Wall clock time and date at job start Tue Mar 9 2021 13:25:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34222 * 117.00137 * 2 1 4 4 O 1.20833 * 119.99852 * 0.02562 * 3 2 1 5 5 C 1.50696 * 120.00432 * 179.71953 * 3 2 1 6 6 C 1.52996 * 109.47298 * 180.27351 * 5 3 2 7 7 C 1.53005 * 109.46952 * 180.02562 * 6 5 3 8 8 H 1.08999 * 112.85221 * 316.19692 * 7 6 5 9 9 C 1.53778 * 113.61376 * 87.50870 * 7 6 5 10 10 C 1.53779 * 87.08464 * 139.98150 * 9 7 6 11 11 H 1.08998 * 113.61636 * 89.11455 * 10 9 7 12 12 N 1.46496 * 113.68856 * 220.01231 * 10 9 7 13 13 C 1.34787 * 119.99624 * 252.53015 * 12 10 9 14 14 O 1.21589 * 119.99879 * 0.02562 * 13 12 10 15 15 C 1.47538 * 119.99611 * 180.02562 * 13 12 10 16 16 C 1.40139 * 120.18692 * 180.02562 * 15 13 12 17 17 O 1.35651 * 120.15284 * 0.02562 * 16 15 13 18 18 C 1.38708 * 119.69746 * 180.02562 * 16 15 13 19 19 C 1.50702 * 119.95516 * 179.97438 * 18 16 15 20 20 O 1.42901 * 109.46983 * 75.00354 * 19 18 16 21 21 Si 1.86305 * 109.47105 * 194.99851 * 19 18 16 22 22 C 1.38053 * 120.08538 * 0.02562 * 18 16 15 23 23 C 1.38547 * 120.39152 * 0.02562 * 22 18 16 24 24 C 1.50699 * 119.84865 * 179.97438 * 23 22 18 25 25 C 1.37789 * 120.29831 * 359.67745 * 23 22 18 26 26 C 1.53780 * 113.61528 * 185.00355 * 7 6 5 27 27 H 1.08997 * 109.47403 * 60.00337 * 1 2 3 28 28 H 1.09007 * 109.47110 * 179.97438 * 1 2 3 29 29 H 1.08997 * 109.47380 * 299.99656 * 1 2 3 30 30 H 1.09000 * 109.47190 * 300.28287 * 5 3 2 31 31 H 1.09006 * 109.46468 * 60.27870 * 5 3 2 32 32 H 1.08994 * 109.47515 * 300.00215 * 6 5 3 33 33 H 1.09006 * 109.46938 * 60.00806 * 6 5 3 34 34 H 1.09001 * 113.61187 * 254.53373 * 9 7 6 35 35 H 1.09003 * 113.61242 * 25.42557 * 9 7 6 36 36 H 0.96999 * 120.00899 * 72.53422 * 12 10 9 37 37 H 0.96699 * 114.00025 * 89.99386 * 17 16 15 38 38 H 1.08995 * 109.47558 * 315.00487 * 19 18 16 39 39 H 0.96692 * 114.00566 * 60.00014 * 20 19 18 40 40 H 1.48503 * 109.99621 * 58.68299 * 21 19 18 41 41 H 1.48498 * 110.00072 * 179.97438 * 21 19 18 42 42 H 1.08005 * 119.80179 * 179.97438 * 22 18 16 43 43 H 1.08996 * 109.46665 * 90.00471 * 24 23 22 44 44 H 1.09003 * 109.46894 * 209.99755 * 24 23 22 45 45 H 1.08997 * 109.47241 * 330.00070 * 24 23 22 46 46 H 1.07998 * 120.04862 * 180.32027 * 25 23 22 47 47 H 1.09003 * 113.61128 * 334.56982 * 26 7 6 48 48 H 1.09000 * 113.61676 * 105.38254 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0064 6 6 4.0000 2.7420 0.0119 7 6 5.5280 2.8221 0.0177 8 1 5.9861 2.1185 0.7128 9 6 6.1515 2.7970 -1.3877 10 6 7.1417 3.8592 -0.8819 11 1 8.0420 3.4388 -0.4338 12 7 7.4309 4.9086 -1.8624 13 6 8.6287 4.9425 -2.4796 14 8 9.4688 4.1019 -2.2229 15 6 8.9201 5.9996 -3.4666 16 6 10.1639 6.0383 -4.1111 17 8 11.1060 5.1034 -3.8308 18 6 10.4274 7.0371 -5.0370 19 6 11.7632 7.0846 -5.7330 20 8 11.8191 6.0593 -6.7269 21 14 11.9822 8.7477 -6.5436 22 6 9.4678 7.9882 -5.3208 23 6 8.2373 7.9539 -4.6850 24 6 7.1991 8.9986 -5.0037 25 6 7.9564 6.9654 -3.7671 26 6 6.0692 4.2557 0.1465 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 3.9524 0.7784 0.8966 31 1 3.9596 0.7831 -0.8834 32 1 3.6139 3.2385 -0.8783 33 1 3.6067 3.2338 0.9017 34 1 6.6218 1.8465 -1.6398 35 1 5.4829 3.1597 -2.1685 36 1 6.7606 5.5790 -2.0674 37 1 11.0611 4.3187 -4.3940 38 1 12.5584 6.9279 -5.0043 39 1 11.1387 6.1357 -7.4097 40 1 11.8942 9.8246 -5.5249 41 1 13.2961 8.8075 -7.2331 42 1 9.6780 8.7640 -6.0422 43 1 6.5780 8.6532 -5.8301 44 1 6.5746 9.1696 -4.1268 45 1 7.6935 9.9285 -5.2846 46 1 6.9941 6.9396 -3.2777 47 1 5.3782 5.0174 -0.2149 48 1 6.4717 4.4836 1.1335 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475074_13422088.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:25:55 Heat of formation + Delta-G solvation = -152.071234 kcal Electronic energy + Delta-G solvation = -30332.878180 eV Core-core repulsion = 25934.281110 eV Total energy + Delta-G solvation = -4398.597070 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.80615 -41.45831 -40.69686 -39.23040 -38.00245 -37.61813 -37.50903 -35.16822 -33.67728 -33.12141 -32.39150 -29.14304 -27.70261 -27.09435 -26.79277 -26.73825 -25.18130 -23.03828 -22.05627 -21.61933 -21.37563 -20.65601 -19.52302 -18.58306 -18.33060 -17.91835 -17.65313 -17.51008 -17.39686 -16.84920 -16.71724 -16.28202 -16.09631 -15.91941 -15.54640 -15.36661 -15.02095 -14.86153 -14.61837 -14.53655 -14.22050 -14.09962 -13.92881 -13.74824 -13.56467 -13.39639 -13.36241 -13.09030 -13.07114 -12.78692 -12.65908 -12.39120 -12.13947 -12.06839 -12.01528 -11.77963 -11.72363 -11.65982 -11.38581 -11.29897 -10.80278 -10.40907 -10.20034 -9.97783 -9.54096 -5.10445 -0.35198 0.02634 1.22066 1.22110 1.60063 1.72615 1.76695 1.94159 2.12957 2.56560 3.19472 3.36211 3.38217 3.40540 3.48497 3.55314 3.62559 3.65595 3.73566 3.76681 4.01460 4.03443 4.06862 4.10737 4.15654 4.24017 4.24658 4.38223 4.46613 4.47431 4.53540 4.54829 4.57544 4.61037 4.62307 4.70092 4.72861 4.79584 4.88891 4.93941 4.94671 5.00591 5.09537 5.15778 5.27514 5.28723 5.42601 5.52427 5.57040 6.47761 6.50915 6.75176 6.77882 7.24711 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.508 6.508 5 C -0.114 4.114 6 C -0.096 4.096 7 C -0.108 4.108 8 H 0.099 0.901 9 C -0.149 4.149 10 C 0.123 3.877 11 H 0.117 0.883 12 N -0.719 5.719 13 C 0.560 3.440 14 O -0.518 6.518 15 C -0.165 4.165 16 C 0.191 3.809 17 O -0.473 6.473 18 C -0.154 4.154 19 C -0.062 4.062 20 O -0.537 6.537 21 Si 0.684 3.316 22 C -0.073 4.073 23 C -0.098 4.098 24 C -0.117 4.117 25 C -0.067 4.067 26 C -0.141 4.141 27 H 0.063 0.937 28 H 0.103 0.897 29 H 0.064 0.936 30 H 0.108 0.892 31 H 0.107 0.893 32 H 0.074 0.926 33 H 0.076 0.924 34 H 0.075 0.925 35 H 0.086 0.914 36 H 0.399 0.601 37 H 0.400 0.600 38 H 0.119 0.881 39 H 0.377 0.623 40 H -0.256 1.256 41 H -0.252 1.252 42 H 0.137 0.863 43 H 0.077 0.923 44 H 0.070 0.930 45 H 0.072 0.928 46 H 0.131 0.869 47 H 0.088 0.912 48 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.581 1.317 -2.887 6.420 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.278 6.278 3 C 0.301 3.699 4 O -0.396 6.396 5 C -0.151 4.151 6 C -0.134 4.134 7 C -0.127 4.127 8 H 0.117 0.883 9 C -0.188 4.188 10 C 0.018 3.982 11 H 0.135 0.865 12 N -0.371 5.371 13 C 0.347 3.653 14 O -0.393 6.393 15 C -0.169 4.169 16 C 0.144 3.856 17 O -0.284 6.284 18 C -0.155 4.155 19 C -0.173 4.173 20 O -0.342 6.342 21 Si 0.585 3.415 22 C -0.091 4.091 23 C -0.098 4.098 24 C -0.174 4.174 25 C -0.086 4.086 26 C -0.179 4.179 27 H 0.082 0.918 28 H 0.121 0.879 29 H 0.082 0.918 30 H 0.126 0.874 31 H 0.125 0.875 32 H 0.093 0.907 33 H 0.094 0.906 34 H 0.093 0.907 35 H 0.105 0.895 36 H 0.234 0.766 37 H 0.259 0.741 38 H 0.136 0.864 39 H 0.224 0.776 40 H -0.180 1.180 41 H -0.176 1.176 42 H 0.154 0.846 43 H 0.095 0.905 44 H 0.089 0.911 45 H 0.091 0.909 46 H 0.149 0.851 47 H 0.106 0.894 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -4.019 1.917 -1.939 4.857 hybrid contribution -0.693 -0.372 0.178 0.806 sum -4.711 1.546 -1.761 5.262 Atomic orbital electron populations 1.23302 0.75978 1.03957 1.02670 1.86513 1.23768 1.33553 1.83993 1.23922 0.92421 0.81338 0.72186 1.90690 1.67380 1.36366 1.45163 1.21446 0.87184 1.00336 1.06167 1.21398 0.94222 0.93759 1.04015 1.22383 0.94722 0.97608 0.97987 0.88269 1.23595 0.98324 0.99993 0.96885 1.22527 0.97820 0.88463 0.89353 0.86500 1.45914 1.16123 1.31893 1.43145 1.18072 0.81937 0.84459 0.80814 1.90833 1.45956 1.39259 1.63296 1.20413 0.95165 0.99117 1.02212 1.18228 0.86118 0.90299 0.90957 1.84678 1.51259 1.30943 1.61562 1.20708 0.97885 0.97685 0.99190 1.25017 0.95670 1.03277 0.93321 1.86540 1.57549 1.51171 1.38964 0.95166 0.86130 0.74758 0.85413 1.20987 0.92507 0.97154 0.98407 1.19801 0.95566 0.97284 0.97122 1.20841 0.97093 0.96745 1.02688 1.21127 0.98056 0.92961 0.96466 1.23405 0.97514 0.97207 0.99820 0.91796 0.87897 0.91772 0.87426 0.87472 0.90730 0.90560 0.90662 0.89529 0.76559 0.74109 0.86351 0.77595 1.18007 1.17639 0.84588 0.90465 0.91095 0.90906 0.85128 0.89357 0.90355 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.44 10.56 -39.24 -0.41 -0.86 16 3 C 0.46 0.61 7.96 36.00 0.29 0.89 16 4 O -0.51 -2.17 15.73 -18.76 -0.30 -2.46 16 5 C -0.11 0.23 5.80 -27.89 -0.16 0.07 16 6 C -0.10 0.19 4.34 -26.73 -0.12 0.07 16 7 C -0.11 0.29 3.65 -89.81 -0.33 -0.04 16 8 H 0.10 -0.32 8.13 -51.93 -0.42 -0.74 16 9 C -0.15 0.27 7.43 -25.92 -0.19 0.08 16 10 C 0.12 -0.08 4.24 -67.12 -0.28 -0.37 16 11 H 0.12 0.15 7.46 -51.93 -0.39 -0.24 16 12 N -0.72 0.25 5.31 -54.06 -0.29 -0.04 16 13 C 0.56 1.60 7.76 -12.46 -0.10 1.50 16 14 O -0.52 -3.39 14.76 -16.59 -0.24 -3.63 16 15 C -0.17 -0.27 5.89 -104.84 -0.62 -0.88 16 16 C 0.19 0.47 6.69 -38.69 -0.26 0.21 16 17 O -0.47 -1.84 10.91 -40.53 -0.44 -2.28 16 18 C -0.15 -0.08 5.27 -104.51 -0.55 -0.63 16 19 C -0.06 -0.02 2.38 36.01 0.09 0.07 16 20 O -0.54 -0.04 12.88 -35.23 -0.45 -0.49 16 21 Si 0.68 -0.74 29.91 -169.99 -5.08 -5.83 16 22 C -0.07 0.10 8.30 -39.54 -0.33 -0.23 16 23 C -0.10 0.17 5.87 -104.67 -0.61 -0.45 16 24 C -0.12 0.45 10.00 36.01 0.36 0.81 16 25 C -0.07 0.08 9.18 -39.20 -0.36 -0.28 16 26 C -0.14 0.34 7.39 -25.92 -0.19 0.14 16 27 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 28 H 0.10 -0.30 8.14 -51.93 -0.42 -0.73 16 29 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 30 H 0.11 -0.37 8.14 -51.93 -0.42 -0.80 16 31 H 0.11 -0.34 8.14 -51.93 -0.42 -0.77 16 32 H 0.07 -0.09 7.80 -51.93 -0.41 -0.49 16 33 H 0.08 -0.08 8.10 -51.93 -0.42 -0.50 16 34 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 35 H 0.09 -0.18 7.89 -51.93 -0.41 -0.59 16 36 H 0.40 -1.16 6.76 -40.82 -0.28 -1.43 16 37 H 0.40 0.45 9.06 45.56 0.41 0.86 16 38 H 0.12 0.25 7.83 -51.93 -0.41 -0.16 16 39 H 0.38 -1.56 8.70 45.56 0.40 -1.17 16 40 H -0.26 -0.38 7.11 56.52 0.40 0.03 16 41 H -0.25 -0.57 7.11 56.52 0.40 -0.17 16 42 H 0.14 -0.54 5.10 -52.48 -0.27 -0.80 16 43 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 44 H 0.07 -0.31 8.08 -51.93 -0.42 -0.73 16 45 H 0.07 -0.32 8.08 -51.93 -0.42 -0.74 16 46 H 0.13 -0.50 6.40 -52.49 -0.34 -0.83 16 47 H 0.09 -0.27 8.08 -51.93 -0.42 -0.69 16 48 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 LS Contribution 399.58 15.07 6.02 6.02 Total: 0.00 -11.16 399.58 -9.86 -21.02 By element: Atomic # 1 Polarization: -7.12 SS G_CDS: -6.36 Total: -13.48 kcal Atomic # 6 Polarization: 4.33 SS G_CDS: -2.30 Total: 2.03 kcal Atomic # 7 Polarization: 0.25 SS G_CDS: -0.29 Total: -0.04 kcal Atomic # 8 Polarization: -7.87 SS G_CDS: -1.85 Total: -9.72 kcal Atomic # 14 Polarization: -0.74 SS G_CDS: -5.08 Total: -5.83 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -11.16 -9.86 -21.02 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_13422088.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -131.052 kcal (2) G-P(sol) polarization free energy of solvation -11.158 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -142.210 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.861 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.019 kcal (6) G-S(sol) free energy of system = (1) + (5) -152.071 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds