Wall clock time and date at job start Tue Mar 9 2021 13:21:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34228 * 117.00171 * 2 1 4 4 O 1.20830 * 119.99496 * 359.97438 * 3 2 1 5 5 C 1.50696 * 120.00409 * 180.02562 * 3 2 1 6 6 H 1.09000 * 109.46647 * 299.99509 * 5 3 2 7 7 C 1.53002 * 109.47306 * 59.99165 * 5 3 2 8 8 C 1.52996 * 109.46972 * 180.02562 * 7 5 3 9 9 C 1.52997 * 109.47165 * 300.00293 * 8 7 5 10 10 H 1.09002 * 109.47045 * 180.02562 * 9 8 7 11 11 N 1.46504 * 109.47417 * 299.99920 * 9 8 7 12 12 C 1.34772 * 120.00132 * 275.00688 * 11 9 8 13 13 O 1.21287 * 120.00114 * 359.97438 * 12 11 9 14 14 C 1.50703 * 120.00073 * 179.97438 * 12 11 9 15 15 N 1.46502 * 109.47076 * 179.97438 * 14 12 11 16 16 C 1.36830 * 125.06476 * 265.02364 * 15 14 12 17 17 C 1.34234 * 109.94082 * 179.97438 * 16 15 14 18 18 C 1.50697 * 126.50263 * 179.97438 * 17 16 15 19 19 O 1.42901 * 109.46989 * 255.02639 * 18 17 16 20 20 Si 1.86301 * 109.47167 * 15.02640 * 18 17 16 21 21 C 1.46492 * 106.99701 * 0.02562 * 17 16 15 22 22 C 1.39591 * 134.03747 * 180.02562 * 21 17 16 23 23 C 1.36659 * 119.76502 * 179.97438 * 22 21 17 24 24 C 1.38795 * 120.52814 * 0.02562 * 23 22 21 25 25 C 1.37783 * 120.66393 * 359.97438 * 24 23 22 26 26 C 1.37694 * 125.06124 * 84.72110 * 15 14 12 27 27 C 1.52999 * 109.47592 * 60.00300 * 9 8 7 28 28 C 1.52997 * 109.47238 * 179.97438 * 5 3 2 29 29 H 1.09005 * 109.47571 * 300.00511 * 1 2 3 30 30 H 1.08999 * 109.47130 * 60.00419 * 1 2 3 31 31 H 1.09000 * 109.47075 * 180.02562 * 1 2 3 32 32 H 1.08992 * 109.46974 * 300.00616 * 7 5 3 33 33 H 1.08996 * 109.46550 * 60.00722 * 7 5 3 34 34 H 1.09000 * 109.47054 * 60.00300 * 8 7 5 35 35 H 1.09001 * 109.46997 * 180.02562 * 8 7 5 36 36 H 0.96997 * 119.99717 * 95.00046 * 11 9 8 37 37 H 1.08993 * 109.46840 * 299.99266 * 14 12 11 38 38 H 1.09002 * 109.46880 * 59.99705 * 14 12 11 39 39 H 1.08008 * 125.03085 * 359.96727 * 16 15 14 40 40 H 1.08999 * 109.47393 * 135.02950 * 18 17 16 41 41 H 0.96705 * 113.99514 * 180.02562 * 19 18 17 42 42 H 1.48500 * 110.00050 * 299.99895 * 20 18 17 43 43 H 1.48501 * 109.99993 * 61.31980 * 20 18 17 44 44 H 1.07999 * 120.11740 * 359.96024 * 22 21 17 45 45 H 1.08001 * 119.73718 * 180.02562 * 23 22 21 46 46 H 1.08000 * 119.66717 * 179.97438 * 24 23 22 47 47 H 1.08002 * 120.11172 * 180.02562 * 25 24 23 48 48 H 1.08993 * 109.47839 * 180.02562 * 27 9 8 49 49 H 1.09000 * 109.47160 * 59.99666 * 27 9 8 50 50 H 1.09001 * 109.46922 * 59.99800 * 28 5 3 51 51 H 1.09000 * 109.47140 * 299.99500 * 28 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 -0.0006 6 1 3.9563 0.7807 0.8892 7 6 4.1129 0.5814 -1.2501 8 6 5.6408 0.6610 -1.2503 9 6 6.0751 2.1281 -1.2499 10 1 7.1636 2.1848 -1.2505 11 7 5.5513 2.7928 -2.4459 12 6 6.2323 2.7256 -3.6069 13 8 7.2790 2.1153 -3.6617 14 6 5.6933 3.4088 -4.8373 15 7 6.6100 3.1897 -5.9588 16 6 7.5988 4.0526 -6.3460 17 6 8.2547 3.5519 -7.4047 18 6 9.4089 4.1944 -8.1301 19 8 8.9528 4.7234 -9.3768 20 14 10.1070 5.5726 -7.0889 21 6 7.6350 2.2631 -7.7221 22 6 7.8673 1.2876 -8.6932 23 6 7.0915 0.1630 -8.7243 24 6 6.0736 -0.0172 -7.7981 25 6 5.8271 0.9328 -6.8311 26 6 6.6088 2.0819 -6.7766 27 6 5.5285 2.8216 -0.0004 28 6 4.0001 2.7421 -0.0011 29 1 -0.3634 0.5139 0.8899 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 3.8039 -0.4638 -1.2501 33 1 3.7229 1.0757 -2.1398 34 1 6.0305 0.1666 -0.3605 35 1 6.0302 0.1674 -2.1407 36 1 4.7144 3.2811 -2.4020 37 1 4.7143 2.9969 -5.0821 38 1 5.6005 4.4782 -4.6478 39 1 7.8190 4.9969 -5.8702 40 1 10.1831 3.4493 -8.3131 41 1 9.6447 5.1525 -9.8986 42 1 9.0611 6.5951 -6.8324 43 1 10.6138 5.0306 -5.8025 44 1 8.6571 1.4213 -9.4175 45 1 7.2719 -0.5916 -9.4756 46 1 5.4687 -0.9111 -7.8357 47 1 5.0330 0.7833 -6.1146 48 1 5.8375 3.8668 -0.0004 49 1 5.9182 2.3271 0.8894 50 1 3.6106 3.2364 0.8889 51 1 3.6101 3.2360 -0.8911 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14474850_9818708.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:21:51 Heat of formation + Delta-G solvation = -83.453231 kcal Electronic energy + Delta-G solvation = -34600.726552 eV Core-core repulsion = 30046.371364 eV Total energy + Delta-G solvation = -4554.355189 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.177 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.66625 -41.95279 -41.02011 -39.16983 -38.10134 -37.63701 -37.52462 -35.05165 -34.27199 -32.06622 -31.91746 -31.15489 -30.37247 -29.05005 -28.49456 -25.86636 -24.87299 -23.89206 -23.78893 -22.98588 -22.03486 -21.76391 -20.63665 -20.30720 -18.85147 -18.67311 -18.29842 -18.21143 -17.86309 -17.81048 -17.50408 -16.75390 -16.55637 -16.50071 -16.05744 -15.65876 -15.53917 -15.13937 -15.04195 -14.96354 -14.89362 -14.76567 -14.53355 -14.31566 -14.19938 -13.97284 -13.80900 -13.64173 -13.38039 -13.32556 -13.24061 -12.97298 -12.78024 -12.64916 -12.48679 -12.27506 -12.13486 -12.07432 -11.89462 -11.82396 -11.69025 -11.48391 -11.26483 -11.21690 -10.64672 -10.22764 -10.18738 -9.26558 -8.74371 -4.98497 0.03946 0.56852 1.06154 1.30001 1.31869 1.35114 1.48969 1.68291 1.68608 1.97024 2.12196 2.88308 3.40625 3.44033 3.46191 3.53030 3.59652 3.62856 3.65549 3.77817 3.89940 3.94883 3.97969 3.99771 4.08597 4.17603 4.21295 4.22822 4.25083 4.27113 4.33676 4.34726 4.35996 4.51127 4.56036 4.60655 4.65247 4.70305 4.72679 4.82557 4.88755 4.98946 5.02921 5.06373 5.06859 5.17927 5.22237 5.32311 5.40940 5.43697 5.57938 5.64840 5.65542 6.03423 6.14633 6.34937 6.61845 6.99237 7.02152 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.462 3.538 4 O -0.537 6.537 5 C -0.075 4.075 6 H 0.130 0.870 7 C -0.100 4.100 8 C -0.123 4.123 9 C 0.143 3.857 10 H 0.074 0.926 11 N -0.707 5.707 12 C 0.494 3.506 13 O -0.566 6.566 14 C 0.083 3.917 15 N -0.466 5.466 16 C 0.052 3.948 17 C -0.179 4.179 18 C -0.046 4.046 19 O -0.565 6.565 20 Si 0.786 3.214 21 C -0.119 4.119 22 C -0.081 4.081 23 C -0.151 4.151 24 C -0.101 4.101 25 C -0.136 4.136 26 C 0.091 3.909 27 C -0.115 4.115 28 C -0.102 4.102 29 H 0.061 0.939 30 H 0.061 0.939 31 H 0.126 0.874 32 H 0.079 0.921 33 H 0.064 0.936 34 H 0.092 0.908 35 H 0.052 0.948 36 H 0.414 0.586 37 H 0.143 0.857 38 H 0.152 0.848 39 H 0.174 0.826 40 H 0.075 0.925 41 H 0.399 0.601 42 H -0.282 1.282 43 H -0.300 1.300 44 H 0.129 0.871 45 H 0.144 0.856 46 H 0.150 0.850 47 H 0.132 0.868 48 H 0.084 0.916 49 H 0.099 0.901 50 H 0.077 0.923 51 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.962 0.862 2.278 2.618 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.280 6.280 3 C 0.307 3.693 4 O -0.427 6.427 5 C -0.094 4.094 6 H 0.148 0.852 7 C -0.138 4.138 8 C -0.161 4.161 9 C 0.039 3.961 10 H 0.092 0.908 11 N -0.361 5.361 12 C 0.279 3.721 13 O -0.444 6.444 14 C -0.041 4.041 15 N -0.149 5.149 16 C -0.073 4.073 17 C -0.186 4.186 18 C -0.156 4.156 19 O -0.375 6.375 20 Si 0.691 3.309 21 C -0.124 4.124 22 C -0.100 4.100 23 C -0.170 4.170 24 C -0.120 4.120 25 C -0.157 4.157 26 C -0.014 4.014 27 C -0.153 4.153 28 C -0.140 4.140 29 H 0.079 0.921 30 H 0.079 0.921 31 H 0.145 0.855 32 H 0.098 0.902 33 H 0.082 0.918 34 H 0.111 0.889 35 H 0.071 0.929 36 H 0.252 0.748 37 H 0.161 0.839 38 H 0.169 0.831 39 H 0.191 0.809 40 H 0.093 0.907 41 H 0.250 0.750 42 H -0.209 1.209 43 H -0.228 1.228 44 H 0.147 0.853 45 H 0.162 0.838 46 H 0.168 0.832 47 H 0.149 0.851 48 H 0.103 0.897 49 H 0.117 0.883 50 H 0.095 0.905 51 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -1.285 0.988 3.466 3.826 hybrid contribution -0.998 -0.298 0.151 1.052 sum -2.283 0.690 3.617 4.332 Atomic orbital electron populations 1.23506 0.75134 1.05512 1.02417 1.86514 1.24664 1.33323 1.83537 1.24338 0.92956 0.80984 0.71039 1.90674 1.68079 1.37277 1.46631 1.21231 0.85108 1.00026 1.03067 0.85206 1.21408 0.95498 1.01355 0.95555 1.21855 0.95037 0.96020 1.03221 1.21032 0.98716 0.92106 0.84267 0.90822 1.46024 1.26478 1.54699 1.08875 1.21240 0.84503 0.80635 0.85709 1.90792 1.24705 1.43733 1.85212 1.21979 0.94044 1.05328 0.82794 1.43373 1.29295 1.16177 1.26058 1.21711 0.91151 0.96225 0.98257 1.20042 1.02123 0.96176 1.00295 1.24229 0.95320 1.04603 0.91432 1.86484 1.40964 1.78213 1.31803 0.94272 0.82601 0.76324 0.77744 1.19349 0.98310 0.96204 0.98493 1.20503 0.99769 0.92801 0.96928 1.20981 0.96888 0.98244 1.00846 1.21188 0.97925 0.98881 0.94017 1.20242 1.01093 0.92489 1.01837 1.18478 0.99196 0.90441 0.93312 1.21806 0.94242 1.02253 0.96990 1.21442 0.95755 0.92972 1.03810 0.92050 0.92056 0.85548 0.90183 0.91756 0.88921 0.92889 0.74830 0.83936 0.83063 0.80899 0.90698 0.75043 1.20858 1.22802 0.85347 0.83785 0.83230 0.85060 0.89703 0.88262 0.90481 0.91180 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 10.56 113.37 1.20 1.13 16 2 O -0.36 -0.39 10.47 -51.40 -0.54 -0.92 16 3 C 0.46 0.66 7.26 71.23 0.52 1.18 16 4 O -0.54 -3.89 15.73 21.95 0.35 -3.54 16 5 C -0.08 0.37 2.63 -11.54 -0.03 0.34 16 6 H 0.13 -1.03 8.14 -2.39 -0.02 -1.05 16 7 C -0.10 0.48 4.98 30.59 0.15 0.63 16 8 C -0.12 0.43 5.60 30.59 0.17 0.60 16 9 C 0.14 -0.51 2.78 44.99 0.13 -0.39 16 10 H 0.07 0.09 7.58 -2.39 -0.02 0.08 16 11 N -0.71 2.94 4.23 -442.53 -1.87 1.07 16 12 C 0.49 1.13 7.86 87.66 0.69 1.82 16 13 O -0.57 -7.40 16.08 -3.05 -0.05 -7.45 16 14 C 0.08 -0.13 6.48 85.63 0.56 0.42 16 15 N -0.47 -3.53 2.27 -519.99 -1.18 -4.71 16 16 C 0.05 0.48 9.89 83.00 0.82 1.30 16 17 C -0.18 -2.03 5.61 -18.63 -0.10 -2.13 16 18 C -0.05 -0.23 3.05 71.23 0.22 -0.01 16 19 O -0.57 -2.38 12.86 -148.98 -1.92 -4.30 16 20 Si 0.79 0.51 30.79 68.60 2.11 2.62 16 21 C -0.12 -1.58 6.35 -20.20 -0.13 -1.71 16 22 C -0.08 -0.84 10.05 22.23 0.22 -0.61 16 23 C -0.15 -1.02 9.97 22.03 0.22 -0.80 16 24 C -0.10 -0.58 10.01 22.30 0.22 -0.35 16 25 C -0.14 -1.02 10.00 22.37 0.22 -0.80 16 26 C 0.09 1.01 6.79 39.03 0.27 1.28 16 27 C -0.12 0.91 5.61 30.61 0.17 1.08 16 28 C -0.10 0.63 4.32 30.61 0.13 0.76 16 29 H 0.06 -0.10 8.13 -2.38 -0.02 -0.12 16 30 H 0.06 -0.11 8.13 -2.39 -0.02 -0.13 16 31 H 0.13 -0.94 8.14 -2.39 -0.02 -0.95 16 32 H 0.08 -0.33 8.11 -2.39 -0.02 -0.35 16 33 H 0.06 -0.26 7.61 -2.39 -0.02 -0.28 16 34 H 0.09 -0.54 8.14 -2.39 -0.02 -0.56 16 35 H 0.05 0.11 8.14 -2.39 -0.02 0.09 16 36 H 0.41 -3.78 6.86 -92.71 -0.64 -4.42 16 37 H 0.14 -0.96 8.14 -2.39 -0.02 -0.98 16 38 H 0.15 -1.24 8.12 -2.39 -0.02 -1.26 16 39 H 0.17 0.89 6.30 -2.91 -0.02 0.87 16 40 H 0.08 0.22 7.96 -2.39 -0.02 0.20 16 41 H 0.40 -2.81 8.74 -74.05 -0.65 -3.46 16 42 H -0.28 -1.40 7.04 99.48 0.70 -0.70 16 43 H -0.30 -2.37 7.11 99.48 0.71 -1.67 16 44 H 0.13 0.96 8.06 -2.91 -0.02 0.93 16 45 H 0.14 0.23 8.06 -2.91 -0.02 0.20 16 46 H 0.15 -0.01 8.06 -2.91 -0.02 -0.04 16 47 H 0.13 0.37 8.06 -2.91 -0.02 0.35 16 48 H 0.08 -0.70 8.14 -2.39 -0.02 -0.72 16 49 H 0.10 -0.97 8.14 -2.39 -0.02 -0.99 16 50 H 0.08 -0.35 8.10 -2.39 -0.02 -0.37 16 51 H 0.07 -0.42 6.46 -2.39 -0.02 -0.43 16 Total: 0.00 -31.51 417.72 2.25 -29.26 By element: Atomic # 1 Polarization: -15.47 SS G_CDS: -0.29 Total: -15.76 kcal Atomic # 6 Polarization: -1.91 SS G_CDS: 5.64 Total: 3.74 kcal Atomic # 7 Polarization: -0.59 SS G_CDS: -3.05 Total: -3.64 kcal Atomic # 8 Polarization: -14.06 SS G_CDS: -2.16 Total: -16.21 kcal Atomic # 14 Polarization: 0.51 SS G_CDS: 2.11 Total: 2.62 kcal Total: -31.51 2.25 -29.26 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14474850_9818708.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.190 kcal (2) G-P(sol) polarization free energy of solvation -31.513 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.704 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.250 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.263 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.453 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds