Wall clock time and date at job start Tue Mar 9 2021 12:51:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34231 * 116.99766 * 2 1 4 4 O 1.20830 * 119.99928 * 359.97438 * 3 2 1 5 5 C 1.50703 * 120.00026 * 179.97438 * 3 2 1 6 6 H 1.08996 * 109.46805 * 299.99865 * 5 3 2 7 7 C 1.52996 * 109.47130 * 60.00080 * 5 3 2 8 8 C 1.52997 * 109.47131 * 180.02562 * 7 5 3 9 9 C 1.52999 * 109.46991 * 299.99311 * 8 7 5 10 10 H 1.08993 * 109.47839 * 300.00447 * 9 8 7 11 11 N 1.46504 * 109.47050 * 179.97438 * 9 8 7 12 12 C 1.34777 * 119.99637 * 85.00741 * 11 9 8 13 13 O 1.21657 * 119.99906 * 359.97438 * 12 11 9 14 14 C 1.47057 * 120.00128 * 180.02562 * 12 11 9 15 15 C 1.35860 * 125.42875 * 180.02562 * 14 12 11 16 16 C 1.41595 * 107.72914 * 179.97438 * 15 14 12 17 17 C 1.40064 * 133.37926 * 179.97438 * 16 15 14 18 18 C 1.36478 * 119.82590 * 179.97438 * 17 16 15 19 19 C 1.38890 * 120.61592 * 0.10312 * 18 17 16 20 20 C 1.50702 * 119.67756 * 179.97438 * 19 18 17 21 21 O 1.42897 * 109.47234 * 119.97292 * 20 19 18 22 22 Si 1.86305 * 109.46687 * 359.97438 * 20 19 18 23 23 C 1.37716 * 120.65107 * 359.92485 * 19 18 17 24 24 C 1.39182 * 119.80487 * 0.02562 * 23 19 18 25 25 N 1.37492 * 133.18293 * 180.31692 * 24 23 19 26 26 C 1.53006 * 109.46626 * 60.00378 * 9 8 7 27 27 C 1.52997 * 109.47127 * 299.99539 * 26 9 8 28 28 H 1.09002 * 109.47020 * 179.97438 * 1 2 3 29 29 H 1.09004 * 109.47557 * 300.00055 * 1 2 3 30 30 H 1.09007 * 109.47457 * 60.00185 * 1 2 3 31 31 H 1.09001 * 109.46993 * 300.00313 * 7 5 3 32 32 H 1.09000 * 109.47380 * 59.99418 * 7 5 3 33 33 H 1.09002 * 109.47153 * 179.97438 * 8 7 5 34 34 H 1.08993 * 109.47194 * 60.00154 * 8 7 5 35 35 H 0.96998 * 120.00034 * 265.00623 * 11 9 8 36 36 H 1.08005 * 126.13713 * 359.97438 * 15 14 12 37 37 H 1.07997 * 120.08893 * 359.97438 * 17 16 15 38 38 H 1.08005 * 119.69091 * 180.02562 * 18 17 16 39 39 H 1.08995 * 109.47485 * 239.98194 * 20 19 18 40 40 H 0.96706 * 114.00291 * 179.97438 * 21 20 19 41 41 H 1.48502 * 110.00041 * 60.00614 * 22 20 19 42 42 H 1.48502 * 109.99793 * 181.31482 * 22 20 19 43 43 H 1.08005 * 120.09572 * 180.02562 * 23 19 18 44 44 H 0.97002 * 125.60340 * 359.94178 * 25 24 23 45 45 H 1.09001 * 109.46801 * 59.99811 * 26 9 8 46 46 H 1.09001 * 109.46998 * 179.97438 * 26 9 8 47 47 H 1.09002 * 109.47153 * 180.02562 * 27 26 9 48 48 H 1.08996 * 109.46952 * 300.00302 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2750 0.0006 6 1 3.9556 0.7811 0.8908 7 6 4.1138 0.5812 -1.2483 8 6 5.6417 0.6608 -1.2474 9 6 6.0760 2.1279 -1.2473 10 1 5.6869 2.6221 -2.1375 11 7 7.5390 2.2041 -1.2458 12 6 8.2184 2.1374 -2.4079 13 8 7.6168 2.0134 -3.4580 14 6 9.6870 2.2133 -2.4065 15 6 10.4796 2.1582 -3.5086 16 6 11.8243 2.2657 -3.0785 17 6 13.0523 2.2702 -3.7521 18 6 14.2136 2.3930 -3.0457 19 6 14.1906 2.5117 -1.6620 20 6 15.4857 2.6455 -0.9031 21 8 15.4916 3.8811 -0.1852 22 14 16.9129 2.6160 -2.1002 23 6 12.9960 2.5093 -0.9769 24 6 11.7983 2.3864 -1.6751 25 7 10.4803 2.3575 -1.2847 26 6 5.5284 2.8217 0.0016 27 6 4.0005 2.7421 0.0007 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8900 31 1 3.8048 -0.4641 -1.2482 32 1 3.7244 1.0750 -2.1385 33 1 6.0319 0.1661 -2.1369 34 1 6.0308 0.1666 -0.3572 35 1 8.0187 2.3026 -0.4085 36 1 10.1441 2.0515 -4.5297 37 1 13.0802 2.1768 -4.8277 38 1 15.1593 2.3966 -3.5673 39 1 15.5830 1.8171 -0.2014 40 1 16.2970 4.0342 0.3277 41 1 16.7921 3.7407 -3.0624 42 1 18.1974 2.7153 -1.3617 43 1 12.9886 2.6026 0.0991 44 1 10.1602 2.4248 -0.3715 45 1 5.9175 2.3274 0.8918 46 1 5.8381 3.8668 0.0019 47 1 3.6103 3.2368 0.8902 48 1 3.6115 3.2362 -0.8895 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475160_13158378.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:29 Heat of formation + Delta-G solvation = -97.446569 kcal Electronic energy + Delta-G solvation = -30975.137171 eV Core-core repulsion = 26575.712805 eV Total energy + Delta-G solvation = -4399.424366 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.161 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.66985 -41.78001 -40.79287 -39.23363 -38.70890 -37.42755 -37.08120 -35.47161 -33.30443 -32.07855 -31.81530 -30.73724 -30.39110 -28.63246 -26.95282 -25.11377 -24.00521 -23.93426 -22.98407 -22.00614 -21.80943 -21.34567 -20.79816 -19.53458 -18.58756 -18.54590 -17.95619 -17.87299 -17.51255 -17.31948 -16.91225 -16.45440 -16.34500 -15.91994 -15.51502 -15.33984 -15.09777 -15.05165 -14.96044 -14.77441 -14.68426 -14.27418 -14.20876 -14.01035 -13.86337 -13.74161 -13.47927 -13.42855 -13.08533 -12.75125 -12.69509 -12.51345 -12.36566 -12.31756 -12.11344 -11.80832 -11.71630 -11.66462 -11.53541 -11.38394 -11.13471 -10.91495 -10.50097 -10.26582 -9.28506 -8.78426 -4.95240 -0.30563 0.55866 1.02303 1.18680 1.27591 1.60133 1.66688 1.78226 1.91959 1.97740 2.27904 2.76077 3.31363 3.37612 3.39597 3.52122 3.61140 3.67193 3.78273 3.84528 3.91865 4.04585 4.07755 4.12827 4.16745 4.18315 4.20601 4.23915 4.26261 4.32331 4.39618 4.46118 4.49362 4.56419 4.60700 4.62835 4.80003 4.85250 4.92839 4.95039 4.97792 4.99131 5.08609 5.13122 5.25818 5.38191 5.41133 5.42668 5.57772 5.64183 5.99230 6.20287 6.35770 6.40024 6.73155 6.99871 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.463 3.537 4 O -0.504 6.504 5 C -0.081 4.081 6 H 0.111 0.889 7 C -0.108 4.108 8 C -0.128 4.128 9 C 0.142 3.858 10 H 0.096 0.904 11 N -0.726 5.726 12 C 0.586 3.414 13 O -0.515 6.515 14 C 0.012 3.988 15 C -0.099 4.099 16 C -0.117 4.117 17 C -0.050 4.050 18 C -0.143 4.143 19 C -0.041 4.041 20 C -0.076 4.076 21 O -0.537 6.537 22 Si 0.686 3.314 23 C -0.103 4.103 24 C 0.116 3.884 25 N -0.579 5.579 26 C -0.126 4.126 27 C -0.101 4.101 28 H 0.103 0.897 29 H 0.064 0.936 30 H 0.064 0.936 31 H 0.083 0.917 32 H 0.074 0.926 33 H 0.078 0.922 34 H 0.070 0.930 35 H 0.396 0.604 36 H 0.159 0.841 37 H 0.133 0.867 38 H 0.130 0.870 39 H 0.077 0.923 40 H 0.380 0.620 41 H -0.254 1.254 42 H -0.262 1.262 43 H 0.125 0.875 44 H 0.417 0.583 45 H 0.073 0.927 46 H 0.079 0.921 47 H 0.080 0.920 48 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.432 -4.027 3.659 5.960 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.392 6.392 5 C -0.100 4.100 6 H 0.129 0.871 7 C -0.146 4.146 8 C -0.166 4.166 9 C 0.038 3.962 10 H 0.114 0.886 11 N -0.377 5.377 12 C 0.373 3.627 13 O -0.390 6.390 14 C -0.097 4.097 15 C -0.125 4.125 16 C -0.122 4.122 17 C -0.069 4.069 18 C -0.161 4.161 19 C -0.043 4.043 20 C -0.186 4.186 21 O -0.344 6.344 22 Si 0.587 3.413 23 C -0.124 4.124 24 C 0.006 3.994 25 N -0.184 5.184 26 C -0.164 4.164 27 C -0.139 4.139 28 H 0.122 0.878 29 H 0.082 0.918 30 H 0.083 0.917 31 H 0.102 0.898 32 H 0.092 0.908 33 H 0.097 0.903 34 H 0.089 0.911 35 H 0.229 0.771 36 H 0.176 0.824 37 H 0.151 0.849 38 H 0.147 0.853 39 H 0.095 0.905 40 H 0.228 0.772 41 H -0.179 1.179 42 H -0.188 1.188 43 H 0.143 0.857 44 H 0.255 0.745 45 H 0.091 0.909 46 H 0.097 0.903 47 H 0.099 0.901 48 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 1.710 -3.326 2.403 4.446 hybrid contribution -0.013 0.837 2.095 2.256 sum 1.697 -2.490 4.498 5.414 Atomic orbital electron populations 1.23320 0.75932 1.03998 1.02722 1.86503 1.23732 1.33343 1.83887 1.23779 0.91995 0.81427 0.72193 1.90695 1.67190 1.36379 1.44887 1.21171 0.87053 0.99467 1.02304 0.87062 1.21497 0.95325 1.01708 0.96115 1.21927 0.95025 0.96207 1.03488 1.21128 0.78430 0.96508 1.00084 0.88601 1.45952 1.07799 1.75336 1.08573 1.17196 0.84766 0.76600 0.84147 1.90887 1.68418 1.48763 1.30955 1.20082 0.90507 1.12038 0.87093 1.20975 0.90340 1.02809 0.98425 1.18222 0.93858 1.07874 0.92214 1.20351 0.89826 0.96770 0.99941 1.20416 0.98233 1.04603 0.92881 1.18927 0.92776 0.99591 0.93026 1.24820 1.03546 0.88612 1.01600 1.86593 1.43767 1.38420 1.65625 0.94920 0.75177 0.90085 0.81085 1.19820 0.88632 1.04371 0.99561 1.18273 0.84412 1.02678 0.94028 1.41872 1.04353 1.63840 1.08307 1.21825 0.95602 1.01657 0.97296 1.21389 0.94384 0.93517 1.04599 0.87844 0.91771 0.91729 0.89788 0.90777 0.90328 0.91142 0.77053 0.82379 0.84881 0.85277 0.90486 0.77224 1.17853 1.18781 0.85689 0.74545 0.90865 0.90278 0.90093 0.90295 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.55 101.05 1.07 1.05 16 2 O -0.36 -0.42 10.47 -39.26 -0.41 -0.83 16 3 C 0.46 0.74 7.26 36.01 0.26 1.00 16 4 O -0.50 -2.31 15.73 -18.75 -0.30 -2.60 16 5 C -0.08 0.11 2.63 -91.77 -0.24 -0.13 16 6 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 7 C -0.11 0.17 5.13 -26.73 -0.14 0.03 16 8 C -0.13 0.22 5.49 -26.73 -0.15 0.07 16 9 C 0.14 -0.22 2.45 -67.93 -0.17 -0.39 16 10 H 0.10 0.05 7.58 -51.93 -0.39 -0.35 16 11 N -0.73 1.26 5.07 -54.99 -0.28 0.98 16 12 C 0.59 0.91 7.76 -12.68 -0.10 0.81 16 13 O -0.52 -2.65 16.50 5.23 0.09 -2.57 16 14 C 0.01 0.01 6.96 -82.29 -0.57 -0.56 16 15 C -0.10 -0.20 10.53 -39.15 -0.41 -0.61 16 16 C -0.12 -0.23 6.16 -106.93 -0.66 -0.89 16 17 C -0.05 -0.04 10.06 -39.53 -0.40 -0.43 16 18 C -0.14 -0.06 8.59 -39.98 -0.34 -0.40 16 19 C -0.04 -0.04 5.43 -104.57 -0.57 -0.61 16 20 C -0.08 0.04 2.80 36.01 0.10 0.14 16 21 O -0.54 -0.38 12.73 -35.23 -0.45 -0.83 16 22 Si 0.69 -0.82 29.75 -169.99 -5.06 -5.87 16 23 C -0.10 -0.10 9.61 -39.42 -0.38 -0.48 16 24 C 0.12 0.15 7.25 -83.98 -0.61 -0.46 16 25 N -0.58 0.39 6.07 -7.36 -0.04 0.35 16 26 C -0.13 0.40 5.39 -26.73 -0.14 0.25 16 27 C -0.10 0.16 4.50 -26.73 -0.12 0.04 16 28 H 0.10 -0.30 8.14 -51.93 -0.42 -0.73 16 29 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 30 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 31 H 0.08 -0.14 8.11 -51.93 -0.42 -0.57 16 32 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 33 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 34 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 35 H 0.40 -1.77 7.66 -40.82 -0.31 -2.08 16 36 H 0.16 0.21 8.06 -52.48 -0.42 -0.22 16 37 H 0.13 -0.19 8.06 -52.49 -0.42 -0.61 16 38 H 0.13 -0.19 4.82 -52.48 -0.25 -0.45 16 39 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 40 H 0.38 -1.22 8.74 45.56 0.40 -0.83 16 41 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 42 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 43 H 0.13 -0.03 8.06 -52.48 -0.42 -0.45 16 44 H 0.42 -1.61 8.12 -40.82 -0.33 -1.94 16 45 H 0.07 -0.33 8.14 -51.93 -0.42 -0.75 16 46 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 47 H 0.08 -0.09 8.10 -51.93 -0.42 -0.51 16 48 H 0.08 -0.02 8.10 -51.93 -0.42 -0.44 16 LS Contribution 395.75 15.07 5.96 5.96 Total: 0.00 -10.38 395.75 -10.89 -21.27 By element: Atomic # 1 Polarization: -7.45 SS G_CDS: -6.84 Total: -14.29 kcal Atomic # 6 Polarization: 2.01 SS G_CDS: -3.57 Total: -1.56 kcal Atomic # 7 Polarization: 1.65 SS G_CDS: -0.32 Total: 1.32 kcal Atomic # 8 Polarization: -5.76 SS G_CDS: -1.07 Total: -6.83 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: -5.06 Total: -5.87 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -10.38 -10.89 -21.27 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_13158378.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.179 kcal (2) G-P(sol) polarization free energy of solvation -10.376 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.556 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.891 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.267 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.447 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds