Wall clock time and date at job start Tue Mar 9 2021 13:22:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34224 * 116.99900 * 2 1 4 4 O 1.20827 * 120.00417 * 0.02562 * 3 2 1 5 5 C 1.50705 * 120.00156 * 179.97438 * 3 2 1 6 6 C 1.52999 * 109.47485 * 180.02562 * 5 3 2 7 7 C 1.52999 * 109.47160 * 180.02562 * 6 5 3 8 8 H 1.09007 * 112.84387 * 316.18985 * 7 6 5 9 9 C 1.53771 * 113.69414 * 87.46069 * 7 6 5 10 10 C 1.53784 * 87.08101 * 139.99224 * 9 7 6 11 11 H 1.08995 * 113.69112 * 89.12699 * 10 9 7 12 12 N 1.46509 * 113.61307 * 220.02068 * 10 9 7 13 13 C 1.34769 * 120.00070 * 252.49621 * 12 10 9 14 14 O 1.21289 * 119.99788 * 359.97438 * 13 12 10 15 15 C 1.50700 * 120.00165 * 180.02562 * 13 12 10 16 16 C 1.53000 * 109.46817 * 299.99741 * 15 13 12 17 17 O 1.42902 * 109.47050 * 179.97438 * 15 13 12 18 18 C 1.35900 * 117.00035 * 204.83995 * 17 15 13 19 19 C 1.38728 * 120.05273 * 354.62294 * 18 17 15 20 20 C 1.38151 * 119.94126 * 180.25613 * 19 18 17 21 21 C 1.38262 * 120.05348 * 359.42338 * 20 19 18 22 22 C 1.50706 * 119.94359 * 180.27587 * 21 20 19 23 23 O 1.42900 * 109.46749 * 120.32178 * 22 21 20 24 24 Si 1.86295 * 109.46910 * 0.32603 * 22 21 20 25 25 C 1.38262 * 120.11442 * 0.60153 * 21 20 19 26 26 C 1.38154 * 120.05450 * 359.68050 * 25 21 20 27 27 C 1.53776 * 113.61281 * 185.00284 * 7 6 5 28 28 H 1.09003 * 109.46888 * 180.02562 * 1 2 3 29 29 H 1.09000 * 109.47226 * 299.99874 * 1 2 3 30 30 H 1.09004 * 109.46624 * 60.00058 * 1 2 3 31 31 H 1.08996 * 109.46916 * 60.00065 * 5 3 2 32 32 H 1.08999 * 109.47164 * 300.00279 * 5 3 2 33 33 H 1.08996 * 109.47180 * 59.99994 * 6 5 3 34 34 H 1.09007 * 109.46720 * 300.00033 * 6 5 3 35 35 H 1.09003 * 113.61539 * 25.44560 * 9 7 6 36 36 H 1.08994 * 113.61826 * 254.54134 * 9 7 6 37 37 H 0.97001 * 119.99747 * 72.50282 * 12 10 9 38 38 H 1.08999 * 109.47151 * 59.99911 * 15 13 12 39 39 H 1.08999 * 109.47398 * 300.00018 * 16 15 13 40 40 H 1.09003 * 109.46777 * 60.00316 * 16 15 13 41 41 H 1.09004 * 109.46703 * 179.97438 * 16 15 13 42 42 H 1.07995 * 120.03284 * 359.97438 * 19 18 17 43 43 H 1.07995 * 119.96928 * 179.72587 * 20 19 18 44 44 H 1.08996 * 109.47276 * 240.32338 * 22 21 20 45 45 H 0.96700 * 114.00535 * 300.00103 * 23 22 21 46 46 H 1.48503 * 110.00120 * 180.02562 * 24 22 21 47 47 H 1.48502 * 109.99912 * 301.31293 * 24 22 21 48 48 H 1.07998 * 119.97513 * 179.69647 * 25 21 20 49 49 H 1.07996 * 120.02876 * 180.02562 * 26 25 21 50 50 H 1.09001 * 113.62050 * 105.38175 * 27 7 6 51 51 H 1.09006 * 113.68936 * 334.48450 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2749 0.0006 6 6 4.0002 2.7421 0.0011 7 6 5.5281 2.8221 0.0011 8 1 5.9887 2.1201 0.6962 9 6 6.1484 2.7927 -1.4057 10 6 7.1398 3.8564 -0.9052 11 1 8.0416 3.4385 -0.4578 12 7 7.4257 4.9021 -1.8907 13 6 8.6216 4.9346 -2.5112 14 8 9.4614 4.0984 -2.2534 15 6 8.9158 6.0106 -3.5244 16 6 7.9068 5.9209 -4.6711 17 8 10.2377 5.8332 -4.0375 18 6 10.8600 6.9347 -4.5337 19 6 10.1734 8.1363 -4.6300 20 6 10.8066 9.2534 -5.1398 21 6 12.1270 9.1774 -5.5427 22 6 12.8172 10.3990 -6.0926 23 8 13.9495 10.7129 -5.2793 24 14 11.6321 11.8364 -6.0885 25 6 12.8133 7.9808 -5.4482 26 6 12.1829 6.8594 -4.9445 27 6 6.0698 4.2561 0.1244 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 3.9564 0.7806 -0.8891 32 1 3.9558 0.7809 0.8908 33 1 3.6102 3.2360 0.8910 34 1 3.6108 3.2364 -0.8890 35 1 5.4782 3.1533 -2.1861 36 1 6.6180 1.8415 -1.6560 37 1 6.7541 5.5712 -2.0965 38 1 8.8393 6.9884 -3.0487 39 1 7.9833 4.9432 -5.1467 40 1 6.8987 6.0566 -4.2793 41 1 8.1194 6.6995 -5.4037 42 1 9.1434 8.1974 -4.3110 43 1 10.2712 10.1879 -5.2190 44 1 13.1461 10.2021 -7.1129 45 1 13.7310 10.9000 -4.3561 46 1 12.3004 13.0473 -6.6291 47 1 10.4353 11.5103 -6.9050 48 1 13.8432 7.9228 -5.7681 49 1 12.7195 5.9252 -4.8705 50 1 6.4760 4.4862 1.1094 51 1 5.3790 5.0178 -0.2371 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475074_10157680.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:22:07 Heat of formation + Delta-G solvation = -140.727852 kcal Electronic energy + Delta-G solvation = -31544.859180 eV Core-core repulsion = 26991.216377 eV Total energy + Delta-G solvation = -4553.642803 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.85671 -41.49288 -40.96410 -39.81258 -38.82278 -37.55865 -37.13923 -35.34308 -33.91905 -32.83286 -31.85037 -31.48505 -29.15694 -27.18208 -26.83126 -26.63604 -25.50850 -24.24691 -23.21650 -22.29941 -21.60947 -21.45968 -20.71028 -19.55500 -18.60728 -18.54732 -18.06954 -17.67447 -17.53462 -17.29910 -16.87315 -16.76474 -16.41889 -16.31231 -16.01775 -15.73261 -15.67727 -15.33784 -15.10529 -14.71070 -14.56648 -14.44496 -14.16487 -14.09546 -13.97398 -13.77012 -13.61679 -13.53750 -13.44495 -13.37197 -13.10637 -12.93093 -12.81072 -12.44989 -12.22250 -12.09849 -12.04837 -12.03110 -11.79597 -11.75150 -11.68861 -11.41620 -11.34855 -10.78568 -10.41992 -10.14551 -10.04446 -9.19529 -5.06528 0.28789 0.29520 1.20300 1.28978 1.42980 1.50622 1.59957 1.72058 1.95606 2.46138 2.66218 3.30204 3.33702 3.40016 3.47394 3.53464 3.61463 3.64134 3.68366 3.70028 3.74189 3.81834 3.86961 3.98929 4.07431 4.14301 4.19434 4.22651 4.27915 4.34643 4.39678 4.44132 4.48634 4.51049 4.53057 4.56515 4.59562 4.65723 4.67710 4.74667 4.86168 4.89791 4.94272 4.95153 5.06140 5.16614 5.21063 5.25419 5.40106 5.44424 5.50396 5.69032 6.23398 6.38039 6.58548 6.73380 7.07688 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.508 6.508 5 C -0.114 4.114 6 C -0.096 4.096 7 C -0.108 4.108 8 H 0.099 0.901 9 C -0.150 4.150 10 C 0.123 3.877 11 H 0.118 0.882 12 N -0.716 5.716 13 C 0.520 3.480 14 O -0.512 6.512 15 C 0.065 3.935 16 C -0.178 4.178 17 O -0.284 6.284 18 C 0.136 3.864 19 C -0.208 4.208 20 C -0.076 4.076 21 C -0.158 4.158 22 C -0.063 4.063 23 O -0.541 6.541 24 Si 0.686 3.314 25 C -0.051 4.051 26 C -0.146 4.146 27 C -0.140 4.140 28 H 0.103 0.897 29 H 0.064 0.936 30 H 0.063 0.937 31 H 0.107 0.893 32 H 0.108 0.892 33 H 0.076 0.924 34 H 0.074 0.926 35 H 0.087 0.913 36 H 0.075 0.925 37 H 0.402 0.598 38 H 0.102 0.898 39 H 0.077 0.923 40 H 0.079 0.921 41 H 0.078 0.922 42 H 0.133 0.867 43 H 0.129 0.871 44 H 0.113 0.887 45 H 0.379 0.621 46 H -0.255 1.255 47 H -0.259 1.259 48 H 0.134 0.866 49 H 0.135 0.865 50 H 0.078 0.922 51 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.712 0.903 2.449 5.387 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.278 6.278 3 C 0.301 3.699 4 O -0.396 6.396 5 C -0.152 4.152 6 C -0.134 4.134 7 C -0.127 4.127 8 H 0.118 0.882 9 C -0.188 4.188 10 C 0.018 3.982 11 H 0.136 0.864 12 N -0.369 5.369 13 C 0.304 3.696 14 O -0.386 6.386 15 C 0.005 3.995 16 C -0.236 4.236 17 O -0.196 6.196 18 C 0.090 3.910 19 C -0.227 4.227 20 C -0.094 4.094 21 C -0.158 4.158 22 C -0.174 4.174 23 O -0.346 6.346 24 Si 0.589 3.411 25 C -0.069 4.069 26 C -0.165 4.165 27 C -0.178 4.178 28 H 0.121 0.879 29 H 0.082 0.918 30 H 0.082 0.918 31 H 0.125 0.875 32 H 0.126 0.874 33 H 0.095 0.905 34 H 0.093 0.907 35 H 0.106 0.894 36 H 0.094 0.906 37 H 0.237 0.763 38 H 0.119 0.881 39 H 0.096 0.904 40 H 0.098 0.902 41 H 0.097 0.903 42 H 0.151 0.849 43 H 0.146 0.854 44 H 0.130 0.870 45 H 0.226 0.774 46 H -0.180 1.180 47 H -0.184 1.184 48 H 0.152 0.848 49 H 0.153 0.847 50 H 0.097 0.903 51 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -4.349 0.890 1.594 4.717 hybrid contribution -0.606 -0.071 -0.428 0.745 sum -4.955 0.819 1.167 5.156 Atomic orbital electron populations 1.23306 0.75957 1.03968 1.02676 1.86514 1.23784 1.33543 1.83985 1.23918 0.92419 0.81344 0.72192 1.90689 1.67387 1.36361 1.45163 1.21446 0.87205 1.00319 1.06180 1.21395 0.94163 0.93790 1.04043 1.22380 0.94795 0.97582 0.97956 0.88241 1.23601 0.98282 1.00000 0.96961 1.22579 0.97958 0.88438 0.89193 0.86428 1.45870 1.15846 1.32416 1.42786 1.20118 0.82303 0.85733 0.81441 1.90776 1.45882 1.38996 1.62909 1.22214 0.83197 0.99138 0.94930 1.22367 0.98086 1.04931 0.98170 1.86230 1.27998 1.31258 1.74105 1.19084 0.92281 0.85575 0.94048 1.21204 1.01099 0.92938 1.07440 1.20785 0.93910 0.97799 0.96865 1.20246 0.94700 0.96514 1.04372 1.24972 0.94980 1.00812 0.96650 1.86500 1.31781 1.91654 1.24704 0.94811 0.78012 0.77869 0.90431 1.20855 0.99802 0.90689 0.95525 1.20546 0.92159 1.00257 1.03494 1.23407 0.97434 0.97264 0.99743 0.87892 0.91767 0.91787 0.87467 0.87420 0.90522 0.90720 0.89432 0.90598 0.76315 0.88055 0.90440 0.90207 0.90304 0.84934 0.85358 0.86997 0.77384 1.17992 1.18387 0.84782 0.84678 0.90279 0.89231 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.37 10.57 -39.24 -0.41 -0.78 16 3 C 0.46 0.47 7.96 36.01 0.29 0.76 16 4 O -0.51 -2.02 15.73 -18.75 -0.29 -2.31 16 5 C -0.11 0.28 5.80 -27.88 -0.16 0.11 16 6 C -0.10 0.24 4.35 -26.73 -0.12 0.12 16 7 C -0.11 0.37 3.65 -89.82 -0.33 0.04 16 8 H 0.10 -0.38 8.13 -51.93 -0.42 -0.81 16 9 C -0.15 0.39 7.43 -25.92 -0.19 0.20 16 10 C 0.12 -0.22 4.24 -67.11 -0.28 -0.51 16 11 H 0.12 0.02 7.46 -51.93 -0.39 -0.37 16 12 N -0.72 1.48 5.25 -53.01 -0.28 1.20 16 13 C 0.52 0.66 7.23 -10.99 -0.08 0.58 16 14 O -0.51 -3.15 16.10 -14.36 -0.23 -3.38 16 15 C 0.07 -0.04 2.64 -27.88 -0.07 -0.11 16 16 C -0.18 0.46 9.07 37.16 0.34 0.80 16 17 O -0.28 -0.81 9.33 -39.33 -0.37 -1.17 16 18 C 0.14 0.24 6.60 -39.22 -0.26 -0.02 16 19 C -0.21 0.07 8.24 -39.43 -0.32 -0.26 16 20 C -0.08 0.04 8.66 -39.60 -0.34 -0.30 16 21 C -0.16 -0.04 5.39 -104.60 -0.56 -0.61 16 22 C -0.06 0.01 2.82 36.01 0.10 0.11 16 23 O -0.54 -0.19 12.77 -35.23 -0.45 -0.64 16 24 Si 0.69 -0.80 29.78 -169.99 -5.06 -5.86 16 25 C -0.05 -0.05 9.60 -39.60 -0.38 -0.43 16 26 C -0.15 -0.26 9.99 -39.43 -0.39 -0.66 16 27 C -0.14 0.48 7.39 -25.92 -0.19 0.29 16 28 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 29 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 30 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 31 H 0.11 -0.38 8.14 -51.93 -0.42 -0.81 16 32 H 0.11 -0.41 8.14 -51.93 -0.42 -0.84 16 33 H 0.08 -0.12 8.10 -51.93 -0.42 -0.54 16 34 H 0.07 -0.13 7.81 -51.92 -0.41 -0.53 16 35 H 0.09 -0.25 7.90 -51.93 -0.41 -0.66 16 36 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 37 H 0.40 -2.01 8.14 -40.82 -0.33 -2.34 16 38 H 0.10 -0.30 6.32 -51.93 -0.33 -0.63 16 39 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 40 H 0.08 -0.41 7.56 -51.93 -0.39 -0.80 16 41 H 0.08 -0.22 6.90 -51.93 -0.36 -0.57 16 42 H 0.13 -0.37 5.43 -52.49 -0.28 -0.66 16 43 H 0.13 -0.33 4.87 -52.49 -0.26 -0.59 16 44 H 0.11 0.03 7.96 -51.93 -0.41 -0.38 16 45 H 0.38 -1.30 8.70 45.56 0.40 -0.91 16 46 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 47 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 48 H 0.13 0.04 8.06 -52.49 -0.42 -0.39 16 49 H 0.14 0.19 8.06 -52.49 -0.42 -0.23 16 50 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 51 H 0.09 -0.37 8.08 -51.93 -0.42 -0.79 16 LS Contribution 419.95 15.07 6.33 6.33 Total: 0.00 -11.21 419.95 -10.53 -21.74 By element: Atomic # 1 Polarization: -8.42 SS G_CDS: -7.86 Total: -16.28 kcal Atomic # 6 Polarization: 3.07 SS G_CDS: -1.90 Total: 1.17 kcal Atomic # 7 Polarization: 1.48 SS G_CDS: -0.28 Total: 1.20 kcal Atomic # 8 Polarization: -6.54 SS G_CDS: -1.76 Total: -8.29 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: -5.06 Total: -5.86 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -11.21 -10.53 -21.74 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_10157680.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.990 kcal (2) G-P(sol) polarization free energy of solvation -11.208 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.198 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.530 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.738 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.728 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds