Wall clock time and date at job start Tue Mar 9 2021 13:27:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34228 * 117.00246 * 2 1 4 4 O 1.20830 * 119.99719 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00343 * 180.02562 * 3 2 1 6 6 C 1.52992 * 109.47236 * 179.97438 * 5 3 2 7 7 C 1.52997 * 109.47296 * 179.97438 * 6 5 3 8 8 H 1.09006 * 112.84493 * 43.80824 * 7 6 5 9 9 C 1.53778 * 113.61867 * 174.99773 * 7 6 5 10 10 C 1.53783 * 87.08121 * 139.98637 * 9 7 6 11 11 H 1.08994 * 113.61286 * 89.20331 * 10 9 7 12 12 N 1.46507 * 113.61245 * 220.02296 * 10 9 7 13 13 C 1.34775 * 119.99612 * 204.99818 * 12 10 9 14 14 O 1.21282 * 120.00249 * 359.97438 * 13 12 10 15 15 C 1.50697 * 119.99664 * 179.97438 * 13 12 10 16 16 O 1.42902 * 109.47005 * 180.02562 * 15 13 12 17 17 C 1.35903 * 116.99881 * 180.02562 * 16 15 13 18 18 C 1.38713 * 120.05329 * 180.02562 * 17 16 15 19 19 N 1.48006 * 120.03225 * 359.97438 * 18 17 16 20 20 O 1.21796 * 120.00240 * 180.02562 * 19 18 17 21 21 O 1.21807 * 119.99352 * 0.03080 * 19 18 17 22 22 C 1.38166 * 119.94534 * 180.02562 * 18 17 16 23 23 C 1.38248 * 120.05495 * 359.97438 * 22 18 17 24 24 C 1.50699 * 119.94669 * 179.97438 * 23 22 18 25 25 O 1.42907 * 109.46603 * 65.00093 * 24 23 22 26 26 Si 1.86298 * 109.47032 * 184.99397 * 24 23 22 27 27 C 1.38288 * 120.10993 * 0.27060 * 23 22 18 28 28 C 1.38128 * 120.05684 * 359.45324 * 27 23 22 29 29 C 1.53779 * 87.08090 * 334.56778 * 10 9 7 30 30 H 1.09002 * 109.47144 * 180.02562 * 1 2 3 31 31 H 1.09003 * 109.46870 * 300.00285 * 1 2 3 32 32 H 1.09000 * 109.46917 * 60.00429 * 1 2 3 33 33 H 1.08997 * 109.47318 * 59.99346 * 5 3 2 34 34 H 1.09003 * 109.46821 * 299.99644 * 5 3 2 35 35 H 1.09006 * 109.47169 * 59.99906 * 6 5 3 36 36 H 1.09003 * 109.47362 * 299.99848 * 6 5 3 37 37 H 1.09006 * 113.61039 * 25.43733 * 9 7 6 38 38 H 1.09001 * 113.61862 * 254.53309 * 9 7 6 39 39 H 0.97003 * 120.00052 * 25.00045 * 12 10 9 40 40 H 1.09007 * 109.47083 * 60.00407 * 15 13 12 41 41 H 1.08997 * 109.47976 * 299.99973 * 15 13 12 42 42 H 1.08001 * 119.97718 * 180.02562 * 22 18 17 43 43 H 1.08996 * 109.47117 * 305.00006 * 24 23 22 44 44 H 0.96697 * 114.00527 * 59.99993 * 25 24 23 45 45 H 1.48506 * 109.99834 * 58.68765 * 26 24 23 46 46 H 1.48502 * 110.00011 * 180.02562 * 26 24 23 47 47 H 1.07997 * 119.97469 * 179.70984 * 27 23 22 48 48 H 1.08000 * 120.02842 * 180.29335 * 28 27 23 49 49 H 1.09004 * 113.61020 * 139.97568 * 29 10 9 50 50 H 1.08995 * 113.62129 * 270.88450 * 29 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 -0.0006 6 6 4.0002 2.7420 -0.0011 7 6 5.5280 2.8221 -0.0011 8 1 5.9886 2.1200 -0.6962 9 6 6.0698 4.2560 -0.1244 10 6 7.1385 3.8569 0.9069 11 1 8.0409 3.4389 0.4610 12 7 7.4229 4.9033 1.8922 13 6 8.6180 4.9361 2.5143 14 8 9.4579 4.0993 2.2588 15 6 8.9107 6.0127 3.5273 16 8 10.2319 5.8357 4.0423 17 6 10.6558 6.7295 4.9741 18 6 11.9277 6.6174 5.5162 19 7 12.8247 5.5237 5.0808 20 8 13.9412 5.4255 5.5575 21 8 12.4463 4.7218 4.2456 22 6 12.3561 7.5270 6.4638 23 6 11.5186 8.5486 6.8714 24 6 11.9882 9.5391 7.9055 25 8 13.0785 10.2975 7.3780 26 14 10.5889 10.6873 8.3461 27 6 10.2483 8.6595 6.3362 28 6 9.8173 7.7561 5.3844 29 6 6.1465 2.7935 1.4066 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3633 0.5139 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 3.9558 0.7808 -0.8907 34 1 3.9564 0.7806 0.8892 35 1 3.6107 3.2363 0.8889 36 1 3.6101 3.2359 -0.8911 37 1 5.3775 5.0168 0.2363 38 1 6.4774 4.4856 -1.1089 39 1 6.7509 5.5723 2.0968 40 1 8.1907 5.9492 4.3433 41 1 8.8348 6.9902 3.0511 42 1 13.3464 7.4405 6.8859 43 1 12.3149 9.0053 8.7979 44 1 12.8594 10.7994 6.5810 45 1 9.4368 9.9078 8.8662 46 1 11.0393 11.6695 9.3648 47 1 9.5941 9.4557 6.6596 48 1 8.8269 7.8459 4.9632 49 1 6.6159 1.8424 1.6580 50 1 5.4752 3.1544 2.1858 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475074_4549638.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:27:36 Heat of formation + Delta-G solvation = -132.253106 kcal Electronic energy + Delta-G solvation = -35714.247517 eV Core-core repulsion = 30485.493390 eV Total energy + Delta-G solvation = -5228.754127 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.160 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -43.02742 -41.82222 -41.52643 -41.10273 -40.01977 -39.13705 -37.58487 -37.52053 -37.12772 -35.30100 -33.63553 -33.38905 -32.40050 -30.21372 -29.06011 -27.59664 -27.04731 -26.83991 -26.54475 -24.35803 -23.29655 -22.77482 -21.85913 -21.51404 -20.82708 -20.46683 -19.45161 -19.23135 -18.59578 -18.45251 -18.34977 -18.23478 -17.69756 -17.66204 -17.54567 -17.38747 -16.99748 -16.54523 -16.45030 -16.22186 -15.86483 -15.76493 -15.38350 -15.25521 -14.90515 -14.60684 -14.26578 -14.14292 -14.05979 -13.97746 -13.90627 -13.63766 -13.43557 -13.30174 -13.13041 -12.83379 -12.59766 -12.44862 -12.41738 -12.20487 -12.15234 -12.08824 -11.85422 -11.80448 -11.76853 -11.73989 -11.43009 -11.36505 -10.94462 -10.94015 -10.76280 -10.19333 -9.92857 -5.31394 -1.14204 -0.39408 0.37267 0.52536 0.99991 1.08165 1.19326 1.36670 1.38569 1.70624 1.75372 1.91975 2.20805 2.97435 3.01310 3.19203 3.24886 3.30032 3.32048 3.40650 3.51710 3.55460 3.57640 3.60092 3.68467 3.69419 3.71661 3.97880 4.06364 4.12105 4.13568 4.14601 4.21855 4.29717 4.33820 4.41604 4.43092 4.50801 4.54080 4.58670 4.66158 4.66409 4.72762 4.88474 4.91037 4.91499 5.04542 5.18076 5.36254 5.40310 5.45989 5.69791 6.24822 6.32141 6.72425 6.93173 7.01744 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.509 6.509 5 C -0.114 4.114 6 C -0.096 4.096 7 C -0.109 4.109 8 H 0.100 0.900 9 C -0.140 4.140 10 C 0.124 3.876 11 H 0.120 0.880 12 N -0.718 5.718 13 C 0.514 3.486 14 O -0.496 6.496 15 C 0.030 3.970 16 O -0.253 6.253 17 C 0.200 3.800 18 C -0.076 4.076 19 N 0.029 4.971 20 O -0.177 6.177 21 O -0.118 6.118 22 C 0.009 3.991 23 C -0.158 4.158 24 C -0.066 4.066 25 O -0.535 6.535 26 Si 0.690 3.310 27 C -0.023 4.023 28 C -0.209 4.209 29 C -0.150 4.150 30 H 0.103 0.897 31 H 0.063 0.937 32 H 0.064 0.936 33 H 0.108 0.892 34 H 0.107 0.893 35 H 0.074 0.926 36 H 0.076 0.924 37 H 0.089 0.911 38 H 0.079 0.921 39 H 0.402 0.598 40 H 0.101 0.899 41 H 0.102 0.898 42 H 0.164 0.836 43 H 0.121 0.879 44 H 0.381 0.619 45 H -0.254 1.254 46 H -0.248 1.248 47 H 0.149 0.851 48 H 0.157 0.843 49 H 0.076 0.924 50 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.509 5.429 -1.135 10.157 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.278 6.278 3 C 0.301 3.699 4 O -0.396 6.396 5 C -0.152 4.152 6 C -0.134 4.134 7 C -0.127 4.127 8 H 0.118 0.882 9 C -0.178 4.178 10 C 0.020 3.980 11 H 0.137 0.863 12 N -0.371 5.371 13 C 0.298 3.702 14 O -0.368 6.368 15 C -0.049 4.049 16 O -0.162 6.162 17 C 0.150 3.850 18 C -0.160 4.160 19 N 0.549 4.451 20 O -0.386 6.386 21 O -0.342 6.342 22 C -0.009 4.009 23 C -0.159 4.159 24 C -0.176 4.176 25 O -0.341 6.341 26 Si 0.591 3.409 27 C -0.041 4.041 28 C -0.229 4.229 29 C -0.189 4.189 30 H 0.121 0.879 31 H 0.082 0.918 32 H 0.082 0.918 33 H 0.126 0.874 34 H 0.125 0.875 35 H 0.093 0.907 36 H 0.095 0.905 37 H 0.107 0.893 38 H 0.098 0.902 39 H 0.237 0.763 40 H 0.119 0.881 41 H 0.120 0.880 42 H 0.181 0.819 43 H 0.138 0.862 44 H 0.228 0.772 45 H -0.179 1.179 46 H -0.172 1.172 47 H 0.166 0.834 48 H 0.174 0.826 49 H 0.095 0.905 50 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -8.595 5.503 -0.013 10.206 hybrid contribution -0.303 -0.357 0.166 0.497 sum -8.898 5.146 0.153 10.280 Atomic orbital electron populations 1.23306 0.75955 1.03978 1.02665 1.86515 1.23783 1.33538 1.83972 1.23919 0.92420 0.81342 0.72174 1.90688 1.67390 1.36372 1.45198 1.21445 0.87203 1.00310 1.06216 1.21393 0.94164 0.93805 1.04016 1.22386 0.94803 0.97598 0.97955 0.88177 1.23410 0.97399 0.97277 0.99742 1.22594 0.98074 0.88287 0.89068 0.86257 1.45805 1.15748 1.32573 1.42986 1.19853 0.82649 0.85795 0.81945 1.90864 1.45389 1.38403 1.62153 1.22758 0.83920 1.00115 0.98085 1.86508 1.31015 1.47394 1.51329 1.18697 0.90565 0.88462 0.87237 1.20592 0.90864 0.96896 1.07668 1.43338 1.00985 1.01066 0.99756 1.94556 1.05533 1.79791 1.58686 1.94700 1.79179 1.35656 1.24635 1.20845 1.00944 0.88928 0.90226 1.20313 0.94538 0.98901 1.02189 1.25097 0.99566 0.96200 0.96740 1.86567 1.35798 1.63957 1.47736 0.94969 0.76574 0.81667 0.87735 1.21246 0.94458 0.96435 0.91967 1.21276 1.01495 0.96842 1.03241 1.23608 0.98262 1.00068 0.96952 0.87884 0.91804 0.91759 0.87389 0.87451 0.90749 0.90527 0.89251 0.90237 0.76342 0.88089 0.87971 0.81860 0.86205 0.77153 1.17868 1.17244 0.83385 0.82567 0.90508 0.89469 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.34 10.57 -39.25 -0.41 -0.75 16 3 C 0.46 0.42 7.96 36.00 0.29 0.71 16 4 O -0.51 -1.94 15.73 -18.75 -0.30 -2.24 16 5 C -0.11 0.29 5.80 -27.89 -0.16 0.13 16 6 C -0.10 0.26 4.34 -26.74 -0.12 0.14 16 7 C -0.11 0.40 3.65 -89.81 -0.33 0.07 16 8 H 0.10 -0.40 8.13 -51.93 -0.42 -0.82 16 9 C -0.14 0.54 7.39 -25.92 -0.19 0.35 16 10 C 0.12 -0.28 4.24 -67.11 -0.28 -0.57 16 11 H 0.12 -0.02 7.46 -51.93 -0.39 -0.41 16 12 N -0.72 2.20 5.35 -53.02 -0.28 1.91 16 13 C 0.51 0.08 7.91 -10.99 -0.09 0.00 16 14 O -0.50 -2.87 16.10 -14.36 -0.23 -3.11 16 15 C 0.03 -0.08 5.22 36.00 0.19 0.10 16 16 O -0.25 -0.49 7.68 -49.79 -0.38 -0.88 16 17 C 0.20 0.10 6.67 -39.22 -0.26 -0.16 16 18 C -0.08 -0.20 6.87 -79.80 -0.55 -0.75 16 19 N 0.03 0.18 4.45 34.03 0.15 0.34 16 20 O -0.18 -1.28 18.45 -29.46 -0.54 -1.82 16 21 O -0.12 -1.00 17.24 -36.49 -0.63 -1.63 16 22 C 0.01 0.00 9.19 -39.60 -0.36 -0.36 16 23 C -0.16 0.35 5.35 -104.60 -0.56 -0.21 16 24 C -0.07 0.17 2.80 36.01 0.10 0.27 16 25 O -0.54 0.90 12.83 -35.23 -0.45 0.44 16 26 Si 0.69 -2.63 29.80 -169.99 -5.06 -7.70 16 27 C -0.02 0.10 8.66 -39.60 -0.34 -0.25 16 28 C -0.21 0.75 9.04 -39.43 -0.36 0.39 16 29 C -0.15 0.44 7.43 -25.92 -0.19 0.24 16 30 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 31 H 0.06 -0.05 8.13 -51.93 -0.42 -0.48 16 32 H 0.06 -0.05 8.13 -51.93 -0.42 -0.48 16 33 H 0.11 -0.42 8.14 -51.93 -0.42 -0.85 16 34 H 0.11 -0.39 8.14 -51.93 -0.42 -0.82 16 35 H 0.07 -0.15 7.80 -51.93 -0.41 -0.55 16 36 H 0.08 -0.13 8.10 -51.93 -0.42 -0.56 16 37 H 0.09 -0.41 8.08 -51.93 -0.42 -0.83 16 38 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 39 H 0.40 -2.57 8.73 -40.82 -0.36 -2.93 16 40 H 0.10 -0.60 7.66 -51.93 -0.40 -1.00 16 41 H 0.10 -0.63 7.66 -51.93 -0.40 -1.03 16 42 H 0.16 0.08 7.61 -52.49 -0.40 -0.32 16 43 H 0.12 -0.25 7.96 -51.93 -0.41 -0.67 16 44 H 0.38 -2.18 8.70 45.56 0.40 -1.78 16 45 H -0.25 0.46 7.11 56.52 0.40 0.86 16 46 H -0.25 0.01 7.11 56.52 0.40 0.41 16 47 H 0.15 -1.04 4.90 -52.49 -0.26 -1.29 16 48 H 0.16 -1.13 6.30 -52.49 -0.33 -1.46 16 49 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 50 H 0.09 -0.28 7.89 -51.93 -0.41 -0.69 16 LS Contribution 429.45 15.07 6.47 6.47 Total: 0.00 -14.94 429.45 -10.60 -25.54 By element: Atomic # 1 Polarization: -10.95 SS G_CDS: -6.78 Total: -17.72 kcal Atomic # 6 Polarization: 3.29 SS G_CDS: -2.15 Total: 1.14 kcal Atomic # 7 Polarization: 2.38 SS G_CDS: -0.13 Total: 2.25 kcal Atomic # 8 Polarization: -7.03 SS G_CDS: -2.95 Total: -9.98 kcal Atomic # 14 Polarization: -2.63 SS G_CDS: -5.06 Total: -7.70 kcal Total LS contribution 6.47 Total: 6.47 kcal Total: -14.94 -10.60 -25.54 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_4549638.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.709 kcal (2) G-P(sol) polarization free energy of solvation -14.942 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.651 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.602 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.544 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.253 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds