Wall clock time and date at job start Tue Mar 9 2021 13:25:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34227 * 116.99903 * 2 1 4 4 O 1.20829 * 120.00045 * 0.02562 * 3 2 1 5 5 C 1.50702 * 120.00287 * 180.02562 * 3 2 1 6 6 C 1.52995 * 109.47373 * 179.97438 * 5 3 2 7 7 C 1.52999 * 109.47060 * 179.97438 * 6 5 3 8 8 H 1.09004 * 112.90534 * 43.75112 * 7 6 5 9 9 C 1.53773 * 113.61440 * 174.99833 * 7 6 5 10 10 C 1.53781 * 87.08183 * 139.98451 * 9 7 6 11 11 H 1.09000 * 113.61575 * 89.20371 * 10 9 7 12 12 N 1.46506 * 113.61682 * 220.01951 * 10 9 7 13 13 C 1.34771 * 119.99948 * 203.46742 * 12 10 9 14 14 O 1.21516 * 120.00506 * 0.02562 * 13 12 10 15 15 C 1.48173 * 120.00018 * 180.02562 * 13 12 10 16 16 N 1.32720 * 119.71900 * 359.97438 * 15 13 12 17 17 C 1.31527 * 121.63967 * 180.02562 * 16 15 13 18 18 C 1.38554 * 120.90437 * 359.74068 * 17 16 15 19 19 C 1.50700 * 120.32821 * 180.26297 * 18 17 16 20 20 O 1.42897 * 109.47198 * 120.25072 * 19 18 17 21 21 Si 1.86304 * 109.46644 * 0.25323 * 19 18 17 22 22 C 1.38630 * 119.35247 * 0.51539 * 18 17 16 23 23 C 1.38592 * 118.48468 * 359.49784 * 22 18 17 24 24 C 1.53778 * 87.17048 * 334.61129 * 10 9 7 25 25 H 1.08997 * 109.46691 * 180.02562 * 1 2 3 26 26 H 1.09006 * 109.46969 * 300.00062 * 1 2 3 27 27 H 1.08997 * 109.47393 * 60.00052 * 1 2 3 28 28 H 1.09001 * 109.46637 * 59.99544 * 5 3 2 29 29 H 1.09001 * 109.46947 * 300.00485 * 5 3 2 30 30 H 1.09005 * 109.46915 * 60.00392 * 6 5 3 31 31 H 1.08993 * 109.47114 * 300.00207 * 6 5 3 32 32 H 1.09004 * 113.61778 * 25.44175 * 9 7 6 33 33 H 1.08996 * 113.62122 * 254.53404 * 9 7 6 34 34 H 0.97001 * 119.99910 * 23.47569 * 12 10 9 35 35 H 1.07999 * 119.54671 * 180.02562 * 17 16 15 36 36 H 1.08999 * 109.47154 * 240.25502 * 19 18 17 37 37 H 0.96701 * 114.00000 * 300.00341 * 20 19 18 38 38 H 1.48493 * 110.00015 * 58.67953 * 21 19 18 39 39 H 1.48503 * 109.99878 * 180.02562 * 21 19 18 40 40 H 1.08002 * 120.76024 * 179.77899 * 22 18 17 41 41 H 1.08002 * 120.47050 * 180.27502 * 23 22 18 42 42 H 1.09005 * 113.61535 * 139.93761 * 24 10 9 43 43 H 1.09003 * 113.61752 * 270.83528 * 24 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5664 1.2750 -0.0006 6 6 4.0001 2.7421 -0.0011 7 6 5.5280 2.8222 -0.0011 8 1 5.9897 2.1199 -0.6951 9 6 6.0697 4.2561 -0.1244 10 6 7.1384 3.8571 0.9069 11 1 8.0409 3.4391 0.4610 12 7 7.4228 4.9034 1.8922 13 6 8.6062 4.9183 2.5368 14 8 9.4376 4.0641 2.3006 15 6 8.8936 5.9762 3.5337 16 7 7.9818 6.9067 3.7871 17 6 8.1972 7.8631 4.6639 18 6 9.3910 7.9311 5.3639 19 6 9.6218 9.0292 6.3699 20 8 9.8593 8.4544 7.6564 21 14 8.1178 10.1260 6.4478 22 6 10.3733 6.9822 5.1260 23 6 10.1187 5.9861 4.1967 24 6 6.1484 2.7922 1.4076 25 1 -0.3632 -1.0277 0.0005 26 1 -0.3633 0.5139 0.8900 27 1 -0.3634 0.5138 -0.8899 28 1 3.9557 0.7810 -0.8908 29 1 3.9565 0.7806 0.8891 30 1 3.6107 3.2364 0.8890 31 1 3.6100 3.2360 -0.8910 32 1 5.3775 5.0169 0.2363 33 1 6.4772 4.4858 -1.1089 34 1 6.7592 5.5855 2.0806 35 1 7.4313 8.6029 4.8440 36 1 10.4873 9.6202 6.0706 37 1 9.1286 7.9138 7.9866 38 1 6.9247 9.3259 6.8238 39 1 8.3329 11.2134 7.4360 40 1 11.3136 7.0157 5.6562 41 1 10.8596 5.2280 3.9896 42 1 6.6194 1.8416 1.6580 43 1 5.4777 3.1519 2.1879 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475074_13287726.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:25:08 Heat of formation + Delta-G solvation = -94.984629 kcal Electronic energy + Delta-G solvation = -25719.332733 eV Core-core repulsion = 21732.005025 eV Total energy + Delta-G solvation = -3987.327709 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.145 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -41.91659 -41.45646 -40.79642 -39.38120 -38.07239 -37.51699 -35.24272 -33.99703 -33.17605 -32.88083 -29.18382 -28.07487 -26.87175 -26.60118 -25.07080 -24.28392 -22.95668 -21.78225 -21.39768 -20.84413 -19.11105 -18.76697 -18.53212 -17.83540 -17.62951 -17.47846 -16.97856 -16.68991 -16.48871 -16.34937 -16.10732 -16.06583 -15.45387 -15.19434 -14.61831 -14.50419 -14.41942 -14.30996 -14.04661 -13.88850 -13.53669 -13.51934 -13.35951 -13.06331 -12.75633 -12.73287 -12.38029 -12.16499 -12.01638 -11.75996 -11.68946 -11.37793 -11.30621 -11.22108 -11.13691 -10.79952 -10.63066 -10.34928 -9.99011 -5.11733 -0.58779 0.03858 1.07270 1.24482 1.44409 1.62647 1.74747 1.82689 2.04887 2.68020 2.93415 3.14389 3.39884 3.40526 3.43232 3.60922 3.67276 3.72845 3.75850 3.78854 3.90585 4.04676 4.10942 4.13885 4.17463 4.25771 4.32836 4.40201 4.49925 4.51662 4.56330 4.62646 4.66800 4.75140 4.80582 4.84557 4.93394 4.96762 5.03731 5.13027 5.29777 5.33709 5.44659 5.54888 6.18556 6.34090 6.63142 6.77505 7.15079 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.508 6.508 5 C -0.114 4.114 6 C -0.097 4.097 7 C -0.108 4.108 8 H 0.099 0.901 9 C -0.139 4.139 10 C 0.119 3.881 11 H 0.117 0.883 12 N -0.700 5.700 13 C 0.573 3.427 14 O -0.530 6.530 15 C 0.080 3.920 16 N -0.453 5.453 17 C 0.103 3.897 18 C -0.149 4.149 19 C -0.074 4.074 20 O -0.526 6.526 21 Si 0.685 3.315 22 C -0.053 4.053 23 C -0.108 4.108 24 C -0.150 4.150 25 H 0.102 0.898 26 H 0.063 0.937 27 H 0.064 0.936 28 H 0.107 0.893 29 H 0.107 0.893 30 H 0.075 0.925 31 H 0.076 0.924 32 H 0.090 0.910 33 H 0.079 0.921 34 H 0.412 0.588 35 H 0.164 0.836 36 H 0.126 0.874 37 H 0.378 0.622 38 H -0.255 1.255 39 H -0.251 1.251 40 H 0.148 0.852 41 H 0.153 0.847 42 H 0.075 0.925 43 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.115 0.895 -1.076 1.789 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.395 6.395 5 C -0.151 4.151 6 C -0.134 4.134 7 C -0.127 4.127 8 H 0.117 0.883 9 C -0.178 4.178 10 C 0.014 3.986 11 H 0.135 0.865 12 N -0.350 5.350 13 C 0.358 3.642 14 O -0.405 6.405 15 C -0.058 4.058 16 N -0.164 5.164 17 C -0.056 4.056 18 C -0.151 4.151 19 C -0.184 4.184 20 O -0.332 6.332 21 Si 0.585 3.415 22 C -0.079 4.079 23 C -0.129 4.129 24 C -0.188 4.188 25 H 0.121 0.879 26 H 0.082 0.918 27 H 0.082 0.918 28 H 0.126 0.874 29 H 0.125 0.875 30 H 0.093 0.907 31 H 0.095 0.905 32 H 0.109 0.891 33 H 0.097 0.903 34 H 0.249 0.751 35 H 0.181 0.819 36 H 0.143 0.857 37 H 0.226 0.774 38 H -0.179 1.179 39 H -0.176 1.176 40 H 0.166 0.834 41 H 0.170 0.830 42 H 0.094 0.906 43 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -1.627 1.135 -1.296 2.370 hybrid contribution 0.244 -0.534 1.368 1.489 sum -1.383 0.601 0.073 1.510 Atomic orbital electron populations 1.23300 0.76002 1.03933 1.02672 1.86514 1.23750 1.33572 1.84018 1.23930 0.92432 0.81333 0.72202 1.90691 1.67374 1.36360 1.45118 1.21447 0.87165 1.00365 1.06139 1.21398 0.94218 0.93730 1.04091 1.22411 0.94754 0.97611 0.97893 0.88261 1.23389 0.97472 0.97248 0.99642 1.22614 0.97981 0.88579 0.89376 0.86487 1.45842 1.17316 1.31015 1.40877 1.17892 0.82259 0.83677 0.80384 1.90812 1.46775 1.38204 1.64751 1.21206 0.91870 0.95053 0.97664 1.67530 1.31868 1.01972 1.15027 1.22616 0.95400 0.95550 0.92023 1.21594 0.95568 0.98682 0.99304 1.25016 1.13106 0.97850 0.82419 1.86634 1.45184 1.69074 1.32330 0.95031 0.75157 0.80806 0.90524 1.21563 0.99359 0.92093 0.94877 1.22231 0.97274 0.98782 0.94612 1.23630 0.98344 0.99867 0.96987 0.87917 0.91808 0.91770 0.87439 0.87485 0.90680 0.90510 0.89126 0.90260 0.75101 0.81896 0.85657 0.77419 1.17941 1.17567 0.83442 0.82973 0.90619 0.89436 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.52 10.57 -39.25 -0.41 -0.93 16 3 C 0.46 0.72 7.96 36.01 0.29 1.00 16 4 O -0.51 -2.32 15.73 -18.75 -0.29 -2.61 16 5 C -0.11 0.21 5.80 -27.88 -0.16 0.05 16 6 C -0.10 0.16 4.34 -26.73 -0.12 0.04 16 7 C -0.11 0.28 3.65 -89.72 -0.33 -0.05 16 8 H 0.10 -0.33 8.13 -51.93 -0.42 -0.75 16 9 C -0.14 0.31 7.39 -25.92 -0.19 0.12 16 10 C 0.12 -0.07 4.21 -67.12 -0.28 -0.35 16 11 H 0.12 0.08 7.50 -51.93 -0.39 -0.31 16 12 N -0.70 -0.27 5.35 -53.85 -0.29 -0.55 16 13 C 0.57 1.58 7.81 -12.18 -0.10 1.49 16 14 O -0.53 -2.97 15.94 5.35 0.09 -2.89 16 15 C 0.08 0.14 6.75 -83.01 -0.56 -0.42 16 16 N -0.45 -0.36 9.54 -9.80 -0.09 -0.46 16 17 C 0.10 -0.09 9.84 -17.57 -0.17 -0.26 16 18 C -0.15 0.18 5.40 -104.36 -0.56 -0.38 16 19 C -0.07 0.15 2.83 36.01 0.10 0.25 16 20 O -0.53 0.24 12.78 -35.23 -0.45 -0.21 16 21 Si 0.68 -1.78 29.82 -169.99 -5.07 -6.85 16 22 C -0.05 0.03 9.76 -39.31 -0.38 -0.35 16 23 C -0.11 -0.08 9.63 -39.06 -0.38 -0.46 16 24 C -0.15 0.22 7.44 -25.83 -0.19 0.03 16 25 H 0.10 -0.28 8.14 -51.93 -0.42 -0.71 16 26 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 27 H 0.06 -0.02 8.13 -51.93 -0.42 -0.45 16 28 H 0.11 -0.36 8.14 -51.93 -0.42 -0.79 16 29 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 30 H 0.07 -0.05 7.81 -51.93 -0.41 -0.46 16 31 H 0.08 -0.06 8.10 -51.93 -0.42 -0.48 16 32 H 0.09 -0.22 8.07 -51.93 -0.42 -0.64 16 33 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 34 H 0.41 -0.36 8.04 -40.82 -0.33 -0.69 16 35 H 0.16 -0.52 4.89 -52.49 -0.26 -0.78 16 36 H 0.13 -0.37 7.96 -51.93 -0.41 -0.78 16 37 H 0.38 -1.19 8.70 45.56 0.40 -0.79 16 38 H -0.25 0.18 7.11 56.52 0.40 0.58 16 39 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 40 H 0.15 -0.29 8.06 -52.49 -0.42 -0.71 16 41 H 0.15 0.07 7.64 -52.49 -0.40 -0.33 16 42 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 43 H 0.09 -0.11 7.90 -51.93 -0.41 -0.52 16 LS Contribution 367.11 15.07 5.53 5.53 Total: 0.00 -8.95 367.11 -9.01 -17.96 By element: Atomic # 1 Polarization: -4.68 SS G_CDS: -6.05 Total: -10.73 kcal Atomic # 6 Polarization: 3.73 SS G_CDS: -1.97 Total: 1.76 kcal Atomic # 7 Polarization: -0.63 SS G_CDS: -0.38 Total: -1.01 kcal Atomic # 8 Polarization: -5.58 SS G_CDS: -1.07 Total: -6.65 kcal Atomic # 14 Polarization: -1.78 SS G_CDS: -5.07 Total: -6.85 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -8.95 -9.01 -17.96 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_13287726.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.028 kcal (2) G-P(sol) polarization free energy of solvation -8.946 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.975 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.010 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.956 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.985 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds