Wall clock time and date at job start Tue Mar 9 2021 13:30:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34223 * 117.00192 * 2 1 4 4 O 1.20827 * 120.00059 * 359.97438 * 3 2 1 5 5 C 1.50703 * 120.00347 * 179.97438 * 3 2 1 6 6 H 1.09002 * 109.47194 * 300.00481 * 5 3 2 7 7 C 1.53004 * 109.46989 * 59.99736 * 5 3 2 8 8 C 1.52993 * 109.47068 * 179.97438 * 7 5 3 9 9 C 1.52998 * 109.47655 * 300.00448 * 8 7 5 10 10 H 1.09001 * 109.46794 * 299.99886 * 9 8 7 11 11 N 1.46504 * 109.47237 * 179.97438 * 9 8 7 12 12 C 1.34771 * 119.99941 * 84.99980 * 11 9 8 13 13 O 1.21589 * 119.99818 * 359.97438 * 12 11 9 14 14 C 1.47541 * 119.99780 * 180.02562 * 12 11 9 15 15 C 1.40136 * 120.18807 * 179.97438 * 14 12 11 16 16 O 1.35651 * 120.15540 * 359.97438 * 15 14 12 17 17 C 1.42899 * 117.00666 * 179.97438 * 16 15 14 18 18 C 1.38707 * 119.69723 * 180.02562 * 15 14 12 19 19 C 1.38056 * 120.08529 * 359.74292 * 18 15 14 20 20 C 1.38550 * 120.38681 * 0.51809 * 19 18 15 21 21 C 1.50698 * 119.84608 * 179.76250 * 20 19 18 22 22 O 1.42905 * 109.47321 * 119.72092 * 21 20 19 23 23 Si 1.86295 * 109.47516 * 359.71982 * 21 20 19 24 24 C 1.37783 * 120.30088 * 359.47922 * 20 19 18 25 25 C 1.53001 * 109.46764 * 59.99853 * 9 8 7 26 26 C 1.52992 * 109.47295 * 299.99914 * 25 9 8 27 27 H 1.08993 * 109.47104 * 300.00050 * 1 2 3 28 28 H 1.09000 * 109.46616 * 60.00071 * 1 2 3 29 29 H 1.08995 * 109.46864 * 179.97438 * 1 2 3 30 30 H 1.08995 * 109.46993 * 300.00450 * 7 5 3 31 31 H 1.09002 * 109.46544 * 60.00347 * 7 5 3 32 32 H 1.08996 * 109.47120 * 179.97438 * 8 7 5 33 33 H 1.09002 * 109.47037 * 60.00793 * 8 7 5 34 34 H 0.97005 * 119.99752 * 265.00153 * 11 9 8 35 35 H 1.09000 * 109.46919 * 300.00095 * 17 16 15 36 36 H 1.09004 * 109.46456 * 59.99628 * 17 16 15 37 37 H 1.08997 * 109.47146 * 179.97438 * 17 16 15 38 38 H 1.08004 * 119.95769 * 179.97438 * 18 15 14 39 39 H 1.08002 * 119.80705 * 180.27437 * 19 18 15 40 40 H 1.09001 * 109.47122 * 239.72192 * 21 20 19 41 41 H 0.96696 * 114.00036 * 299.99741 * 22 21 20 42 42 H 1.48496 * 110.00262 * 180.02562 * 23 21 20 43 43 H 1.48497 * 109.99780 * 301.32070 * 23 21 20 44 44 H 1.08001 * 120.04600 * 180.23462 * 24 20 19 45 45 H 1.09001 * 109.47438 * 60.00428 * 25 9 8 46 46 H 1.09003 * 109.46845 * 180.02562 * 25 9 8 47 47 H 1.09001 * 109.47358 * 180.02562 * 26 25 9 48 48 H 1.09001 * 109.47297 * 300.00600 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 0.0006 6 1 3.9558 0.7808 0.8908 7 6 4.1140 0.5809 -1.2483 8 6 5.6418 0.6616 -1.2481 9 6 6.0751 2.1289 -1.2485 10 1 5.6854 2.6226 -2.1387 11 7 7.5381 2.2060 -1.2476 12 6 8.2171 2.1394 -2.4099 13 8 7.6155 2.0148 -3.4591 14 6 9.6905 2.2165 -2.4089 15 6 10.4006 2.1471 -3.6151 16 8 9.7365 2.0081 -4.7897 17 6 10.5269 1.9450 -5.9785 18 6 11.7856 2.2201 -3.6023 19 6 12.4600 2.3658 -2.4065 20 6 11.7618 2.4295 -1.2114 21 6 12.5106 2.5833 0.0873 22 8 12.1034 3.7921 0.7316 23 14 14.3407 2.6480 -0.2548 24 6 10.3858 2.3586 -1.2056 25 6 5.5276 2.8227 0.0005 26 6 3.9998 2.7421 0.0002 27 1 -0.3633 0.5138 0.8899 28 1 -0.3632 0.5138 -0.8900 29 1 -0.3633 -1.0276 -0.0005 30 1 3.8049 -0.4643 -1.2482 31 1 3.7246 1.0749 -2.1385 32 1 6.0319 0.1669 -2.1375 33 1 6.0315 0.1679 -0.3578 34 1 8.0181 2.3051 -0.4104 35 1 11.1081 2.8618 -6.0774 36 1 11.2021 1.0912 -5.9209 37 1 9.8736 1.8334 -6.8438 38 1 12.3371 2.1666 -4.5294 39 1 13.5383 2.4266 -2.4022 40 1 12.2919 1.7346 0.7354 41 1 12.2683 4.5901 0.2111 42 1 15.0903 2.7989 1.0182 43 1 14.7709 1.4101 -0.9533 44 1 9.8456 2.4124 -0.2720 45 1 5.9173 2.3290 0.8907 46 1 5.8359 3.8682 0.0000 47 1 3.6097 3.2368 0.8897 48 1 3.6101 3.2358 -0.8901 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475160_12496546.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:30:42 Heat of formation + Delta-G solvation = -164.452553 kcal Electronic energy + Delta-G solvation = -31244.238545 eV Core-core repulsion = 26845.104581 eV Total energy + Delta-G solvation = -4399.133964 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.85935 -41.58786 -40.35939 -39.22167 -38.78652 -37.35538 -37.17064 -35.20919 -32.93698 -31.94385 -31.87747 -30.85915 -28.69057 -28.43060 -26.22804 -25.62096 -24.27577 -23.85694 -22.65885 -21.78169 -21.38533 -20.79081 -19.50536 -18.53001 -18.40780 -18.07067 -17.76828 -17.43794 -17.24952 -16.84472 -16.69171 -16.26172 -15.96126 -15.91181 -15.83725 -15.32511 -15.15341 -14.90082 -14.78184 -14.59042 -14.42683 -14.17182 -13.88212 -13.73996 -13.67571 -13.41481 -13.29671 -13.19500 -13.00002 -12.61072 -12.46749 -12.36364 -12.24223 -12.15903 -12.11424 -11.83648 -11.74115 -11.59964 -11.40285 -11.23676 -10.80138 -10.44185 -10.24131 -9.95315 -9.28464 -5.12785 -0.25781 0.18122 1.20411 1.25243 1.53649 1.74530 1.87172 1.90552 2.15398 2.21435 2.73478 3.34358 3.46627 3.48713 3.54108 3.59449 3.65087 3.70347 3.90137 3.96432 4.05350 4.05981 4.17295 4.18627 4.19050 4.21347 4.26882 4.28119 4.31650 4.33486 4.38282 4.45615 4.56111 4.59984 4.63756 4.63928 4.72782 4.86173 4.93621 4.97330 5.04479 5.07063 5.08967 5.21877 5.22776 5.28858 5.45337 5.48287 5.56525 6.27910 6.48272 6.58080 6.79504 7.36838 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.464 3.536 4 O -0.505 6.505 5 C -0.081 4.081 6 H 0.111 0.889 7 C -0.108 4.108 8 C -0.128 4.128 9 C 0.144 3.856 10 H 0.092 0.908 11 N -0.728 5.728 12 C 0.562 3.438 13 O -0.514 6.514 14 C -0.175 4.175 15 C 0.192 3.808 16 O -0.279 6.279 17 C 0.019 3.981 18 C -0.214 4.214 19 C -0.048 4.048 20 C -0.169 4.169 21 C -0.062 4.062 22 O -0.541 6.541 23 Si 0.686 3.314 24 C -0.020 4.020 25 C -0.126 4.126 26 C -0.101 4.101 27 H 0.063 0.937 28 H 0.064 0.936 29 H 0.103 0.897 30 H 0.082 0.918 31 H 0.072 0.928 32 H 0.076 0.924 33 H 0.069 0.931 34 H 0.398 0.602 35 H 0.059 0.941 36 H 0.058 0.942 37 H 0.105 0.895 38 H 0.141 0.859 39 H 0.133 0.867 40 H 0.115 0.885 41 H 0.380 0.620 42 H -0.254 1.254 43 H -0.258 1.258 44 H 0.136 0.864 45 H 0.073 0.927 46 H 0.079 0.921 47 H 0.079 0.921 48 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.357 -0.044 0.158 4.360 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.392 6.392 5 C -0.100 4.100 6 H 0.129 0.871 7 C -0.146 4.146 8 C -0.166 4.166 9 C 0.040 3.960 10 H 0.110 0.890 11 N -0.380 5.380 12 C 0.350 3.650 13 O -0.390 6.390 14 C -0.178 4.178 15 C 0.144 3.856 16 O -0.189 6.189 17 C -0.076 4.076 18 C -0.233 4.233 19 C -0.066 4.066 20 C -0.170 4.170 21 C -0.173 4.173 22 O -0.346 6.346 23 Si 0.588 3.412 24 C -0.038 4.038 25 C -0.164 4.164 26 C -0.139 4.139 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.121 0.879 30 H 0.100 0.900 31 H 0.091 0.909 32 H 0.095 0.905 33 H 0.088 0.912 34 H 0.233 0.767 35 H 0.077 0.923 36 H 0.076 0.924 37 H 0.123 0.877 38 H 0.158 0.842 39 H 0.151 0.849 40 H 0.132 0.868 41 H 0.227 0.773 42 H -0.178 1.178 43 H -0.183 1.183 44 H 0.153 0.847 45 H 0.091 0.909 46 H 0.097 0.903 47 H 0.098 0.902 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 4.067 -0.648 -0.071 4.119 hybrid contribution -0.216 -0.333 0.427 0.583 sum 3.851 -0.981 0.356 3.990 Atomic orbital electron populations 1.23308 0.76024 1.03939 1.02690 1.86506 1.23661 1.33410 1.83910 1.23812 0.92038 0.81387 0.72135 1.90689 1.67208 1.36373 1.44933 1.21181 0.86913 0.99571 1.02312 0.87071 1.21495 0.95548 1.01519 0.96043 1.21924 0.94776 0.96586 1.03336 1.21030 0.79131 0.96109 0.99718 0.88961 1.45963 1.07247 1.75824 1.08988 1.17944 0.86538 0.76698 0.83867 1.90848 1.69580 1.47743 1.30834 1.19352 0.93336 1.13445 0.91713 1.19097 0.90149 0.90450 0.85945 1.86382 1.34670 1.85429 1.12439 1.23236 0.97147 1.01419 0.85828 1.21235 0.92647 1.09539 0.99843 1.20994 0.99481 0.94600 0.91489 1.20121 0.94306 1.07175 0.95378 1.24953 1.09279 0.90116 0.92929 1.86499 1.86590 1.15321 1.46201 0.94782 0.74962 0.87967 0.83498 1.20961 0.93554 0.93070 0.96258 1.21819 0.95344 1.01718 0.97478 1.21390 0.94626 0.93389 1.04454 0.91788 0.91766 0.87901 0.89965 0.90893 0.90502 0.91236 0.76661 0.92251 0.92369 0.87671 0.84154 0.84925 0.86806 0.77266 1.17848 1.18264 0.84666 0.90882 0.90271 0.90188 0.90399 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.65 10.47 -39.24 -0.41 -1.06 16 3 C 0.46 1.07 7.26 36.01 0.26 1.33 16 4 O -0.50 -2.62 15.73 -18.75 -0.29 -2.92 16 5 C -0.08 0.04 2.63 -91.77 -0.24 -0.20 16 6 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 7 C -0.11 0.06 5.14 -26.73 -0.14 -0.08 16 8 C -0.13 0.05 5.49 -26.74 -0.15 -0.10 16 9 C 0.14 -0.02 2.45 -67.93 -0.17 -0.18 16 10 H 0.09 0.19 7.58 -51.93 -0.39 -0.21 16 11 N -0.73 0.00 5.03 -54.84 -0.28 -0.27 16 12 C 0.56 1.80 7.73 -12.47 -0.10 1.70 16 13 O -0.51 -3.59 14.82 -16.59 -0.25 -3.83 16 14 C -0.17 -0.32 5.89 -104.84 -0.62 -0.94 16 15 C 0.19 0.39 6.70 -38.70 -0.26 0.13 16 16 O -0.28 -0.91 8.57 -40.53 -0.35 -1.26 16 17 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 18 C -0.21 0.12 9.03 -39.47 -0.36 -0.24 16 19 C -0.05 0.07 8.66 -39.53 -0.34 -0.27 16 20 C -0.17 0.20 5.39 -104.67 -0.56 -0.37 16 21 C -0.06 0.11 2.81 36.00 0.10 0.21 16 22 O -0.54 0.77 12.76 -35.23 -0.45 0.32 16 23 Si 0.69 -1.53 29.77 -169.99 -5.06 -6.59 16 24 C -0.02 0.01 9.08 -39.20 -0.36 -0.35 16 25 C -0.13 0.24 5.39 -26.73 -0.14 0.10 16 26 C -0.10 0.06 4.49 -26.74 -0.12 -0.06 16 27 H 0.06 0.00 8.13 -51.93 -0.42 -0.43 16 28 H 0.06 0.01 8.13 -51.93 -0.42 -0.42 16 29 H 0.10 -0.25 8.14 -51.93 -0.42 -0.68 16 30 H 0.08 -0.06 8.11 -51.93 -0.42 -0.48 16 31 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 32 H 0.08 0.13 8.14 -51.93 -0.42 -0.30 16 33 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 34 H 0.40 -0.97 6.63 -40.82 -0.27 -1.24 16 35 H 0.06 -0.15 7.67 -51.93 -0.40 -0.55 16 36 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 37 H 0.10 -0.20 8.14 -51.93 -0.42 -0.62 16 38 H 0.14 -0.38 6.30 -52.48 -0.33 -0.71 16 39 H 0.13 -0.48 4.85 -52.49 -0.25 -0.73 16 40 H 0.11 -0.17 7.96 -51.93 -0.41 -0.58 16 41 H 0.38 -1.90 8.70 45.56 0.40 -1.50 16 42 H -0.25 -0.32 7.11 56.52 0.40 0.09 16 43 H -0.26 -0.02 7.11 56.52 0.40 0.38 16 44 H 0.14 -0.32 6.40 -52.49 -0.34 -0.65 16 45 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 46 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 47 H 0.08 -0.02 8.10 -51.93 -0.42 -0.44 16 48 H 0.08 0.05 8.10 -51.93 -0.42 -0.37 16 LS Contribution 389.33 15.07 5.87 5.87 Total: 0.00 -10.37 389.33 -9.43 -19.80 By element: Atomic # 1 Polarization: -5.69 SS G_CDS: -7.09 Total: -12.77 kcal Atomic # 6 Polarization: 3.84 SS G_CDS: -1.13 Total: 2.72 kcal Atomic # 7 Polarization: 0.00 SS G_CDS: -0.28 Total: -0.27 kcal Atomic # 8 Polarization: -7.00 SS G_CDS: -1.75 Total: -8.75 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.06 Total: -6.59 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -10.37 -9.43 -19.80 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_12496546.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -144.651 kcal (2) G-P(sol) polarization free energy of solvation -10.372 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -155.023 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.430 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.802 kcal (6) G-S(sol) free energy of system = (1) + (5) -164.453 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds