Wall clock time and date at job start Tue Mar 9 2021 13:21:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34230 * 117.00630 * 2 1 4 4 O 1.20825 * 119.99518 * 359.97438 * 3 2 1 5 5 C 1.50695 * 120.00003 * 180.02562 * 3 2 1 6 6 H 1.08993 * 109.47585 * 59.99256 * 5 3 2 7 7 C 1.53001 * 109.46766 * 179.97438 * 5 3 2 8 8 C 1.53005 * 109.47062 * 179.97438 * 7 5 3 9 9 C 1.53002 * 109.46957 * 300.00097 * 8 7 5 10 10 H 1.08999 * 109.46922 * 179.97438 * 9 8 7 11 11 N 1.46503 * 109.46906 * 299.99472 * 9 8 7 12 12 C 1.34772 * 119.99923 * 204.99953 * 11 9 8 13 13 O 1.21702 * 120.00454 * 0.02562 * 12 11 9 14 14 C 1.46580 * 119.99858 * 180.02562 * 12 11 9 15 15 C 1.36654 * 125.45884 * 179.97438 * 14 12 11 16 16 C 1.37471 * 113.29917 * 179.80776 * 15 14 12 17 17 C 1.50698 * 122.45344 * 180.25990 * 16 15 14 18 18 C 1.33827 * 115.09929 * 0.42740 * 16 15 14 19 19 C 1.50696 * 124.52185 * 179.85543 * 18 16 15 20 20 O 1.42899 * 109.47314 * 46.32193 * 19 18 16 21 21 Si 1.86298 * 109.47330 * 166.32246 * 19 18 16 22 22 S 1.70611 * 110.95265 * 359.58246 * 18 16 15 23 23 C 1.52994 * 109.47353 * 59.99805 * 9 8 7 24 24 C 1.53000 * 109.46741 * 299.99208 * 5 3 2 25 25 H 1.08996 * 109.47296 * 179.97438 * 1 2 3 26 26 H 1.09003 * 109.46950 * 300.00569 * 1 2 3 27 27 H 1.09005 * 109.46684 * 60.00020 * 1 2 3 28 28 H 1.08997 * 109.47370 * 59.99924 * 7 5 3 29 29 H 1.09001 * 109.46908 * 299.99552 * 7 5 3 30 30 H 1.08993 * 109.47056 * 179.97438 * 8 7 5 31 31 H 1.08997 * 109.46790 * 59.99936 * 8 7 5 32 32 H 0.96999 * 119.99968 * 25.00873 * 11 9 8 33 33 H 1.07992 * 123.35238 * 0.03744 * 15 14 12 34 34 H 1.08995 * 109.47260 * 264.35265 * 17 16 15 35 35 H 1.09002 * 109.46826 * 24.35718 * 17 16 15 36 36 H 1.09001 * 109.47197 * 144.34922 * 17 16 15 37 37 H 1.08998 * 109.46910 * 286.31973 * 19 18 16 38 38 H 0.96691 * 114.00386 * 59.99687 * 20 19 18 39 39 H 1.48492 * 110.00343 * 180.02562 * 21 19 18 40 40 H 1.48507 * 109.99831 * 301.32125 * 21 19 18 41 41 H 1.09001 * 109.47539 * 60.00324 * 23 9 8 42 42 H 1.09001 * 109.46947 * 179.97438 * 23 9 8 43 43 H 1.08997 * 109.47587 * 300.00194 * 24 5 3 44 44 H 1.09000 * 109.47018 * 60.01061 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4035 2.2093 -0.0005 5 6 3.5664 1.2746 -0.0006 6 1 3.9558 0.7806 -0.8907 7 6 4.0003 2.7418 -0.0011 8 6 5.5283 2.8218 -0.0011 9 6 6.0752 2.1287 1.2485 10 1 7.1637 2.1852 1.2483 11 7 5.5514 2.7933 2.4444 12 6 6.2325 2.7265 3.6054 13 8 7.2830 2.1144 3.6603 14 6 5.7082 3.3911 4.8020 15 6 6.3038 3.3950 6.0319 16 6 5.5964 4.1003 6.9764 17 6 6.0685 4.2430 8.4004 18 6 4.4562 4.6480 6.5396 19 6 3.5170 5.4603 7.3935 20 8 4.2658 6.4114 8.1530 21 14 2.3022 6.3559 6.3013 22 16 4.2115 4.3101 4.8853 23 6 5.6413 0.6615 1.2491 24 6 4.1138 0.5809 1.2484 25 1 -0.3633 -1.0276 -0.0005 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5139 -0.8901 28 1 3.6110 3.2362 0.8889 29 1 3.6103 3.2357 -0.8911 30 1 5.8373 3.8670 -0.0019 31 1 5.9179 2.3274 -0.8908 32 1 4.7143 3.2814 2.4006 33 1 7.2391 2.8969 6.2402 34 1 5.5918 3.4827 9.0191 35 1 7.1505 4.1169 8.4388 36 1 5.8047 5.2327 8.7732 37 1 2.9773 4.7984 8.0707 38 1 4.7722 7.0342 7.6140 39 1 1.3707 7.1612 7.1313 40 1 3.0273 7.2378 5.3516 41 1 6.0310 0.1670 0.3593 42 1 6.0313 0.1677 2.1390 43 1 3.7245 1.0749 2.1386 44 1 3.8047 -0.4644 1.2483 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14474850_6739946.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:21:21 Heat of formation + Delta-G solvation = -128.781187 kcal Electronic energy + Delta-G solvation = -27888.613655 eV Core-core repulsion = 23898.860956 eV Total energy + Delta-G solvation = -3989.752699 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.122 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -41.90886 -41.02425 -40.01405 -38.94112 -37.53535 -37.36797 -34.91827 -32.52319 -32.03279 -31.21942 -30.17428 -28.67990 -26.60527 -24.98567 -24.33096 -23.86562 -22.16249 -21.70948 -20.42086 -20.14980 -19.47662 -18.59865 -17.86083 -17.79157 -17.46468 -17.26835 -16.72918 -16.62945 -16.38323 -15.95876 -15.65219 -15.27558 -15.01305 -14.93564 -14.58674 -14.47756 -14.26308 -13.94093 -13.88144 -13.78749 -13.57610 -13.40823 -13.24076 -13.14863 -12.99588 -12.88836 -12.39357 -12.37382 -12.34044 -12.10156 -11.81258 -11.77165 -11.70064 -11.50068 -11.17590 -11.06215 -10.81603 -10.17824 -9.76265 -9.42164 -5.21506 -0.61499 0.28696 0.68033 1.05866 1.18607 1.32362 1.45929 1.68937 1.79403 2.04836 2.20423 3.12193 3.38355 3.46841 3.52532 3.56482 3.72444 3.87486 3.92334 4.06655 4.13570 4.15822 4.19870 4.23128 4.27248 4.28614 4.32250 4.40137 4.49010 4.56806 4.58204 4.65108 4.79462 4.82167 4.88925 4.91721 4.94071 5.02503 5.04294 5.10834 5.16268 5.38224 5.39136 5.43357 5.45208 6.17539 6.37098 6.72940 7.12174 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.463 3.537 4 O -0.505 6.505 5 C -0.080 4.080 6 H 0.113 0.887 7 C -0.107 4.107 8 C -0.128 4.128 9 C 0.144 3.856 10 H 0.097 0.903 11 N -0.722 5.722 12 C 0.593 3.407 13 O -0.524 6.524 14 C -0.260 4.260 15 C -0.049 4.049 16 C -0.087 4.087 17 C -0.108 4.108 18 C -0.238 4.238 19 C -0.030 4.030 20 O -0.517 6.517 21 Si 0.650 3.350 22 S 0.194 5.806 23 C -0.130 4.130 24 C -0.111 4.111 25 H 0.103 0.897 26 H 0.064 0.936 27 H 0.063 0.937 28 H 0.070 0.930 29 H 0.081 0.919 30 H 0.079 0.921 31 H 0.087 0.913 32 H 0.397 0.603 33 H 0.155 0.845 34 H 0.070 0.930 35 H 0.065 0.935 36 H 0.091 0.909 37 H 0.129 0.871 38 H 0.379 0.621 39 H -0.233 1.233 40 H -0.241 1.241 41 H 0.081 0.919 42 H 0.078 0.922 43 H 0.068 0.932 44 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.492 -1.066 -2.075 3.414 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.306 3.694 4 O -0.392 6.392 5 C -0.099 4.099 6 H 0.131 0.869 7 C -0.145 4.145 8 C -0.166 4.166 9 C 0.040 3.960 10 H 0.115 0.885 11 N -0.374 5.374 12 C 0.379 3.621 13 O -0.402 6.402 14 C -0.380 4.380 15 C -0.082 4.082 16 C -0.101 4.101 17 C -0.166 4.166 18 C -0.357 4.357 19 C -0.142 4.142 20 O -0.324 6.324 21 Si 0.548 3.452 22 S 0.463 5.537 23 C -0.169 4.169 24 C -0.148 4.148 25 H 0.121 0.879 26 H 0.083 0.917 27 H 0.082 0.918 28 H 0.088 0.912 29 H 0.099 0.901 30 H 0.098 0.902 31 H 0.106 0.894 32 H 0.233 0.767 33 H 0.172 0.828 34 H 0.089 0.911 35 H 0.084 0.916 36 H 0.109 0.891 37 H 0.146 0.854 38 H 0.227 0.773 39 H -0.156 1.156 40 H -0.164 1.164 41 H 0.099 0.901 42 H 0.096 0.904 43 H 0.087 0.913 44 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -3.712 -0.370 -2.899 4.724 hybrid contribution 1.311 0.441 1.253 1.866 sum -2.400 0.071 -1.646 2.911 Atomic orbital electron populations 1.23316 0.75967 1.03977 1.02701 1.86509 1.23691 1.33364 1.83852 1.23811 0.92028 0.81429 0.72153 1.90685 1.67194 1.36341 1.44980 1.21159 0.86985 0.99373 1.02430 0.86877 1.21475 0.95529 0.93533 1.03975 1.21877 0.94993 1.02097 0.97611 1.21053 0.99858 0.91737 0.83397 0.88490 1.46019 1.26225 1.55508 1.09697 1.16939 0.83806 0.79525 0.81792 1.90856 1.22386 1.42457 1.84488 1.24658 1.02299 1.11997 0.99004 1.20739 1.00442 0.97024 0.90033 1.18720 0.94454 0.98530 0.98353 1.20753 1.01059 1.04369 0.90432 1.24330 1.02827 1.08891 0.99683 1.24385 0.96947 0.93493 0.99352 1.86585 1.64258 1.45930 1.35639 0.95392 0.81464 0.87103 0.81211 1.82785 1.20059 1.46799 1.04098 1.21942 0.94896 0.96172 1.03843 1.21509 0.96119 1.01439 0.95767 0.87902 0.91714 0.91784 0.91172 0.90059 0.90192 0.89427 0.76682 0.82767 0.91147 0.91631 0.89089 0.85388 0.77277 1.15569 1.16448 0.90073 0.90353 0.91347 0.90047 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.24 10.47 -39.26 -0.41 -0.65 16 3 C 0.46 0.42 7.25 36.00 0.26 0.68 16 4 O -0.50 -1.77 15.73 -18.75 -0.29 -2.06 16 5 C -0.08 0.14 2.63 -91.77 -0.24 -0.10 16 6 H 0.11 -0.36 8.14 -51.93 -0.42 -0.79 16 7 C -0.11 0.23 4.32 -26.73 -0.12 0.12 16 8 C -0.13 0.39 5.61 -26.73 -0.15 0.24 16 9 C 0.14 -0.19 2.78 -67.93 -0.19 -0.38 16 10 H 0.10 0.00 7.58 -51.93 -0.39 -0.39 16 11 N -0.72 0.28 4.23 -55.15 -0.23 0.04 16 12 C 0.59 1.42 7.75 -12.90 -0.10 1.32 16 13 O -0.52 -3.00 16.50 5.19 0.09 -2.91 16 14 C -0.26 -0.38 6.45 -36.79 -0.24 -0.62 16 15 C -0.05 -0.08 9.78 -40.43 -0.40 -0.48 16 16 C -0.09 -0.06 5.75 -106.45 -0.61 -0.68 16 17 C -0.11 0.01 9.74 36.00 0.35 0.36 16 18 C -0.24 0.04 5.62 -35.86 -0.20 -0.16 16 19 C -0.03 0.03 2.68 36.00 0.10 0.13 16 20 O -0.52 0.18 10.27 -35.23 -0.36 -0.18 16 21 Si 0.65 -0.91 30.96 -169.99 -5.26 -6.17 16 22 S 0.19 -0.15 19.33 -107.50 -2.08 -2.23 16 23 C -0.13 0.21 5.60 -26.76 -0.15 0.06 16 24 C -0.11 0.20 4.98 -26.75 -0.13 0.07 16 25 H 0.10 -0.34 8.14 -51.93 -0.42 -0.77 16 26 H 0.06 -0.07 8.13 -51.93 -0.42 -0.50 16 27 H 0.06 -0.07 8.13 -51.93 -0.42 -0.49 16 28 H 0.07 -0.12 6.46 -51.93 -0.34 -0.46 16 29 H 0.08 -0.14 8.10 -51.93 -0.42 -0.56 16 30 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 31 H 0.09 -0.36 8.14 -51.93 -0.42 -0.78 16 32 H 0.40 -0.68 5.98 -40.82 -0.24 -0.93 16 33 H 0.15 0.24 8.06 -52.49 -0.42 -0.18 16 34 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 35 H 0.06 -0.04 8.10 -51.93 -0.42 -0.46 16 36 H 0.09 0.00 5.55 -51.93 -0.29 -0.28 16 37 H 0.13 -0.23 7.96 -51.93 -0.41 -0.65 16 38 H 0.38 -1.07 8.70 45.56 0.40 -0.67 16 39 H -0.23 -0.30 7.11 56.52 0.40 0.10 16 40 H -0.24 -0.11 7.11 56.52 0.40 0.29 16 41 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 42 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 43 H 0.07 -0.07 7.60 -51.93 -0.39 -0.47 16 44 H 0.08 -0.14 8.11 -51.93 -0.42 -0.56 16 LS Contribution 368.66 15.07 5.56 5.56 Total: 0.00 -7.60 368.66 -10.11 -17.71 By element: Atomic # 1 Polarization: -4.35 SS G_CDS: -6.36 Total: -10.71 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: -0.75 Total: 1.60 kcal Atomic # 7 Polarization: 0.28 SS G_CDS: -0.23 Total: 0.04 kcal Atomic # 8 Polarization: -4.82 SS G_CDS: -0.98 Total: -5.80 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.26 Total: -6.17 kcal Atomic # 16 Polarization: -0.15 SS G_CDS: -2.08 Total: -2.23 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -7.60 -10.11 -17.71 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14474850_6739946.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.073 kcal (2) G-P(sol) polarization free energy of solvation -7.598 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.671 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.110 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.708 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.781 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds