Wall clock time and date at job start Tue Mar 9 2021 13:27:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34236 * 116.99821 * 2 1 4 4 O 1.20823 * 119.99925 * 359.97438 * 3 2 1 5 5 C 1.50702 * 119.99793 * 179.97438 * 3 2 1 6 6 C 1.53003 * 109.46934 * 179.97438 * 5 3 2 7 7 C 1.52995 * 109.46756 * 179.97438 * 6 5 3 8 8 H 1.08997 * 112.85305 * 43.80576 * 7 6 5 9 9 C 1.53791 * 113.61020 * 175.00092 * 7 6 5 10 10 C 1.53786 * 87.07966 * 140.06341 * 9 7 6 11 11 H 1.08998 * 113.60870 * 89.19954 * 10 9 7 12 12 N 1.46499 * 113.61394 * 220.01815 * 10 9 7 13 13 C 1.34777 * 119.99665 * 205.27970 * 12 10 9 14 14 O 1.21283 * 119.99990 * 359.71991 * 13 12 10 15 15 C 1.50698 * 119.99538 * 179.72653 * 13 12 10 16 16 O 1.42908 * 109.46887 * 180.02562 * 15 13 12 17 17 C 1.35899 * 116.99727 * 179.97438 * 16 15 13 18 18 C 1.38713 * 120.05409 * 179.72351 * 17 16 15 19 19 C 1.38164 * 119.94517 * 179.76933 * 18 17 16 20 20 C 1.50703 * 119.97354 * 180.22972 * 19 18 17 21 21 O 1.42899 * 109.46708 * 65.25338 * 20 19 18 22 22 Si 1.86300 * 109.47135 * 185.25015 * 20 19 18 23 23 C 1.38245 * 120.05493 * 0.48032 * 19 18 17 24 24 C 1.38290 * 120.11182 * 359.77574 * 23 19 18 25 25 C 1.38123 * 120.05289 * 359.97438 * 24 23 19 26 26 C 1.53778 * 87.08287 * 334.56878 * 10 9 7 27 27 H 1.08991 * 109.47346 * 300.00730 * 1 2 3 28 28 H 1.09003 * 109.46771 * 60.00853 * 1 2 3 29 29 H 1.08998 * 109.46730 * 179.97438 * 1 2 3 30 30 H 1.09002 * 109.47082 * 59.99770 * 5 3 2 31 31 H 1.09002 * 109.47046 * 299.99762 * 5 3 2 32 32 H 1.08997 * 109.46845 * 59.99772 * 6 5 3 33 33 H 1.09000 * 109.46740 * 300.00308 * 6 5 3 34 34 H 1.08999 * 113.61698 * 25.51694 * 9 7 6 35 35 H 1.09001 * 113.60977 * 254.61150 * 9 7 6 36 36 H 0.97001 * 119.99790 * 24.99683 * 12 10 9 37 37 H 1.09003 * 109.47112 * 299.99065 * 15 13 12 38 38 H 1.08993 * 109.47916 * 59.99687 * 15 13 12 39 39 H 1.08005 * 120.02869 * 359.97438 * 18 17 16 40 40 H 1.08990 * 109.47054 * 305.25365 * 20 19 18 41 41 H 0.96705 * 114.00138 * 180.02562 * 21 20 19 42 42 H 1.48501 * 109.99858 * 300.00148 * 22 20 19 43 43 H 1.48501 * 109.99860 * 61.32331 * 22 20 19 44 44 H 1.08000 * 119.94361 * 179.74922 * 23 19 18 45 45 H 1.07998 * 119.97451 * 179.97438 * 24 23 19 46 46 H 1.08004 * 120.02392 * 179.97438 * 25 24 23 47 47 H 1.08997 * 113.61721 * 139.97826 * 26 10 9 48 48 H 1.09004 * 113.61436 * 270.88721 * 26 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0001 2.7422 -0.0002 7 6 5.5280 2.8222 0.0011 8 1 5.9892 2.1199 -0.6933 9 6 6.0698 4.2562 -0.1224 10 6 7.1389 3.8570 0.9084 11 1 8.0411 3.4389 0.4619 12 7 7.4239 4.9031 1.8935 13 6 8.6214 4.9391 2.5109 14 8 9.4612 4.1025 2.2546 15 6 8.9167 6.0189 3.5198 16 8 10.2402 5.8449 4.0301 17 6 10.6669 6.7425 4.9570 18 6 11.9388 6.6298 5.4991 19 6 12.3721 7.5464 6.4377 20 6 13.7557 7.4276 7.0232 21 8 14.7270 7.6414 5.9971 22 14 13.9752 8.7045 8.3619 23 6 11.5357 8.5693 6.8441 24 6 10.2653 8.6807 6.3092 25 6 9.8293 7.7699 5.3667 26 6 6.1471 2.7935 1.4085 27 1 -0.3633 0.5139 0.8898 28 1 -0.3633 0.5137 -0.8901 29 1 -0.3633 -1.0277 -0.0005 30 1 3.9564 0.7806 -0.8891 31 1 3.9557 0.7810 0.8909 32 1 3.6099 3.2368 0.8893 33 1 3.6107 3.2357 -0.8907 34 1 5.3778 5.0170 0.2387 35 1 6.4768 4.4858 -1.1071 36 1 6.7522 5.5722 2.0985 37 1 8.8379 6.9950 3.0409 38 1 8.2001 5.9571 4.3387 39 1 12.5910 5.8282 5.1852 40 1 13.8870 6.4317 7.4460 41 1 15.6423 7.5793 6.3029 42 1 13.7985 10.0670 7.7981 43 1 12.9915 8.4737 9.4502 44 1 11.8748 9.2824 7.5809 45 1 9.6136 9.4805 6.6285 46 1 8.8369 7.8571 4.9495 47 1 6.6165 1.8424 1.6595 48 1 5.4762 3.1544 2.1880 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14475074_4860298.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:27:51 Heat of formation + Delta-G solvation = -138.913682 kcal Electronic energy + Delta-G solvation = -29072.747828 eV Core-core repulsion = 24674.721312 eV Total energy + Delta-G solvation = -4398.026516 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -41.73359 -41.53427 -40.98488 -39.72110 -38.80947 -37.64440 -37.30884 -35.27998 -33.44622 -32.70427 -31.78366 -29.66516 -28.90062 -26.97095 -26.72616 -26.46072 -23.84079 -23.60420 -22.34862 -21.67905 -21.47260 -20.58718 -19.23796 -18.62492 -18.44084 -18.25000 -17.71505 -17.69068 -17.52927 -17.49964 -17.23043 -16.71695 -16.25883 -15.88355 -15.77826 -15.44700 -15.28364 -14.89664 -14.64308 -14.55319 -14.36041 -14.16923 -13.87698 -13.82426 -13.74046 -13.40453 -13.35890 -13.26042 -13.04550 -12.72137 -12.45411 -12.33771 -12.25457 -12.17172 -11.93654 -11.85471 -11.82729 -11.70899 -11.40559 -11.20781 -10.98161 -10.39823 -10.13529 -10.02076 -9.43811 -4.93182 0.05784 0.21564 1.14243 1.25293 1.37390 1.45531 1.65596 1.77541 1.96109 2.48850 2.54650 3.38027 3.45493 3.51010 3.52718 3.69839 3.73965 3.79361 3.82198 3.84604 3.85308 3.95058 4.02489 4.13615 4.15265 4.18066 4.23872 4.25106 4.29545 4.37886 4.51396 4.55588 4.63870 4.67325 4.69137 4.78098 4.83607 4.87211 4.93292 5.05941 5.06815 5.08046 5.17870 5.22872 5.28389 5.32054 5.40759 5.51067 5.59917 6.16650 6.42194 6.68080 6.87388 7.08024 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.369 6.369 3 C 0.456 3.544 4 O -0.544 6.544 5 C -0.111 4.111 6 C -0.090 4.090 7 C -0.098 4.098 8 H 0.107 0.893 9 C -0.131 4.131 10 C 0.113 3.887 11 H 0.094 0.906 12 N -0.699 5.699 13 C 0.513 3.487 14 O -0.573 6.573 15 C 0.035 3.965 16 O -0.318 6.318 17 C 0.120 3.880 18 C -0.144 4.144 19 C -0.052 4.052 20 C -0.090 4.090 21 O -0.565 6.565 22 Si 0.788 3.212 23 C -0.181 4.181 24 C -0.072 4.072 25 C -0.202 4.202 26 C -0.146 4.146 27 H 0.060 0.940 28 H 0.060 0.940 29 H 0.127 0.873 30 H 0.126 0.874 31 H 0.123 0.877 32 H 0.067 0.933 33 H 0.068 0.932 34 H 0.102 0.898 35 H 0.080 0.920 36 H 0.421 0.579 37 H 0.124 0.876 38 H 0.126 0.874 39 H 0.124 0.876 40 H 0.090 0.910 41 H 0.404 0.596 42 H -0.292 1.292 43 H -0.285 1.285 44 H 0.123 0.877 45 H 0.159 0.841 46 H 0.166 0.834 47 H 0.067 0.933 48 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.407 0.796 1.941 3.192 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.286 6.286 3 C 0.301 3.699 4 O -0.434 6.434 5 C -0.148 4.148 6 C -0.128 4.128 7 C -0.117 4.117 8 H 0.125 0.875 9 C -0.169 4.169 10 C 0.008 3.992 11 H 0.112 0.888 12 N -0.352 5.352 13 C 0.299 3.701 14 O -0.452 6.452 15 C -0.043 4.043 16 O -0.231 6.231 17 C 0.075 3.925 18 C -0.163 4.163 19 C -0.052 4.052 20 C -0.199 4.199 21 O -0.376 6.376 22 Si 0.692 3.308 23 C -0.198 4.198 24 C -0.090 4.090 25 C -0.220 4.220 26 C -0.185 4.185 27 H 0.079 0.921 28 H 0.079 0.921 29 H 0.145 0.855 30 H 0.144 0.856 31 H 0.141 0.859 32 H 0.086 0.914 33 H 0.087 0.913 34 H 0.120 0.880 35 H 0.098 0.902 36 H 0.259 0.741 37 H 0.142 0.858 38 H 0.144 0.856 39 H 0.143 0.857 40 H 0.108 0.892 41 H 0.255 0.745 42 H -0.220 1.220 43 H -0.212 1.212 44 H 0.140 0.860 45 H 0.176 0.824 46 H 0.184 0.816 47 H 0.086 0.914 48 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -2.830 1.020 1.753 3.481 hybrid contribution -1.026 -0.011 -0.333 1.079 sum -3.856 1.008 1.420 4.231 Atomic orbital electron populations 1.23487 0.75236 1.05475 1.02349 1.86521 1.24703 1.33612 1.83745 1.24593 0.93592 0.80798 0.70935 1.90668 1.68379 1.37389 1.47003 1.21572 0.84836 1.00631 1.07741 1.21316 0.94410 0.93727 1.03326 1.22318 0.94136 0.97790 0.97465 0.87483 1.23390 0.96679 0.97640 0.99189 1.22598 0.97605 0.89078 0.89921 0.88762 1.45728 1.15141 1.32457 1.41906 1.20518 0.82372 0.85421 0.81742 1.90758 1.47892 1.41632 1.64896 1.22787 0.84004 0.99435 0.98076 1.86132 1.32274 1.50274 1.54404 1.19182 0.93888 0.89717 0.89715 1.20354 0.94548 1.01972 0.99453 1.19490 0.95249 0.94329 0.96115 1.25045 0.86571 1.09962 0.98336 1.86454 1.19643 1.94987 1.36466 0.94229 0.87733 0.74248 0.74550 1.21053 0.96425 0.99026 1.03324 1.21249 0.95028 0.98373 0.94312 1.21614 1.01768 0.96356 1.02271 1.23583 0.97940 0.99255 0.97673 0.92136 0.92125 0.85522 0.85563 0.85946 0.91393 0.91334 0.88000 0.90153 0.74146 0.85830 0.85644 0.85748 0.89207 0.74496 1.21969 1.21220 0.86013 0.82362 0.81621 0.91379 0.88758 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.16 16 2 O -0.37 -0.86 10.57 -51.47 -0.54 -1.41 16 3 C 0.46 1.19 7.96 71.24 0.57 1.75 16 4 O -0.54 -4.95 15.73 21.97 0.35 -4.60 16 5 C -0.11 0.56 5.80 29.85 0.17 0.74 16 6 C -0.09 0.44 4.34 30.59 0.13 0.58 16 7 C -0.10 0.67 3.65 -10.26 -0.04 0.63 16 8 H 0.11 -0.85 8.13 -2.39 -0.02 -0.87 16 9 C -0.13 0.88 7.39 31.13 0.23 1.11 16 10 C 0.11 -0.28 4.24 45.52 0.19 -0.09 16 11 H 0.09 0.27 7.46 -2.39 -0.02 0.25 16 12 N -0.70 2.56 5.35 -440.04 -2.36 0.20 16 13 C 0.51 2.01 7.91 87.66 0.69 2.70 16 14 O -0.57 -8.96 16.10 16.00 0.26 -8.70 16 15 C 0.03 -0.04 5.22 71.24 0.37 0.33 16 16 O -0.32 -2.79 9.67 -73.37 -0.71 -3.50 16 17 C 0.12 0.89 6.69 22.51 0.15 1.04 16 18 C -0.14 -1.42 9.63 22.37 0.22 -1.20 16 19 C -0.05 -0.40 5.38 -19.88 -0.11 -0.50 16 20 C -0.09 -0.20 2.79 71.24 0.20 -0.01 16 21 O -0.57 -1.68 12.81 -148.98 -1.91 -3.58 16 22 Si 0.79 -0.95 29.85 68.60 2.05 1.10 16 23 C -0.18 -1.06 8.67 22.28 0.19 -0.87 16 24 C -0.07 -0.14 10.04 22.25 0.22 0.09 16 25 C -0.20 -0.26 9.04 22.36 0.20 -0.06 16 26 C -0.15 0.68 7.43 31.12 0.23 0.91 16 27 H 0.06 -0.04 8.13 -2.39 -0.02 -0.06 16 28 H 0.06 -0.03 8.13 -2.39 -0.02 -0.05 16 29 H 0.13 -0.83 8.14 -2.39 -0.02 -0.85 16 30 H 0.13 -1.08 8.14 -2.39 -0.02 -1.10 16 31 H 0.12 -0.96 8.14 -2.39 -0.02 -0.98 16 32 H 0.07 -0.22 7.81 -2.39 -0.02 -0.24 16 33 H 0.07 -0.19 8.10 -2.39 -0.02 -0.21 16 34 H 0.10 -0.91 8.08 -2.39 -0.02 -0.93 16 35 H 0.08 -0.51 8.14 -2.39 -0.02 -0.53 16 36 H 0.42 -4.63 8.73 -92.71 -0.81 -5.44 16 37 H 0.12 -0.91 7.66 -2.39 -0.02 -0.93 16 38 H 0.13 -0.98 7.66 -2.39 -0.02 -1.00 16 39 H 0.12 1.36 8.06 -2.91 -0.02 1.34 16 40 H 0.09 -0.10 7.96 -2.39 -0.02 -0.12 16 41 H 0.40 -3.29 8.74 -74.05 -0.65 -3.94 16 42 H -0.29 -1.62 7.05 99.48 0.70 -0.92 16 43 H -0.29 -1.03 7.11 99.48 0.71 -0.33 16 44 H 0.12 0.56 4.86 -2.91 -0.01 0.54 16 45 H 0.16 -0.67 8.06 -2.91 -0.02 -0.70 16 46 H 0.17 -1.10 6.30 -2.91 -0.02 -1.12 16 47 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 48 H 0.09 -0.55 7.90 -2.39 -0.02 -0.57 16 Total: 0.00 -32.64 403.44 1.53 -31.12 By element: Atomic # 1 Polarization: -18.50 SS G_CDS: -0.43 Total: -18.93 kcal Atomic # 6 Polarization: 3.49 SS G_CDS: 4.83 Total: 8.32 kcal Atomic # 7 Polarization: 2.56 SS G_CDS: -2.36 Total: 0.20 kcal Atomic # 8 Polarization: -19.24 SS G_CDS: -2.56 Total: -21.80 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: 2.05 Total: 1.10 kcal Total: -32.64 1.53 -31.12 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_4860298.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.797 kcal (2) G-P(sol) polarization free energy of solvation -32.644 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.441 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.528 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.117 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.914 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds