Wall clock time and date at job start Tue Mar 9 2021 13:27:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34228 * 117.00372 * 2 1 4 4 O 1.20829 * 119.99521 * 0.02562 * 3 2 1 5 5 C 1.50696 * 120.00201 * 179.97438 * 3 2 1 6 6 C 1.53001 * 109.47042 * 179.97438 * 5 3 2 7 7 C 1.52998 * 109.47171 * 180.02562 * 6 5 3 8 8 H 1.09007 * 112.85381 * 316.19901 * 7 6 5 9 9 C 1.53952 * 113.66925 * 87.44169 * 7 6 5 10 10 C 1.53770 * 87.02355 * 139.93406 * 9 7 6 11 11 H 1.09003 * 113.61762 * 89.22963 * 10 9 7 12 12 N 1.46505 * 113.61601 * 220.05130 * 10 9 7 13 13 C 1.34777 * 120.00115 * 254.13569 * 12 10 9 14 14 O 1.21288 * 119.99593 * 359.97438 * 13 12 10 15 15 C 1.50697 * 120.00369 * 179.97438 * 13 12 10 16 16 C 1.53001 * 109.47291 * 179.97438 * 15 13 12 17 17 C 1.53000 * 109.46886 * 179.97438 * 16 15 13 18 18 O 1.42903 * 109.46726 * 180.02562 * 17 16 15 19 19 C 1.35904 * 116.99628 * 180.02562 * 18 17 16 20 20 C 1.38707 * 120.05375 * 179.72747 * 19 18 17 21 21 C 1.38170 * 119.94471 * 179.76683 * 20 19 18 22 22 C 1.50704 * 119.97397 * 180.22942 * 21 20 19 23 23 O 1.42894 * 109.47307 * 300.25799 * 22 21 20 24 24 Si 1.86293 * 109.47051 * 180.25402 * 22 21 20 25 25 C 1.38243 * 120.05353 * 0.48516 * 21 20 19 26 26 C 1.38283 * 120.11105 * 359.77103 * 25 21 20 27 27 C 1.38129 * 120.05835 * 359.97438 * 26 25 21 28 28 C 1.53776 * 87.17438 * 334.63953 * 10 9 7 29 29 H 1.08996 * 109.46854 * 180.02562 * 1 2 3 30 30 H 1.09002 * 109.46937 * 299.99811 * 1 2 3 31 31 H 1.09000 * 109.46718 * 60.00249 * 1 2 3 32 32 H 1.09003 * 109.47439 * 60.00087 * 5 3 2 33 33 H 1.09001 * 109.47165 * 300.00043 * 5 3 2 34 34 H 1.09000 * 109.47360 * 60.00402 * 6 5 3 35 35 H 1.09001 * 109.47216 * 300.00061 * 6 5 3 36 36 H 1.09004 * 113.61219 * 25.41279 * 9 7 6 37 37 H 1.09005 * 113.67065 * 254.46488 * 9 7 6 38 38 H 0.97003 * 120.00244 * 74.13539 * 12 10 9 39 39 H 1.09001 * 109.46613 * 59.99889 * 15 13 12 40 40 H 1.09002 * 109.47120 * 300.00240 * 15 13 12 41 41 H 1.09001 * 109.46652 * 60.00253 * 16 15 13 42 42 H 1.08992 * 109.47514 * 300.00342 * 16 15 13 43 43 H 1.09002 * 109.47398 * 300.00496 * 17 16 15 44 44 H 1.09001 * 109.47194 * 60.00677 * 17 16 15 45 45 H 1.08007 * 120.02988 * 359.97438 * 20 19 18 46 46 H 1.08996 * 109.46739 * 60.25524 * 22 21 20 47 47 H 0.96709 * 114.00064 * 299.99681 * 23 22 21 48 48 H 1.48503 * 110.00234 * 179.97438 * 24 22 21 49 49 H 1.48503 * 110.00353 * 301.31997 * 24 22 21 50 50 H 1.08002 * 119.94319 * 179.74211 * 25 21 20 51 51 H 1.08006 * 119.97542 * 179.97438 * 26 25 21 52 52 H 1.07997 * 120.02708 * 179.97438 * 27 26 25 53 53 H 1.08998 * 113.61830 * 139.93456 * 28 10 9 54 54 H 1.09002 * 113.61794 * 270.84581 * 28 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 0.0006 6 6 4.0002 2.7420 -0.0002 7 6 5.5281 2.8220 -0.0002 8 1 5.9888 2.1205 0.6954 9 6 6.1486 2.7908 -1.4088 10 6 7.1385 3.8561 -0.9091 11 1 8.0410 3.4384 -0.4629 12 7 7.4229 4.9016 -1.8953 13 6 8.6063 4.9159 -2.5400 14 8 9.4361 4.0635 -2.3034 15 6 8.8987 5.9909 -3.5548 16 6 10.2990 5.7787 -4.1337 17 6 10.5954 6.8698 -5.1644 18 8 11.9030 6.6712 -5.7055 19 6 12.3250 7.5612 -6.6419 20 6 13.5859 7.4316 -7.2052 21 6 14.0107 8.3349 -8.1605 22 6 15.3785 8.1917 -8.7767 23 8 16.3726 8.2710 -7.7533 24 14 15.6490 9.5590 -10.0127 25 6 13.1840 9.3731 -8.5477 26 6 11.9286 9.5076 -7.9838 27 6 11.4972 8.6041 -7.0322 28 6 6.0699 4.2561 0.1218 29 1 -0.3633 -1.0276 0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 3.9565 0.7805 -0.8892 33 1 3.9557 0.7808 0.8908 34 1 3.6102 3.2367 0.8893 35 1 3.6109 3.2355 -0.8907 36 1 5.4779 3.1499 -2.1894 37 1 6.6195 1.8400 -1.6586 38 1 6.7594 5.5835 -2.0842 39 1 8.8490 6.9678 -3.0737 40 1 8.1623 5.9432 -4.3570 41 1 10.3489 4.8018 -4.6146 42 1 11.0350 5.8267 -3.3312 43 1 9.8593 6.8214 -5.9668 44 1 10.5453 7.8469 -4.6838 45 1 14.2338 6.6232 -6.8997 46 1 15.4511 7.2275 -9.2798 47 1 16.3666 9.1044 -7.2628 48 1 16.9948 9.4294 -10.6271 49 1 14.6025 9.5069 -11.0651 50 1 13.5195 10.0806 -9.2916 51 1 11.2847 10.3198 -8.2876 52 1 10.5168 8.7098 -6.5918 53 1 6.4774 4.4865 1.1062 54 1 5.3776 5.0165 -0.2394 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14475074_4549616.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:27:03 Heat of formation + Delta-G solvation = -156.136582 kcal Electronic energy + Delta-G solvation = -32229.714826 eV Core-core repulsion = 27519.866232 eV Total energy + Delta-G solvation = -4709.848595 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.197 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -41.59056 -41.31728 -41.09586 -39.63834 -39.13815 -37.64477 -37.29575 -35.16420 -34.88808 -33.25869 -32.44179 -31.23143 -29.22195 -28.41198 -26.95159 -26.71022 -26.44243 -24.03554 -23.64688 -22.72598 -21.85664 -21.54805 -21.39891 -20.50151 -19.17945 -18.63328 -18.09991 -17.82073 -17.69884 -17.52715 -17.46715 -17.21738 -17.03291 -16.79006 -16.40059 -16.24180 -16.10437 -15.46076 -15.38814 -15.10491 -14.76560 -14.68312 -14.55379 -14.23367 -14.18875 -14.10668 -13.82241 -13.45942 -13.39190 -13.31433 -13.18539 -13.04714 -13.01426 -12.74772 -12.66991 -12.32640 -12.25911 -12.24134 -11.97213 -11.91137 -11.82836 -11.70257 -11.62065 -11.58810 -11.38933 -11.18449 -10.86034 -10.50808 -10.00636 -9.90791 -9.24229 -4.98752 0.21949 0.41137 1.14171 1.30005 1.61260 1.65114 1.76657 1.92436 2.01803 2.43280 2.69036 3.50051 3.52117 3.54277 3.63688 3.67851 3.73789 3.84249 3.85860 3.86137 3.89960 3.98646 4.11367 4.15097 4.21514 4.24041 4.25332 4.25992 4.29721 4.35338 4.40879 4.42188 4.51650 4.54637 4.62785 4.64295 4.66944 4.69193 4.74263 4.79563 4.88395 4.94600 4.99090 5.00887 5.07437 5.12579 5.17489 5.23872 5.29278 5.36279 5.39112 5.44785 5.45729 5.64867 5.75218 6.43163 6.56726 6.68099 6.74487 7.27092 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.369 6.369 3 C 0.456 3.544 4 O -0.544 6.544 5 C -0.111 4.111 6 C -0.090 4.090 7 C -0.099 4.099 8 H 0.106 0.894 9 C -0.146 4.146 10 C 0.112 3.888 11 H 0.091 0.909 12 N -0.709 5.709 13 C 0.508 3.492 14 O -0.591 6.591 15 C -0.128 4.128 16 C -0.102 4.102 17 C 0.058 3.942 18 O -0.340 6.340 19 C 0.116 3.884 20 C -0.153 4.153 21 C -0.084 4.084 22 C -0.084 4.084 23 O -0.557 6.557 24 Si 0.793 3.207 25 C -0.161 4.161 26 C -0.072 4.072 27 C -0.206 4.206 28 C -0.131 4.131 29 H 0.127 0.873 30 H 0.060 0.940 31 H 0.060 0.940 32 H 0.122 0.878 33 H 0.126 0.874 34 H 0.068 0.932 35 H 0.067 0.933 36 H 0.091 0.909 37 H 0.065 0.935 38 H 0.418 0.582 39 H 0.128 0.872 40 H 0.126 0.874 41 H 0.058 0.942 42 H 0.060 0.940 43 H 0.082 0.918 44 H 0.085 0.915 45 H 0.115 0.885 46 H 0.102 0.898 47 H 0.395 0.605 48 H -0.300 1.300 49 H -0.281 1.281 50 H 0.148 0.852 51 H 0.160 0.840 52 H 0.153 0.847 53 H 0.079 0.921 54 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.195 5.475 0.787 8.305 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.286 6.286 3 C 0.301 3.699 4 O -0.434 6.434 5 C -0.148 4.148 6 C -0.128 4.128 7 C -0.118 4.118 8 H 0.124 0.876 9 C -0.185 4.185 10 C 0.006 3.994 11 H 0.109 0.891 12 N -0.361 5.361 13 C 0.296 3.704 14 O -0.472 6.472 15 C -0.168 4.168 16 C -0.140 4.140 17 C -0.016 4.016 18 O -0.254 6.254 19 C 0.071 3.929 20 C -0.172 4.172 21 C -0.085 4.085 22 C -0.193 4.193 23 O -0.366 6.366 24 Si 0.698 3.302 25 C -0.178 4.178 26 C -0.090 4.090 27 C -0.224 4.224 28 C -0.169 4.169 29 H 0.145 0.855 30 H 0.079 0.921 31 H 0.079 0.921 32 H 0.140 0.860 33 H 0.144 0.856 34 H 0.086 0.914 35 H 0.085 0.915 36 H 0.110 0.890 37 H 0.084 0.916 38 H 0.255 0.745 39 H 0.146 0.854 40 H 0.144 0.856 41 H 0.077 0.923 42 H 0.078 0.922 43 H 0.100 0.900 44 H 0.103 0.897 45 H 0.133 0.867 46 H 0.119 0.881 47 H 0.245 0.755 48 H -0.228 1.228 49 H -0.208 1.208 50 H 0.165 0.835 51 H 0.177 0.823 52 H 0.171 0.829 53 H 0.097 0.903 54 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -5.467 4.596 0.019 7.142 hybrid contribution -0.702 -0.768 0.170 1.055 sum -6.169 3.828 0.189 7.263 Atomic orbital electron populations 1.23490 0.75219 1.05472 1.02367 1.86518 1.24717 1.33600 1.83738 1.24579 0.93568 0.80806 0.70939 1.90669 1.68369 1.37387 1.47004 1.21567 0.84874 1.00634 1.07702 1.21315 0.94475 0.93704 1.03266 1.22357 0.94078 0.97861 0.97488 0.87620 1.23590 0.98093 0.99294 0.97523 1.22496 0.97298 0.89383 0.90174 0.89074 1.45951 1.17454 1.31350 1.41314 1.21209 0.81314 0.86053 0.81844 1.90730 1.48170 1.41561 1.66717 1.21542 0.97658 0.98957 0.98604 1.21150 0.96822 0.98319 0.97691 1.22996 0.81736 1.00087 0.96805 1.86056 1.35587 1.50468 1.53300 1.19204 0.93851 0.89983 0.89865 1.20321 0.94718 1.02037 1.00133 1.20214 0.96747 0.95099 0.96421 1.25396 0.85436 1.10539 0.97947 1.86471 1.54172 1.44564 1.51347 0.93504 0.76029 0.84170 0.76493 1.21191 0.95415 0.98621 1.02589 1.21316 0.95560 0.98268 0.93837 1.21604 1.01593 0.96576 1.02669 1.23355 0.96835 0.97477 0.99244 0.85531 0.92104 0.92120 0.86011 0.85573 0.91355 0.91466 0.89021 0.91634 0.74496 0.85417 0.85559 0.92335 0.92159 0.89964 0.89687 0.86737 0.88088 0.75464 1.22847 1.20767 0.83452 0.82274 0.82898 0.90276 0.88197 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.16 16 2 O -0.37 -0.89 10.56 -51.39 -0.54 -1.44 16 3 C 0.46 1.25 7.96 71.23 0.57 1.82 16 4 O -0.54 -5.01 15.73 21.95 0.35 -4.67 16 5 C -0.11 0.53 5.80 29.85 0.17 0.70 16 6 C -0.09 0.41 4.34 30.59 0.13 0.54 16 7 C -0.10 0.63 3.65 -10.21 -0.04 0.59 16 8 H 0.11 -0.79 8.13 -2.38 -0.02 -0.80 16 9 C -0.15 0.61 7.44 31.18 0.23 0.84 16 10 C 0.11 -0.27 4.21 45.51 0.19 -0.08 16 11 H 0.09 0.26 7.50 -2.39 -0.02 0.24 16 12 N -0.71 2.94 5.36 -440.05 -2.36 0.58 16 13 C 0.51 0.67 7.83 87.66 0.69 1.36 16 14 O -0.59 -7.30 15.60 -3.05 -0.05 -7.35 16 15 C -0.13 0.81 5.70 29.85 0.17 0.98 16 16 C -0.10 -0.04 4.87 30.59 0.15 0.11 16 17 C 0.06 -0.12 4.74 71.98 0.34 0.22 16 18 O -0.34 -2.19 10.14 -92.47 -0.94 -3.13 16 19 C 0.12 0.60 6.69 22.50 0.15 0.75 16 20 C -0.15 -1.04 9.55 22.37 0.21 -0.83 16 21 C -0.08 -0.23 5.39 -19.88 -0.11 -0.34 16 22 C -0.08 -0.17 2.82 71.24 0.20 0.03 16 23 O -0.56 -1.77 12.76 -148.98 -1.90 -3.67 16 24 Si 0.79 -1.35 29.79 68.60 2.04 0.69 16 25 C -0.16 0.18 8.67 22.28 0.19 0.38 16 26 C -0.07 0.19 10.04 22.25 0.22 0.41 16 27 C -0.21 0.12 9.04 22.37 0.20 0.32 16 28 C -0.13 0.84 7.39 31.12 0.23 1.07 16 29 H 0.13 -0.83 8.14 -2.39 -0.02 -0.85 16 30 H 0.06 -0.04 8.13 -2.39 -0.02 -0.05 16 31 H 0.06 -0.04 8.13 -2.39 -0.02 -0.06 16 32 H 0.12 -0.91 8.14 -2.39 -0.02 -0.93 16 33 H 0.13 -1.05 8.14 -2.39 -0.02 -1.07 16 34 H 0.07 -0.17 8.10 -2.39 -0.02 -0.19 16 35 H 0.07 -0.19 7.81 -2.39 -0.02 -0.21 16 36 H 0.09 -0.47 7.90 -2.38 -0.02 -0.48 16 37 H 0.06 -0.13 8.14 -2.38 -0.02 -0.15 16 38 H 0.42 -4.49 8.71 -92.71 -0.81 -5.29 16 39 H 0.13 -1.52 8.14 -2.39 -0.02 -1.54 16 40 H 0.13 -1.47 8.14 -2.39 -0.02 -1.49 16 41 H 0.06 0.30 8.10 -2.39 -0.02 0.28 16 42 H 0.06 0.30 8.10 -2.39 -0.02 0.28 16 43 H 0.08 -0.48 7.66 -2.39 -0.02 -0.50 16 44 H 0.09 -0.53 7.66 -2.39 -0.02 -0.55 16 45 H 0.11 1.08 8.06 -2.91 -0.02 1.05 16 46 H 0.10 0.40 7.96 -2.39 -0.02 0.38 16 47 H 0.40 -2.10 8.70 -74.05 -0.64 -2.75 16 48 H -0.30 -1.75 7.11 99.48 0.71 -1.04 16 49 H -0.28 -0.60 7.11 99.48 0.71 0.11 16 50 H 0.15 -0.85 4.87 -2.91 -0.01 -0.87 16 51 H 0.16 -1.39 8.06 -2.91 -0.02 -1.41 16 52 H 0.15 -0.94 6.30 -2.91 -0.02 -0.95 16 53 H 0.08 -0.48 8.14 -2.39 -0.02 -0.50 16 54 H 0.10 -0.84 8.07 -2.39 -0.02 -0.86 16 Total: 0.00 -30.33 445.81 1.21 -29.12 By element: Atomic # 1 Polarization: -19.70 SS G_CDS: -0.50 Total: -20.20 kcal Atomic # 6 Polarization: 4.95 SS G_CDS: 5.11 Total: 10.06 kcal Atomic # 7 Polarization: 2.94 SS G_CDS: -2.36 Total: 0.58 kcal Atomic # 8 Polarization: -17.17 SS G_CDS: -3.08 Total: -20.26 kcal Atomic # 14 Polarization: -1.35 SS G_CDS: 2.04 Total: 0.69 kcal Total: -30.33 1.21 -29.12 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_4549616.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -127.013 kcal (2) G-P(sol) polarization free energy of solvation -30.333 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -157.346 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.210 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.123 kcal (6) G-S(sol) free energy of system = (1) + (5) -156.137 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds