron populations 1.23495 0.75229 1.05440 1.02406 1.86512 1.24585 1.33350 1.83585 1.24365 0.93008 0.80974 0.71044 1.90674 1.68075 1.37286 1.46581 1.21231 0.85056 0.99904 1.03144 0.84962 1.21449 0.95946 0.93110 1.03709 1.21816 0.94168 1.02302 0.97132 1.21137 0.99289 0.92073 0.83527 0.89777 1.45754 1.26381 1.54473 1.08468 1.16908 0.83948 0.78327 0.82768 1.90792 1.21372 1.46997 1.86281 1.20270 0.95100 1.14245 0.87738 1.21420 0.95356 0.99847 0.95590 1.20603 0.94361 1.15996 0.97000 1.96293 1.31610 1.78462 1.76162 1.20026 0.90101 1.00388 0.92315 1.24304 0.88429 1.10464 0.91948 1.86360 1.21176 1.93194 1.35905 0.92900 0.99135 0.76057 0.79868 1.43931 1.13323 1.41648 1.07089 1.22603 0.78839 1.01910 1.04421 1.21887 0.94858 0.95745 1.03642 1.21440 0.95817 1.01375 0.95489 0.85617 0.92055 0.92093 0.91491 0.90445 0.89876 0.87757 0.75109 0.80127 0.87142 0.74513 1.17496 1.22209 0.89841 0.87004 0.88933 0.88356 0.92449 0.91983 0.90047 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 10.56 113.37 1.20 1.14 16 2 O -0.36 -0.41 10.47 -51.47 -0.54 -0.95 16 3 C 0.46 0.76 7.25 71.23 0.52 1.28 16 4 O -0.54 -4.07 15.73 21.97 0.35 -3.72 16 5 C -0.07 0.36 2.63 -11.54 -0.03 0.33 16 6 H 0.13 -1.12 8.14 -2.39 -0.02 -1.14 16 7 C -0.10 0.58 4.32 30.60 0.13 0.71 16 8 C -0.12 0.90 5.61 30.59 0.17 1.07 16 9 C 0.14 -0.53 2.83 44.99 0.13 -0.40 16 10 H 0.08 -0.03 7.51 -2.39 -0.02 -0.04 16 11 N -0.70 1.17 4.21 -446.53 -1.88 -0.70 16 12 C 0.59 2.92 7.74 86.44 0.67 3.59 16 13 O -0.57 -6.26 14.24 -4.36 -0.06 -6.33 16 14 C -0.06 -0.29 6.88 40.35 0.28 -0.01 16 15 C -0.10 -0.13 10.33 22.58 0.23 0.10 16 16 C -0.19 -0.56 6.16 22.04 0.14 -0.43 16 17 Br 0.09 -0.04 28.25 -20.37 -0.58 -0.62 16 18 C 0.09 0.44 6.18 41.35 0.26 0.70 16 19 C -0.04 -0.05 2.98 71.24 0.21 0.16 16 20 O -0.56 -0.44 9.81 -148.98 -1.46 -1.91 16 21 Si 0.62 1.94 27.11 68.60 1.86 3.80 16 22 N -0.39 -2.37 3.16 -519.59 -1.64 -4.01 16 23 C 0.06 0.27 10.23 127.77 1.31 1.58 16 24 C -0.12 0.55 5.60 30.59 0.17 0.72 16 25 C -0.10 0.48 4.98 30.60 0.15 0.64 16 26 H 0.13 -0.92 8.14 -2.38 -0.02 -0.94 16 27 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 28 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 29 H 0.07 -0.31 6.46 -2.39 -0.02 -0.32 16 30 H 0.08 -0.32 8.10 -2.39 -0.02 -0.34 16 31 H 0.08 -0.62 8.14 -2.39 -0.02 -0.64 16 32 H 0.10 -1.10 8.14 -2.39 -0.02 -1.12 16 33 H 0.41 -2.08 5.81 -92.71 -0.54 -2.62 16 34 H 0.18 -0.84 7.49 -2.92 -0.02 -0.86 16 35 H 0.11 -0.36 7.96 -2.39 -0.02 -0.38 16 36 H 0.40 -2.85 8.74 -74.06 -0.65 -3.50 16 37 H -0.25 -1.33 7.11 99.48 0.71 -0.62 16 38 H -0.30 -3.49 7.11 99.48 0.71 -2.78 16 39 H 0.08 0.21 8.14 -2.39 -0.02 0.19 16 40 H 0.11 0.38 5.48 -2.39 -0.01 0.37 16 41 H 0.09 0.65 6.10 -2.39 -0.01 0.64 16 42 H 0.10 -0.75 8.14 -2.39 -0.02 -0.77 16 43 H 0.06 0.01 8.14 -2.38 -0.02 -0.01 16 44 H 0.06 -0.18 7.60 -2.39 -0.02 -0.20 16 45 H 0.08 -0.36 8.11 -2.39 -0.02 -0.38 16 Total: 0.00 -20.43 374.08 1.47 -18.96 By element: Atomic # 1 Polarization: -15.58 SS G_CDS: -0.11 Total: -15.68 kcal Atomic # 6 Polarization: 5.64 SS G_CDS: 5.53 Total: 11.16 kcal Atomic # 7 Polarization: -1.20 SS G_CDS: -3.52 Total: -4.72 kcal Atomic # 8 Polarization: -11.19 SS G_CDS: -1.72 Total: -12.91 kcal Atomic # 14 Polarization: 1.94 SS G_CDS: 1.86 Total: 3.80 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -0.58 Total: -0.62 kcal Total: -20.43 1.47 -18.96 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14474850_5000100.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.420 kcal (2) G-P(sol) polarization free energy of solvation -20.430 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.850 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.467 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.963 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.383 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds