Wall clock time and date at job start Tue Mar 9 2021 13:23:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45192 * 1 3 3 C 1.34230 * 117.00018 * 2 1 4 4 O 1.20826 * 120.00015 * 359.97438 * 3 2 1 5 5 C 1.50701 * 120.00046 * 180.02562 * 3 2 1 6 6 C 1.52997 * 109.47212 * 179.97438 * 5 3 2 7 7 C 1.52992 * 109.47482 * 179.97438 * 6 5 3 8 8 H 1.09002 * 112.85191 * 314.67044 * 7 6 5 9 9 C 1.53783 * 113.61248 * 85.86354 * 7 6 5 10 10 C 1.53954 * 87.02151 * 139.95692 * 9 7 6 11 11 H 1.09002 * 113.54449 * 89.18508 * 10 9 7 12 12 N 1.46507 * 113.74534 * 220.05998 * 10 9 7 13 13 C 1.34778 * 119.99504 * 252.59623 * 12 10 9 14 14 O 1.21694 * 120.00167 * 359.97438 * 13 12 10 15 15 C 1.46429 * 119.99498 * 179.97438 * 13 12 10 16 16 C 1.34814 * 119.99926 * 179.97438 * 15 13 12 17 17 C 1.47202 * 120.00204 * 180.02562 * 16 15 13 18 18 C 1.39839 * 120.16923 * 359.71617 * 17 16 15 19 19 C 1.37892 * 119.82696 * 179.76697 * 18 17 16 20 20 C 1.38403 * 120.16765 * 0.49391 * 19 18 17 21 21 C 1.50700 * 119.82647 * 179.75738 * 20 19 18 22 22 O 1.42901 * 109.46922 * 120.02344 * 21 20 19 23 23 Si 1.86303 * 109.46875 * 0.02794 * 21 20 19 24 24 C 1.38402 * 120.34839 * 359.78881 * 20 19 18 25 25 C 1.37896 * 120.16580 * 359.95018 * 24 20 19 26 26 C 1.53785 * 113.61859 * 183.47213 * 7 6 5 27 27 H 1.09002 * 109.47011 * 180.02562 * 1 2 3 28 28 H 1.09001 * 109.47630 * 300.00318 * 1 2 3 29 29 H 1.08998 * 109.47321 * 60.00129 * 1 2 3 30 30 H 1.09002 * 109.47060 * 299.99765 * 5 3 2 31 31 H 1.09001 * 109.47380 * 59.99853 * 5 3 2 32 32 H 1.09002 * 109.47153 * 299.99998 * 6 5 3 33 33 H 1.08998 * 109.47533 * 59.99628 * 6 5 3 34 34 H 1.08998 * 113.61499 * 254.52816 * 9 7 6 35 35 H 1.08992 * 113.61922 * 25.43189 * 9 7 6 36 36 H 0.96989 * 119.99767 * 72.58574 * 12 10 9 37 37 H 1.07992 * 120.00009 * 359.97438 * 15 13 12 38 38 H 1.07998 * 119.99402 * 359.97438 * 16 15 13 39 39 H 1.08009 * 120.08481 * 0.02562 * 18 17 16 40 40 H 1.08002 * 119.91590 * 180.25731 * 19 18 17 41 41 H 1.08990 * 109.47524 * 240.02479 * 21 20 19 42 42 H 0.96703 * 114.00168 * 300.00396 * 22 21 20 43 43 H 1.48506 * 109.99846 * 179.97438 * 23 21 20 44 44 H 1.48497 * 110.00057 * 301.31534 * 23 21 20 45 45 H 1.07990 * 119.91639 * 179.97438 * 24 20 19 46 46 H 1.08002 * 120.08077 * 180.02562 * 25 24 20 47 47 H 1.08996 * 113.60914 * 334.56443 * 26 7 6 48 48 H 1.08992 * 113.61746 * 105.47098 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 -0.0006 6 6 4.0001 2.7421 -0.0011 7 6 5.5279 2.8222 -0.0011 8 1 5.9876 2.1394 0.7136 9 6 6.1484 2.7525 -1.4064 10 6 7.1396 3.8319 -0.9348 11 1 8.0410 3.4250 -0.4763 12 7 7.4268 4.8517 -1.9467 13 6 8.6232 4.8670 -2.5672 14 8 9.4649 4.0341 -2.2867 15 6 8.9100 5.8860 -3.5790 16 6 10.1068 5.9017 -4.1994 17 6 10.3954 6.9263 -5.2161 18 6 9.4286 7.8815 -5.5455 19 6 9.7082 8.8410 -6.4954 20 6 10.9382 8.8541 -7.1298 21 6 11.2336 9.9030 -8.1707 22 8 12.3620 10.6775 -7.7596 23 14 9.7536 11.0174 -8.3668 24 6 11.8982 7.9086 -6.8135 25 6 11.6355 6.9459 -5.8618 26 6 6.0695 4.2590 0.0838 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5139 0.8899 29 1 -0.3634 0.5138 -0.8900 30 1 3.9563 0.7806 0.8892 31 1 3.9557 0.7809 -0.8908 32 1 3.6100 3.2360 -0.8911 33 1 3.6107 3.2365 0.8888 34 1 6.6183 1.7945 -1.6292 35 1 5.4784 3.0903 -2.1969 36 1 6.7560 5.5156 -2.1700 37 1 8.1628 6.6248 -3.8282 38 1 10.8540 5.1630 -3.9498 39 1 8.4668 7.8701 -5.0540 40 1 8.9640 9.5819 -6.7479 41 1 11.4525 9.4189 -9.1224 42 1 12.2377 11.1376 -6.9182 43 1 10.0324 12.0567 -9.3903 44 1 8.5658 10.2193 -8.7632 45 1 12.8555 7.9250 -7.3131 46 1 12.3857 6.2090 -5.6158 47 1 5.3778 5.0096 -0.2986 48 1 6.4756 4.5155 1.0622 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475074_12360594.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:23:56 Heat of formation + Delta-G solvation = -94.177986 kcal Electronic energy + Delta-G solvation = -27901.243346 eV Core-core repulsion = 23695.612767 eV Total energy + Delta-G solvation = -4205.630579 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.166 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.52709 -41.12602 -40.66247 -39.51003 -37.82288 -37.53350 -35.19205 -35.02792 -33.33481 -32.28263 -31.26686 -29.15750 -27.54977 -26.85006 -26.56040 -24.52212 -24.03243 -22.87939 -21.91058 -21.44291 -21.07131 -20.16549 -18.86782 -18.55821 -18.07968 -17.65057 -17.51319 -17.36282 -16.92495 -16.61543 -16.29927 -16.21560 -15.91271 -15.74038 -15.34618 -15.15076 -14.95428 -14.64671 -14.53849 -14.17077 -14.10942 -13.92228 -13.85346 -13.55436 -13.40473 -13.31583 -13.08476 -13.03438 -12.76317 -12.40280 -12.28881 -12.05956 -12.01510 -11.77456 -11.76546 -11.69902 -11.39082 -11.35742 -11.29481 -10.85675 -10.49829 -10.07056 -10.02040 -9.29332 -5.10294 -0.58487 0.30704 0.88398 1.22318 1.22651 1.56559 1.73356 1.91344 2.21820 2.28186 2.76001 3.36742 3.39291 3.41491 3.50448 3.59218 3.66330 3.72959 3.74993 3.78064 3.81589 4.02581 4.09601 4.11375 4.15657 4.17067 4.24430 4.25259 4.37021 4.39090 4.44910 4.48136 4.58094 4.61892 4.63731 4.73203 4.75898 4.79710 4.89018 4.94503 5.01261 5.03192 5.07589 5.12121 5.29279 5.31765 5.40456 5.43199 5.54815 5.57612 5.81351 6.49792 6.52658 6.75723 7.26293 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.508 6.508 5 C -0.114 4.114 6 C -0.096 4.096 7 C -0.108 4.108 8 H 0.099 0.901 9 C -0.150 4.150 10 C 0.122 3.878 11 H 0.116 0.884 12 N -0.717 5.717 13 C 0.548 3.452 14 O -0.544 6.544 15 C -0.215 4.215 16 C -0.016 4.016 17 C -0.073 4.073 18 C -0.095 4.095 19 C -0.120 4.120 20 C -0.108 4.108 21 C -0.071 4.071 22 O -0.539 6.539 23 Si 0.689 3.311 24 C -0.095 4.095 25 C -0.092 4.092 26 C -0.141 4.141 27 H 0.103 0.897 28 H 0.063 0.937 29 H 0.063 0.937 30 H 0.107 0.893 31 H 0.107 0.893 32 H 0.074 0.926 33 H 0.076 0.924 34 H 0.074 0.926 35 H 0.086 0.914 36 H 0.402 0.598 37 H 0.130 0.870 38 H 0.138 0.862 39 H 0.132 0.868 40 H 0.130 0.870 41 H 0.115 0.885 42 H 0.380 0.620 43 H -0.254 1.254 44 H -0.258 1.258 45 H 0.131 0.869 46 H 0.132 0.868 47 H 0.088 0.912 48 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.411 1.124 1.763 3.191 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.278 6.278 3 C 0.301 3.699 4 O -0.396 6.396 5 C -0.151 4.151 6 C -0.134 4.134 7 C -0.127 4.127 8 H 0.117 0.883 9 C -0.189 4.189 10 C 0.017 3.983 11 H 0.134 0.866 12 N -0.366 5.366 13 C 0.338 3.662 14 O -0.423 6.423 15 C -0.236 4.236 16 C -0.035 4.035 17 C -0.073 4.073 18 C -0.113 4.113 19 C -0.137 4.137 20 C -0.108 4.108 21 C -0.182 4.182 22 O -0.344 6.344 23 Si 0.591 3.409 24 C -0.113 4.113 25 C -0.110 4.110 26 C -0.179 4.179 27 H 0.121 0.879 28 H 0.082 0.918 29 H 0.082 0.918 30 H 0.126 0.874 31 H 0.125 0.875 32 H 0.093 0.907 33 H 0.094 0.906 34 H 0.093 0.907 35 H 0.105 0.895 36 H 0.237 0.763 37 H 0.148 0.852 38 H 0.155 0.845 39 H 0.149 0.851 40 H 0.147 0.853 41 H 0.133 0.867 42 H 0.227 0.773 43 H -0.179 1.179 44 H -0.183 1.183 45 H 0.149 0.851 46 H 0.150 0.850 47 H 0.107 0.893 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -2.427 0.901 0.863 2.729 hybrid contribution -0.377 -0.243 -0.300 0.540 sum -2.804 0.658 0.563 2.935 Atomic orbital electron populations 1.23300 0.75988 1.03950 1.02673 1.86513 1.23762 1.33560 1.84003 1.23925 0.92425 0.81335 0.72188 1.90688 1.67379 1.36365 1.45149 1.21443 0.87171 1.00353 1.06159 1.21394 0.94252 0.93740 1.04018 1.22384 0.94716 0.97591 0.98042 0.88320 1.23620 0.98371 0.99947 0.96927 1.22553 0.97786 0.89017 0.88979 0.86583 1.45870 1.16314 1.33402 1.41058 1.18375 0.81816 0.84601 0.81430 1.90830 1.46469 1.40004 1.64980 1.22914 0.99307 1.01124 1.00229 1.22412 0.96337 0.94309 0.90461 1.19070 0.94738 0.96125 0.97392 1.21359 0.98975 0.94007 0.96984 1.20957 0.96318 0.99253 0.97183 1.20529 0.94494 0.97617 0.98180 1.25102 0.99445 0.95650 0.97984 1.86515 1.38618 1.65462 1.43838 0.94712 0.75988 0.81608 0.88592 1.20993 0.99359 0.93686 0.97240 1.21468 0.95957 0.98271 0.95301 1.23395 0.97552 0.97110 0.99826 0.87902 0.91776 0.91796 0.87432 0.87480 0.90736 0.90568 0.90705 0.89535 0.76328 0.85201 0.84465 0.85058 0.85275 0.86746 0.77291 1.17888 1.18272 0.85144 0.85048 0.89306 0.90385 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.48 10.56 -39.26 -0.41 -0.89 16 3 C 0.46 0.65 7.96 36.01 0.29 0.93 16 4 O -0.51 -2.22 15.73 -18.75 -0.29 -2.52 16 5 C -0.11 0.22 5.81 -27.88 -0.16 0.06 16 6 C -0.10 0.18 4.33 -26.74 -0.12 0.07 16 7 C -0.11 0.30 3.64 -89.81 -0.33 -0.03 16 8 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 9 C -0.15 0.27 7.45 -25.83 -0.19 0.08 16 10 C 0.12 -0.11 4.24 -67.02 -0.28 -0.40 16 11 H 0.12 0.10 7.46 -51.93 -0.39 -0.29 16 12 N -0.72 0.68 5.36 -54.31 -0.29 0.39 16 13 C 0.55 0.96 7.74 -12.96 -0.10 0.86 16 14 O -0.54 -3.15 15.83 5.19 0.08 -3.07 16 15 C -0.22 0.09 9.41 -37.50 -0.35 -0.26 16 16 C -0.02 0.00 9.46 -37.16 -0.35 -0.36 16 17 C -0.07 0.01 5.87 -105.06 -0.62 -0.61 16 18 C -0.10 0.11 9.41 -39.11 -0.37 -0.26 16 19 C -0.12 0.14 8.65 -39.65 -0.34 -0.20 16 20 C -0.11 0.05 5.40 -104.50 -0.56 -0.52 16 21 C -0.07 0.05 2.82 36.01 0.10 0.15 16 22 O -0.54 0.10 12.76 -35.23 -0.45 -0.35 16 23 Si 0.69 -1.07 29.77 -169.99 -5.06 -6.13 16 24 C -0.09 0.00 9.59 -39.65 -0.38 -0.38 16 25 C -0.09 0.01 9.80 -39.11 -0.38 -0.37 16 26 C -0.14 0.36 7.40 -25.91 -0.19 0.17 16 27 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 28 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 29 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 30 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 31 H 0.11 -0.33 8.14 -51.93 -0.42 -0.76 16 32 H 0.07 -0.08 7.83 -51.93 -0.41 -0.48 16 33 H 0.08 -0.07 8.10 -51.93 -0.42 -0.50 16 34 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 35 H 0.09 -0.16 7.92 -51.93 -0.41 -0.57 16 36 H 0.40 -1.45 8.71 -40.82 -0.36 -1.81 16 37 H 0.13 -0.42 6.07 -52.49 -0.32 -0.74 16 38 H 0.14 0.12 7.52 -52.49 -0.39 -0.27 16 39 H 0.13 -0.43 6.17 -52.48 -0.32 -0.76 16 40 H 0.13 -0.39 4.85 -52.49 -0.25 -0.64 16 41 H 0.12 -0.03 7.96 -51.93 -0.41 -0.44 16 42 H 0.38 -1.53 8.70 45.56 0.40 -1.13 16 43 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 44 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 45 H 0.13 -0.06 8.06 -52.49 -0.42 -0.49 16 46 H 0.13 -0.20 8.06 -52.49 -0.42 -0.62 16 47 H 0.09 -0.28 8.08 -51.93 -0.42 -0.70 16 48 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 LS Contribution 404.34 15.07 6.09 6.09 Total: 0.00 -10.05 404.34 -10.75 -20.80 By element: Atomic # 1 Polarization: -7.19 SS G_CDS: -7.13 Total: -14.32 kcal Atomic # 6 Polarization: 3.27 SS G_CDS: -3.28 Total: -0.01 kcal Atomic # 7 Polarization: 0.68 SS G_CDS: -0.29 Total: 0.39 kcal Atomic # 8 Polarization: -5.75 SS G_CDS: -1.08 Total: -6.82 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.06 Total: -6.13 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -10.05 -10.75 -20.80 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_12360594.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.377 kcal (2) G-P(sol) polarization free energy of solvation -10.054 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.431 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.747 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.801 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.178 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds