Wall clock time and date at job start Tue Mar 9 2021 12:52:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34231 * 116.99493 * 2 1 4 4 O 1.20819 * 120.00171 * 359.97438 * 3 2 1 5 5 C 1.50703 * 119.99678 * 180.02562 * 3 2 1 6 6 H 1.08998 * 109.47080 * 299.99704 * 5 3 2 7 7 C 1.52993 * 109.47211 * 59.99827 * 5 3 2 8 8 C 1.53004 * 109.47123 * 179.97438 * 7 5 3 9 9 C 1.52994 * 109.47427 * 300.00393 * 8 7 5 10 10 H 1.08998 * 109.46746 * 299.99742 * 9 8 7 11 11 N 1.46500 * 109.47609 * 179.97438 * 9 8 7 12 12 C 1.34779 * 119.99907 * 84.99161 * 11 9 8 13 13 O 1.21687 * 120.00145 * 0.02562 * 12 11 9 14 14 C 1.46680 * 119.99552 * 180.02562 * 12 11 9 15 15 C 1.37876 * 126.23018 * 180.02562 * 14 12 11 16 16 C 1.50698 * 126.45752 * 0.02562 * 15 14 12 17 17 C 1.39838 * 107.08226 * 180.02562 * 15 14 12 18 18 C 1.35453 * 107.86773 * 0.02562 * 17 15 14 19 19 C 1.50699 * 125.56433 * 180.02562 * 18 17 15 20 20 O 1.42901 * 109.46830 * 120.02216 * 19 18 17 21 21 Si 1.86298 * 109.46950 * 0.02653 * 19 18 17 22 22 N 1.35535 * 108.87065 * 0.26200 * 18 17 15 23 23 C 1.53001 * 109.47471 * 59.99571 * 9 8 7 24 24 C 1.53001 * 109.46982 * 180.02562 * 5 3 2 25 25 H 1.09002 * 109.47307 * 60.00315 * 1 2 3 26 26 H 1.09009 * 109.46812 * 180.02562 * 1 2 3 27 27 H 1.09003 * 109.47729 * 299.99765 * 1 2 3 28 28 H 1.08997 * 109.47210 * 299.99655 * 7 5 3 29 29 H 1.08998 * 109.47199 * 59.99950 * 7 5 3 30 30 H 1.09006 * 109.47267 * 179.97438 * 8 7 5 31 31 H 1.09007 * 109.46683 * 60.00554 * 8 7 5 32 32 H 0.97000 * 120.00058 * 265.00326 * 11 9 8 33 33 H 1.08999 * 109.46866 * 269.97503 * 16 15 14 34 34 H 1.08995 * 109.47364 * 29.97420 * 16 15 14 35 35 H 1.08993 * 109.46928 * 149.97607 * 16 15 14 36 36 H 1.07996 * 126.06588 * 180.02562 * 17 15 14 37 37 H 1.08991 * 109.47351 * 240.02364 * 19 18 17 38 38 H 0.96708 * 114.00246 * 299.99864 * 20 19 18 39 39 H 1.48506 * 109.99834 * 180.02562 * 21 19 18 40 40 H 1.48502 * 110.00011 * 301.31529 * 21 19 18 41 41 H 0.96993 * 125.67780 * 179.70624 * 22 18 17 42 42 H 1.08998 * 109.46996 * 60.00325 * 23 9 8 43 43 H 1.08997 * 109.47391 * 180.02562 * 23 9 8 44 44 H 1.08998 * 109.47452 * 59.99637 * 24 5 3 45 45 H 1.09005 * 109.46964 * 299.99278 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5662 1.2750 -0.0006 6 1 3.9563 0.7808 0.8892 7 6 4.1128 0.5817 -1.2501 8 6 5.6407 0.6624 -1.2510 9 6 6.0740 2.1297 -1.2511 10 1 5.6836 2.6237 -2.1409 11 7 7.5369 2.2070 -1.2514 12 6 8.2151 2.1407 -2.4142 13 8 7.6122 2.0172 -3.4640 14 6 9.6799 2.2176 -2.4143 15 6 10.4986 2.1640 -3.5224 16 6 10.0572 2.0165 -4.9557 17 6 11.8158 2.2723 -3.0655 18 6 11.7795 2.3871 -1.7163 19 6 12.9799 2.5281 -0.8161 20 8 12.8920 3.7584 -0.0944 21 14 14.5324 2.5218 -1.8458 22 7 10.4878 2.3490 -1.3076 23 6 5.5274 2.8231 -0.0016 24 6 4.0000 2.7422 0.0002 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3633 -1.0278 0.0005 27 1 -0.3635 0.5138 0.8900 28 1 3.8039 -0.4636 -1.2501 29 1 3.7227 1.0759 -2.1398 30 1 6.0302 0.1680 -2.1410 31 1 6.0311 0.1683 -0.3612 32 1 8.0175 2.3057 -0.4146 33 1 10.0045 0.9586 -5.2126 34 1 9.0743 2.4704 -5.0817 35 1 10.7736 2.5139 -5.6095 36 1 12.7043 2.2657 -3.6794 37 1 13.0067 1.6956 -0.1131 38 1 12.8640 4.5438 -0.6579 39 1 15.7235 2.6597 -0.9696 40 1 14.6195 1.2610 -2.6256 41 1 10.1833 2.4071 -0.3886 42 1 5.9178 2.3291 0.8882 43 1 5.8357 3.8685 -0.0019 44 1 3.6106 3.2358 0.8906 45 1 3.6099 3.2369 -0.8894 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475160_13940406.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:31 Heat of formation + Delta-G solvation = -122.731476 kcal Electronic energy + Delta-G solvation = -27484.395055 eV Core-core repulsion = 23468.552674 eV Total energy + Delta-G solvation = -4015.842381 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.161 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -42.60128 -41.75632 -40.58550 -38.93453 -37.81386 -37.40862 -35.47296 -33.49809 -32.15141 -31.98933 -30.89618 -28.63460 -28.13009 -26.89033 -24.73628 -23.96065 -22.60967 -21.89327 -21.49087 -21.16749 -20.28954 -19.48361 -18.56996 -18.16841 -17.80191 -17.41944 -17.22758 -16.77262 -16.32798 -16.11734 -15.52108 -15.39089 -15.31155 -15.05324 -14.99257 -14.56415 -14.46000 -14.23441 -13.99864 -13.88766 -13.68137 -13.57111 -13.47385 -13.40576 -13.06042 -12.91280 -12.69913 -12.48518 -12.34118 -12.16285 -12.02587 -11.79603 -11.69436 -11.50621 -11.31342 -10.96377 -10.73888 -10.19669 -9.82155 -9.15850 -5.07582 0.36650 1.09947 1.19630 1.51695 1.62848 1.68628 1.82837 1.99973 2.14797 2.36870 3.25582 3.39777 3.43715 3.50006 3.58484 3.77708 3.84996 3.94822 4.09340 4.14747 4.15426 4.17595 4.18425 4.21983 4.24572 4.28492 4.34981 4.49694 4.57669 4.64193 4.74334 4.80861 4.85774 4.87370 4.97110 4.99910 5.02510 5.11834 5.16376 5.21964 5.32840 5.41048 5.46182 5.65151 5.90535 6.23142 6.34597 6.43484 6.74050 7.14492 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.464 3.536 4 O -0.504 6.504 5 C -0.081 4.081 6 H 0.111 0.889 7 C -0.108 4.108 8 C -0.128 4.128 9 C 0.144 3.856 10 H 0.095 0.905 11 N -0.730 5.730 12 C 0.592 3.408 13 O -0.520 6.520 14 C -0.057 4.057 15 C -0.063 4.063 16 C -0.093 4.093 17 C -0.201 4.201 18 C 0.026 3.974 19 C -0.055 4.055 20 O -0.544 6.544 21 Si 0.721 3.279 22 N -0.524 5.524 23 C -0.126 4.126 24 C -0.101 4.101 25 H 0.064 0.936 26 H 0.103 0.897 27 H 0.063 0.937 28 H 0.083 0.917 29 H 0.073 0.927 30 H 0.077 0.923 31 H 0.068 0.932 32 H 0.393 0.607 33 H 0.068 0.932 34 H 0.081 0.919 35 H 0.066 0.934 36 H 0.150 0.850 37 H 0.115 0.885 38 H 0.383 0.617 39 H -0.253 1.253 40 H -0.253 1.253 41 H 0.416 0.584 42 H 0.072 0.928 43 H 0.078 0.922 44 H 0.080 0.920 45 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.254 -0.022 1.856 2.920 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.391 6.391 5 C -0.100 4.100 6 H 0.129 0.871 7 C -0.146 4.146 8 C -0.166 4.166 9 C 0.040 3.960 10 H 0.113 0.887 11 N -0.381 5.381 12 C 0.380 3.620 13 O -0.395 6.395 14 C -0.170 4.170 15 C -0.072 4.072 16 C -0.150 4.150 17 C -0.226 4.226 18 C -0.092 4.092 19 C -0.165 4.165 20 O -0.349 6.349 21 Si 0.620 3.380 22 N -0.121 5.121 23 C -0.164 4.164 24 C -0.139 4.139 25 H 0.083 0.917 26 H 0.121 0.879 27 H 0.082 0.918 28 H 0.101 0.899 29 H 0.092 0.908 30 H 0.096 0.904 31 H 0.087 0.913 32 H 0.227 0.773 33 H 0.087 0.913 34 H 0.100 0.900 35 H 0.084 0.916 36 H 0.168 0.832 37 H 0.132 0.868 38 H 0.231 0.769 39 H -0.178 1.178 40 H -0.177 1.177 41 H 0.254 0.746 42 H 0.090 0.910 43 H 0.097 0.903 44 H 0.099 0.901 45 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 2.232 -0.617 1.574 2.800 hybrid contribution -0.683 -0.262 1.442 1.617 sum 1.549 -0.879 3.017 3.503 Atomic orbital electron populations 1.23318 0.75950 1.03985 1.02716 1.86506 1.23719 1.33358 1.83894 1.23780 0.91997 0.81419 0.72183 1.90690 1.67187 1.36376 1.44891 1.21171 0.87038 0.99496 1.02291 0.87106 1.21495 0.95393 1.01643 0.96087 1.21927 0.94947 0.96370 1.03376 1.21074 0.78707 0.96315 0.99909 0.88698 1.45963 1.07640 1.75908 1.08601 1.17025 0.84762 0.76301 0.83947 1.90841 1.68499 1.49334 1.30861 1.20243 0.90290 1.19311 0.87152 1.19944 0.91624 1.00810 0.94810 1.20393 1.02505 1.02311 0.89839 1.20611 0.97529 1.11843 0.92570 1.21094 0.85347 1.07839 0.94958 1.24958 1.02298 0.89668 0.99596 1.86497 1.96921 1.14993 1.36515 0.93988 0.74116 0.88020 0.81835 1.41844 1.05704 1.56027 1.08483 1.21813 0.95560 1.01641 0.97356 1.21381 0.94453 0.93480 1.04552 0.91724 0.87861 0.91780 0.89859 0.90794 0.90388 0.91293 0.77326 0.91297 0.89986 0.91552 0.83242 0.86766 0.76851 1.17818 1.17688 0.74640 0.90972 0.90308 0.90128 0.90313 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.55 101.05 1.07 1.05 16 2 O -0.36 -0.50 10.47 -39.26 -0.41 -0.91 16 3 C 0.46 0.84 7.26 36.01 0.26 1.11 16 4 O -0.50 -2.39 15.73 -18.74 -0.29 -2.69 16 5 C -0.08 0.09 2.63 -91.77 -0.24 -0.15 16 6 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 7 C -0.11 0.13 5.14 -26.73 -0.14 -0.01 16 8 C -0.13 0.16 5.49 -26.73 -0.15 0.01 16 9 C 0.14 -0.16 2.45 -67.93 -0.17 -0.33 16 10 H 0.09 0.08 7.58 -51.93 -0.39 -0.31 16 11 N -0.73 0.86 5.07 -55.12 -0.28 0.58 16 12 C 0.59 1.17 7.75 -12.85 -0.10 1.07 16 13 O -0.52 -2.69 14.46 5.20 0.08 -2.62 16 14 C -0.06 -0.08 7.06 -81.98 -0.58 -0.65 16 15 C -0.06 -0.12 6.21 -104.16 -0.65 -0.76 16 16 C -0.09 -0.14 9.83 36.00 0.35 0.21 16 17 C -0.20 -0.02 9.27 -39.98 -0.37 -0.39 16 18 C 0.03 -0.02 6.47 -81.95 -0.53 -0.55 16 19 C -0.05 0.10 3.08 36.01 0.11 0.21 16 20 O -0.54 0.89 12.88 -35.23 -0.45 0.44 16 21 Si 0.72 -1.67 30.54 -169.99 -5.19 -6.86 16 22 N -0.52 0.53 5.99 -5.69 -0.03 0.49 16 23 C -0.13 0.34 5.39 -26.75 -0.14 0.20 16 24 C -0.10 0.13 4.49 -26.75 -0.12 0.01 16 25 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 26 H 0.10 -0.29 8.14 -51.92 -0.42 -0.71 16 27 H 0.06 -0.02 8.13 -51.93 -0.42 -0.45 16 28 H 0.08 -0.11 8.11 -51.93 -0.42 -0.53 16 29 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 30 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 31 H 0.07 -0.15 8.14 -51.92 -0.42 -0.57 16 32 H 0.39 -1.45 7.73 -40.82 -0.32 -1.77 16 33 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 34 H 0.08 0.25 6.48 -51.93 -0.34 -0.08 16 35 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 36 H 0.15 -0.26 6.17 -52.49 -0.32 -0.58 16 37 H 0.11 -0.20 7.96 -51.93 -0.41 -0.61 16 38 H 0.38 -1.93 8.70 45.56 0.40 -1.54 16 39 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 40 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 41 H 0.42 -1.39 8.19 -40.82 -0.33 -1.72 16 42 H 0.07 -0.28 8.14 -51.93 -0.42 -0.71 16 43 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 44 H 0.08 -0.07 8.10 -51.93 -0.42 -0.49 16 45 H 0.08 0.00 8.10 -51.93 -0.42 -0.42 16 LS Contribution 369.10 15.07 5.56 5.56 Total: 0.00 -9.05 369.10 -9.25 -18.30 By element: Atomic # 1 Polarization: -6.49 SS G_CDS: -6.83 Total: -13.32 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: -1.39 Total: 1.02 kcal Atomic # 7 Polarization: 1.39 SS G_CDS: -0.31 Total: 1.08 kcal Atomic # 8 Polarization: -4.69 SS G_CDS: -1.08 Total: -5.77 kcal Atomic # 14 Polarization: -1.67 SS G_CDS: -5.19 Total: -6.86 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -9.05 -9.25 -18.30 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_13940406.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.433 kcal (2) G-P(sol) polarization free energy of solvation -9.051 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.484 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.247 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.299 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.731 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds