Wall clock time and date at job start Tue Mar 9 2021 12:51:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34231 * 116.99766 * 2 1 4 4 O 1.20830 * 119.99928 * 359.97438 * 3 2 1 5 5 C 1.50703 * 120.00026 * 179.97438 * 3 2 1 6 6 H 1.08996 * 109.46805 * 299.99865 * 5 3 2 7 7 C 1.52996 * 109.47130 * 60.00080 * 5 3 2 8 8 C 1.52997 * 109.47131 * 180.02562 * 7 5 3 9 9 C 1.52999 * 109.46991 * 299.99311 * 8 7 5 10 10 H 1.08993 * 109.47839 * 300.00447 * 9 8 7 11 11 N 1.46504 * 109.47050 * 179.97438 * 9 8 7 12 12 C 1.34777 * 119.99637 * 85.00741 * 11 9 8 13 13 O 1.21657 * 119.99906 * 359.97438 * 12 11 9 14 14 C 1.47057 * 120.00128 * 180.02562 * 12 11 9 15 15 C 1.35860 * 125.42875 * 180.02562 * 14 12 11 16 16 C 1.41595 * 107.72914 * 179.97438 * 15 14 12 17 17 C 1.40064 * 133.37926 * 179.97438 * 16 15 14 18 18 C 1.36478 * 119.82590 * 179.97438 * 17 16 15 19 19 C 1.38890 * 120.61592 * 0.10312 * 18 17 16 20 20 C 1.50702 * 119.67756 * 179.97438 * 19 18 17 21 21 O 1.42897 * 109.47234 * 119.97292 * 20 19 18 22 22 Si 1.86305 * 109.46687 * 359.97438 * 20 19 18 23 23 C 1.37716 * 120.65107 * 359.92485 * 19 18 17 24 24 C 1.39182 * 119.80487 * 0.02562 * 23 19 18 25 25 N 1.37492 * 133.18293 * 180.31692 * 24 23 19 26 26 C 1.53006 * 109.46626 * 60.00378 * 9 8 7 27 27 C 1.52997 * 109.47127 * 299.99539 * 26 9 8 28 28 H 1.09002 * 109.47020 * 179.97438 * 1 2 3 29 29 H 1.09004 * 109.47557 * 300.00055 * 1 2 3 30 30 H 1.09007 * 109.47457 * 60.00185 * 1 2 3 31 31 H 1.09001 * 109.46993 * 300.00313 * 7 5 3 32 32 H 1.09000 * 109.47380 * 59.99418 * 7 5 3 33 33 H 1.09002 * 109.47153 * 179.97438 * 8 7 5 34 34 H 1.08993 * 109.47194 * 60.00154 * 8 7 5 35 35 H 0.96998 * 120.00034 * 265.00623 * 11 9 8 36 36 H 1.08005 * 126.13713 * 359.97438 * 15 14 12 37 37 H 1.07997 * 120.08893 * 359.97438 * 17 16 15 38 38 H 1.08005 * 119.69091 * 180.02562 * 18 17 16 39 39 H 1.08995 * 109.47485 * 239.98194 * 20 19 18 40 40 H 0.96706 * 114.00291 * 179.97438 * 21 20 19 41 41 H 1.48502 * 110.00041 * 60.00614 * 22 20 19 42 42 H 1.48502 * 109.99793 * 181.31482 * 22 20 19 43 43 H 1.08005 * 120.09572 * 180.02562 * 23 19 18 44 44 H 0.97002 * 125.60340 * 359.94178 * 25 24 23 45 45 H 1.09001 * 109.46801 * 59.99811 * 26 9 8 46 46 H 1.09001 * 109.46998 * 179.97438 * 26 9 8 47 47 H 1.09002 * 109.47153 * 180.02562 * 27 26 9 48 48 H 1.08996 * 109.46952 * 300.00302 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2750 0.0006 6 1 3.9556 0.7811 0.8908 7 6 4.1138 0.5812 -1.2483 8 6 5.6417 0.6608 -1.2474 9 6 6.0760 2.1279 -1.2473 10 1 5.6869 2.6221 -2.1375 11 7 7.5390 2.2041 -1.2458 12 6 8.2184 2.1374 -2.4079 13 8 7.6168 2.0134 -3.4580 14 6 9.6870 2.2133 -2.4065 15 6 10.4796 2.1582 -3.5086 16 6 11.8243 2.2657 -3.0785 17 6 13.0523 2.2702 -3.7521 18 6 14.2136 2.3930 -3.0457 19 6 14.1906 2.5117 -1.6620 20 6 15.4857 2.6455 -0.9031 21 8 15.4916 3.8811 -0.1852 22 14 16.9129 2.6160 -2.1002 23 6 12.9960 2.5093 -0.9769 24 6 11.7983 2.3864 -1.6751 25 7 10.4803 2.3575 -1.2847 26 6 5.5284 2.8217 0.0016 27 6 4.0005 2.7421 0.0007 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8900 31 1 3.8048 -0.4641 -1.2482 32 1 3.7244 1.0750 -2.1385 33 1 6.0319 0.1661 -2.1369 34 1 6.0308 0.1666 -0.3572 35 1 8.0187 2.3026 -0.4085 36 1 10.1441 2.0515 -4.5297 37 1 13.0802 2.1768 -4.8277 38 1 15.1593 2.3966 -3.5673 39 1 15.5830 1.8171 -0.2014 40 1 16.2970 4.0342 0.3277 41 1 16.7921 3.7407 -3.0624 42 1 18.1974 2.7153 -1.3617 43 1 12.9886 2.6026 0.0991 44 1 10.1602 2.4248 -0.3715 45 1 5.9175 2.3274 0.8918 46 1 5.8381 3.8668 0.0019 47 1 3.6103 3.2368 0.8902 48 1 3.6115 3.2362 -0.8895 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14475160_13158378.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:28 Heat of formation + Delta-G solvation = -97.639514 kcal Electronic energy + Delta-G solvation = -30975.145538 eV Core-core repulsion = 26575.712805 eV Total energy + Delta-G solvation = -4399.432733 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.161 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -42.70496 -41.84722 -40.86083 -39.21469 -38.73007 -37.56220 -37.07818 -35.51485 -33.32863 -31.97501 -31.80286 -30.72994 -30.40799 -28.60834 -26.95375 -25.10169 -23.96056 -23.86628 -23.02642 -22.00935 -21.81713 -21.35948 -20.78536 -19.53645 -18.65167 -18.51488 -17.97758 -17.89387 -17.55454 -17.35576 -16.92395 -16.49864 -16.38616 -15.90363 -15.45425 -15.28033 -15.10911 -15.06119 -14.95587 -14.81858 -14.68789 -14.28664 -14.24503 -14.00806 -13.88054 -13.71210 -13.49636 -13.32353 -13.03686 -12.74198 -12.69462 -12.43145 -12.31450 -12.22167 -12.15724 -11.86837 -11.69311 -11.61479 -11.54319 -11.46958 -11.22750 -10.96273 -10.45067 -10.26420 -9.31863 -8.81119 -4.86762 -0.36175 0.53090 0.94893 1.07908 1.34321 1.64630 1.67592 1.76418 1.96167 2.01814 2.18391 2.74143 3.40549 3.45469 3.49112 3.59085 3.65226 3.71536 3.87402 3.88741 4.03993 4.05612 4.16369 4.23323 4.25596 4.26793 4.27096 4.29479 4.33021 4.40563 4.44933 4.48262 4.56665 4.64468 4.67064 4.75701 4.89320 4.90176 4.99449 5.01643 5.06963 5.08038 5.18471 5.22290 5.30584 5.34122 5.40324 5.42114 5.55332 5.58837 5.98406 6.26745 6.45197 6.61944 6.63630 6.96482 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.362 6.362 3 C 0.461 3.539 4 O -0.541 6.541 5 C -0.075 4.075 6 H 0.138 0.862 7 C -0.103 4.103 8 C -0.121 4.121 9 C 0.142 3.858 10 H 0.070 0.930 11 N -0.707 5.707 12 C 0.587 3.413 13 O -0.559 6.559 14 C 0.012 3.988 15 C -0.119 4.119 16 C -0.136 4.136 17 C -0.059 4.059 18 C -0.149 4.149 19 C -0.053 4.053 20 C -0.082 4.082 21 O -0.558 6.558 22 Si 0.762 3.238 23 C -0.109 4.109 24 C 0.107 3.893 25 N -0.562 5.562 26 C -0.114 4.114 27 C -0.099 4.099 28 H 0.129 0.871 29 H 0.061 0.939 30 H 0.058 0.942 31 H 0.088 0.912 32 H 0.058 0.942 33 H 0.058 0.942 34 H 0.092 0.908 35 H 0.413 0.587 36 H 0.155 0.845 37 H 0.148 0.852 38 H 0.144 0.856 39 H 0.100 0.900 40 H 0.395 0.605 41 H -0.301 1.301 42 H -0.287 1.287 43 H 0.137 0.863 44 H 0.432 0.568 45 H 0.100 0.900 46 H 0.083 0.917 47 H 0.080 0.920 48 H 0.058 0.942 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.332 -4.893 5.604 8.151 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.278 6.278 3 C 0.306 3.694 4 O -0.431 6.431 5 C -0.093 4.093 6 H 0.156 0.844 7 C -0.141 4.141 8 C -0.159 4.159 9 C 0.038 3.962 10 H 0.088 0.912 11 N -0.358 5.358 12 C 0.374 3.626 13 O -0.437 6.437 14 C -0.098 4.098 15 C -0.146 4.146 16 C -0.141 4.141 17 C -0.078 4.078 18 C -0.167 4.167 19 C -0.055 4.055 20 C -0.191 4.191 21 O -0.368 6.368 22 Si 0.668 3.332 23 C -0.130 4.130 24 C -0.003 4.003 25 N -0.169 5.169 26 C -0.152 4.152 27 C -0.137 4.137 28 H 0.147 0.853 29 H 0.080 0.920 30 H 0.077 0.923 31 H 0.107 0.893 32 H 0.077 0.923 33 H 0.077 0.923 34 H 0.110 0.890 35 H 0.249 0.751 36 H 0.173 0.827 37 H 0.166 0.834 38 H 0.161 0.839 39 H 0.118 0.882 40 H 0.246 0.754 41 H -0.229 1.229 42 H -0.215 1.215 43 H 0.155 0.845 44 H 0.273 0.727 45 H 0.119 0.881 46 H 0.101 0.899 47 H 0.098 0.902 48 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges 2.611 -4.217 4.426 6.647 hybrid contribution -0.304 1.136 1.481 1.891 sum 2.307 -3.081 5.907 7.051 Atomic orbital electron populations 1.23516 0.75162 1.05599 1.02347 1.86507 1.24652 1.33143 1.83543 1.24395 0.93086 0.80980 0.70951 1.90677 1.68182 1.37480 1.46729 1.21257 0.85014 0.99780 1.03293 0.84390 1.21433 0.95429 1.01763 0.95490 1.21851 0.94666 0.95843 1.03548 1.21120 0.78255 0.96777 1.00058 0.91182 1.45794 1.07809 1.73726 1.08428 1.17265 0.84874 0.76164 0.84301 1.90868 1.69165 1.51002 1.32630 1.19984 0.90335 1.11918 0.87541 1.21092 0.90889 1.03828 0.98796 1.18442 0.94111 1.08571 0.92938 1.20608 0.89636 0.96586 1.00925 1.20641 0.98773 1.04286 0.93044 1.19218 0.93514 0.99360 0.93420 1.24966 1.02857 0.89036 1.02207 1.86547 1.45175 1.39014 1.66080 0.94063 0.73075 0.87819 0.78210 1.19986 0.88456 1.04347 1.00201 1.18410 0.85091 1.02857 0.93963 1.41753 1.03541 1.62896 1.08676 1.21753 0.94170 1.02043 0.97236 1.21356 0.95481 0.93296 1.03605 0.85291 0.91984 0.92329 0.89298 0.92348 0.92281 0.88965 0.75064 0.82738 0.83390 0.83877 0.88185 0.75439 1.22915 1.21463 0.84510 0.72688 0.88143 0.89869 0.90185 0.92288 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.55 113.37 1.20 1.17 16 2 O -0.36 -0.88 10.47 -51.42 -0.54 -1.42 16 3 C 0.46 1.70 7.26 71.24 0.52 2.21 16 4 O -0.54 -5.65 15.73 21.95 0.35 -5.31 16 5 C -0.07 0.24 2.63 -11.54 -0.03 0.21 16 6 H 0.14 -1.15 8.14 -2.39 -0.02 -1.17 16 7 C -0.10 0.31 5.13 30.59 0.16 0.47 16 8 C -0.12 0.46 5.49 30.59 0.17 0.63 16 9 C 0.14 -0.45 2.45 44.99 0.11 -0.34 16 10 H 0.07 0.19 7.58 -2.39 -0.02 0.17 16 11 N -0.71 2.80 5.07 -446.13 -2.26 0.53 16 12 C 0.59 2.25 7.76 86.56 0.67 2.93 16 13 O -0.56 -6.84 16.50 -4.21 -0.07 -6.91 16 14 C 0.01 0.03 6.96 39.91 0.28 0.31 16 15 C -0.12 -0.63 10.53 22.55 0.24 -0.39 16 16 C -0.14 -0.62 6.16 -21.36 -0.13 -0.75 16 17 C -0.06 -0.11 10.06 22.30 0.22 0.11 16 18 C -0.15 -0.12 8.59 22.01 0.19 0.07 16 19 C -0.05 -0.07 5.43 -19.83 -0.11 -0.18 16 20 C -0.08 0.17 2.80 71.24 0.20 0.37 16 21 O -0.56 -0.32 12.73 -148.98 -1.90 -2.22 16 22 Si 0.76 -2.07 29.75 68.60 2.04 -0.03 16 23 C -0.11 -0.15 9.61 22.37 0.22 0.06 16 24 C 0.11 0.26 7.25 39.13 0.28 0.55 16 25 N -0.56 1.04 6.07 -177.19 -1.08 -0.03 16 26 C -0.11 0.86 5.39 30.60 0.16 1.03 16 27 C -0.10 0.31 4.50 30.59 0.14 0.45 16 28 H 0.13 -0.85 8.14 -2.39 -0.02 -0.87 16 29 H 0.06 -0.03 8.13 -2.38 -0.02 -0.05 16 30 H 0.06 0.01 8.13 -2.38 -0.02 -0.01 16 31 H 0.09 -0.33 8.11 -2.39 -0.02 -0.35 16 32 H 0.06 0.01 8.14 -2.39 -0.02 0.00 16 33 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 34 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 35 H 0.41 -4.41 7.66 -92.71 -0.71 -5.12 16 36 H 0.15 0.76 8.06 -2.91 -0.02 0.74 16 37 H 0.15 -0.34 8.06 -2.91 -0.02 -0.37 16 38 H 0.14 -0.44 4.82 -2.91 -0.01 -0.46 16 39 H 0.10 -0.66 7.96 -2.39 -0.02 -0.68 16 40 H 0.40 -2.89 8.74 -74.05 -0.65 -3.54 16 41 H -0.30 -1.55 7.11 99.48 0.71 -0.85 16 42 H -0.29 -0.39 7.11 99.48 0.71 0.32 16 43 H 0.14 -0.23 8.06 -2.91 -0.02 -0.25 16 44 H 0.43 -3.96 8.12 -92.71 -0.75 -4.71 16 45 H 0.10 -1.23 8.14 -2.39 -0.02 -1.25 16 46 H 0.08 -0.63 8.14 -2.39 -0.02 -0.65 16 47 H 0.08 -0.20 8.10 -2.39 -0.02 -0.22 16 48 H 0.06 0.06 8.10 -2.39 -0.02 0.04 16 Total: 0.00 -26.45 395.75 -0.03 -26.47 By element: Atomic # 1 Polarization: -18.93 SS G_CDS: -1.05 Total: -19.98 kcal Atomic # 6 Polarization: 4.42 SS G_CDS: 4.48 Total: 8.90 kcal Atomic # 7 Polarization: 3.84 SS G_CDS: -3.34 Total: 0.50 kcal Atomic # 8 Polarization: -13.70 SS G_CDS: -2.16 Total: -15.86 kcal Atomic # 14 Polarization: -2.07 SS G_CDS: 2.04 Total: -0.03 kcal Total: -26.45 -0.03 -26.47 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_13158378.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.165 kcal (2) G-P(sol) polarization free energy of solvation -26.447 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.612 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.027 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.474 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.640 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds