Wall clock time and date at job start Tue Mar 9 2021 12:52:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34233 * 117.00102 * 2 1 4 4 O 1.20825 * 119.99711 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00160 * 179.97438 * 3 2 1 6 6 H 1.09003 * 109.46807 * 299.99397 * 5 3 2 7 7 C 1.53001 * 109.47135 * 59.99410 * 5 3 2 8 8 C 1.53005 * 109.47165 * 180.02562 * 7 5 3 9 9 C 1.53000 * 109.47027 * 300.00150 * 8 7 5 10 10 H 1.08993 * 109.47266 * 300.00171 * 9 8 7 11 11 N 1.46501 * 109.47383 * 179.97438 * 9 8 7 12 12 C 1.34773 * 119.99557 * 84.99760 * 11 9 8 13 13 O 1.21278 * 120.00306 * 0.02562 * 12 11 9 14 14 C 1.50703 * 119.99605 * 180.02562 * 12 11 9 15 15 O 1.42904 * 109.47031 * 180.02562 * 14 12 11 16 16 C 1.35895 * 117.00128 * 179.97438 * 15 14 12 17 17 C 1.38709 * 120.05826 * 180.02562 * 16 15 14 18 18 C 1.50705 * 120.02672 * 359.96119 * 17 16 15 19 19 O 1.42893 * 109.47388 * 75.01909 * 18 17 16 20 20 Si 1.86297 * 109.47043 * 195.02169 * 18 17 16 21 21 C 1.38164 * 119.94688 * 179.97438 * 17 16 15 22 22 C 1.38245 * 120.05645 * 0.02562 * 21 17 16 23 23 C 1.38290 * 120.10982 * 359.97438 * 22 21 17 24 24 C 1.38126 * 120.05768 * 0.02562 * 23 22 21 25 25 C 1.53009 * 109.47084 * 59.99765 * 9 8 7 26 26 C 1.52997 * 109.47176 * 299.99921 * 25 9 8 27 27 H 1.08999 * 109.46940 * 180.02562 * 1 2 3 28 28 H 1.09001 * 109.47376 * 300.00369 * 1 2 3 29 29 H 1.08997 * 109.46842 * 60.00613 * 1 2 3 30 30 H 1.09000 * 109.47097 * 299.99892 * 7 5 3 31 31 H 1.08995 * 109.47166 * 60.00571 * 7 5 3 32 32 H 1.08997 * 109.47344 * 179.97438 * 8 7 5 33 33 H 1.09003 * 109.46936 * 59.99890 * 8 7 5 34 34 H 0.97002 * 120.00119 * 265.00148 * 11 9 8 35 35 H 1.09000 * 109.47423 * 60.00375 * 14 12 11 36 36 H 1.09002 * 109.47439 * 299.99751 * 14 12 11 37 37 H 1.09006 * 109.46723 * 315.01580 * 18 17 16 38 38 H 0.96704 * 114.00005 * 60.00039 * 19 18 17 39 39 H 1.48500 * 110.00041 * 58.67581 * 20 18 17 40 40 H 1.48496 * 110.00176 * 179.97438 * 20 18 17 41 41 H 1.07997 * 119.97418 * 180.02562 * 21 17 16 42 42 H 1.07995 * 119.94685 * 179.72562 * 22 21 17 43 43 H 1.07995 * 119.97112 * 180.02562 * 23 22 21 44 44 H 1.07998 * 120.03128 * 180.02562 * 24 23 22 45 45 H 1.09001 * 109.46855 * 60.00375 * 25 9 8 46 46 H 1.09003 * 109.47132 * 179.97438 * 25 9 8 47 47 H 1.08997 * 109.47139 * 180.02562 * 26 25 9 48 48 H 1.09003 * 109.47117 * 300.00193 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 1 3.9556 0.7810 0.8909 7 6 4.1139 0.5810 -1.2482 8 6 5.6419 0.6605 -1.2473 9 6 6.0762 2.1275 -1.2472 10 1 5.6872 2.6217 -2.1374 11 7 7.5392 2.2038 -1.2457 12 6 8.2185 2.1369 -2.4078 13 8 7.6188 2.0141 -3.4547 14 6 9.7236 2.2148 -2.4062 15 8 10.2067 2.1226 -3.7480 16 6 11.5531 2.1773 -3.9241 17 6 12.0908 2.0943 -5.2000 18 6 11.1824 1.9424 -6.3928 19 8 10.5498 3.1929 -6.6721 20 14 12.1826 1.4085 -7.8711 21 6 13.4600 2.1507 -5.3764 22 6 14.2940 2.2892 -4.2825 23 6 13.7603 2.3722 -3.0094 24 6 12.3922 2.3163 -2.8277 25 6 5.5285 2.8215 0.0016 26 6 4.0006 2.7420 0.0007 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5139 0.8899 29 1 -0.3633 0.5137 -0.8900 30 1 3.8049 -0.4643 -1.2480 31 1 3.7246 1.0748 -2.1385 32 1 6.0320 0.1657 -2.1367 33 1 6.0309 0.1664 -0.3570 34 1 8.0189 2.3023 -0.4084 35 1 10.1293 1.3929 -1.8164 36 1 10.0379 3.1637 -1.9717 37 1 10.4227 1.1909 -6.1775 38 1 11.1671 3.9097 -6.8730 39 1 12.8711 0.1249 -7.5817 40 1 11.2982 1.2546 -9.0540 41 1 13.8792 2.0865 -6.3696 42 1 15.3641 2.3286 -4.4221 43 1 14.4139 2.4808 -2.1565 44 1 11.9759 2.3816 -1.8334 45 1 5.9176 2.3274 0.8919 46 1 5.8383 3.8666 0.0019 47 1 3.6105 3.2367 0.8901 48 1 3.6116 3.2361 -0.8897 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14475160_2989392.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:47 Heat of formation + Delta-G solvation = -166.692414 kcal Electronic energy + Delta-G solvation = -30630.470660 eV Core-core repulsion = 26231.239568 eV Total energy + Delta-G solvation = -4399.231092 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.91556 -41.58686 -40.80546 -39.21464 -38.38045 -37.57295 -37.46892 -35.44650 -32.74823 -31.98695 -31.81735 -31.00493 -29.28559 -28.33037 -26.66939 -24.88240 -23.87828 -23.43224 -22.60074 -22.01091 -21.61999 -20.84578 -19.46737 -18.71110 -18.43118 -17.99969 -17.84734 -17.52033 -17.41650 -17.25320 -16.83499 -16.53863 -15.99346 -15.77566 -15.53834 -15.22299 -15.10704 -14.99405 -14.96238 -14.89494 -14.29726 -14.21651 -14.01528 -13.78033 -13.76665 -13.43145 -13.33596 -13.04541 -13.00291 -12.73260 -12.44296 -12.34982 -12.23435 -12.17950 -12.06758 -11.88832 -11.76113 -11.62095 -11.51727 -11.39697 -10.97425 -10.37838 -10.19410 -9.94250 -9.19946 -5.05670 0.26135 0.43704 1.05764 1.28708 1.42311 1.47458 1.61883 1.69410 1.95325 2.58952 2.73212 3.42927 3.47055 3.55354 3.57148 3.67458 3.77011 3.88122 3.91163 3.98697 4.01094 4.08062 4.14468 4.15322 4.23777 4.24909 4.26413 4.29157 4.33412 4.38002 4.38950 4.54294 4.57538 4.65068 4.67103 4.74500 4.88845 4.99578 5.00377 5.04109 5.06762 5.20695 5.23651 5.30562 5.31913 5.40172 5.42162 5.55273 5.78936 6.29080 6.47520 6.61562 6.81543 7.12630 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.461 3.539 4 O -0.540 6.540 5 C -0.074 4.074 6 H 0.141 0.859 7 C -0.104 4.104 8 C -0.120 4.120 9 C 0.143 3.857 10 H 0.059 0.941 11 N -0.704 5.704 12 C 0.511 3.489 13 O -0.571 6.571 14 C 0.037 3.963 15 O -0.316 6.316 16 C 0.125 3.875 17 C -0.172 4.172 18 C -0.074 4.074 19 O -0.557 6.557 20 Si 0.795 3.205 21 C -0.079 4.079 22 C -0.154 4.154 23 C -0.076 4.076 24 C -0.213 4.213 25 C -0.112 4.112 26 C -0.100 4.100 27 H 0.129 0.871 28 H 0.063 0.937 29 H 0.057 0.943 30 H 0.087 0.913 31 H 0.053 0.947 32 H 0.051 0.949 33 H 0.096 0.904 34 H 0.422 0.578 35 H 0.123 0.877 36 H 0.122 0.878 37 H 0.078 0.922 38 H 0.391 0.609 39 H -0.281 1.281 40 H -0.304 1.304 41 H 0.157 0.843 42 H 0.154 0.846 43 H 0.154 0.846 44 H 0.154 0.846 45 H 0.104 0.896 46 H 0.085 0.915 47 H 0.082 0.918 48 H 0.055 0.945 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.804 -0.160 7.753 11.002 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.306 3.694 4 O -0.430 6.430 5 C -0.093 4.093 6 H 0.159 0.841 7 C -0.142 4.142 8 C -0.159 4.159 9 C 0.038 3.962 10 H 0.077 0.923 11 N -0.358 5.358 12 C 0.297 3.703 13 O -0.449 6.449 14 C -0.041 4.041 15 O -0.229 6.229 16 C 0.079 3.921 17 C -0.173 4.173 18 C -0.182 4.182 19 O -0.365 6.365 20 Si 0.700 3.300 21 C -0.096 4.096 22 C -0.172 4.172 23 C -0.094 4.094 24 C -0.232 4.232 25 C -0.149 4.149 26 C -0.138 4.138 27 H 0.147 0.853 28 H 0.081 0.919 29 H 0.076 0.924 30 H 0.106 0.894 31 H 0.071 0.929 32 H 0.069 0.931 33 H 0.115 0.885 34 H 0.261 0.739 35 H 0.140 0.860 36 H 0.140 0.860 37 H 0.096 0.904 38 H 0.240 0.760 39 H -0.208 1.208 40 H -0.233 1.233 41 H 0.174 0.826 42 H 0.172 0.828 43 H 0.172 0.828 44 H 0.171 0.829 45 H 0.123 0.877 46 H 0.103 0.897 47 H 0.101 0.899 48 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 6.574 -0.936 6.388 9.214 hybrid contribution -1.134 -0.079 0.675 1.321 sum 5.440 -1.014 7.063 8.973 Atomic orbital electron populations 1.23516 0.75150 1.05600 1.02360 1.86507 1.24674 1.33161 1.83553 1.24399 0.93099 0.80984 0.70959 1.90673 1.68172 1.37465 1.46708 1.21255 0.85003 0.99856 1.03143 0.84116 1.21432 0.95596 1.01667 0.95516 1.21849 0.94576 0.96167 1.03305 1.21036 0.78979 0.96418 0.99755 0.92261 1.45697 1.07208 1.74112 1.08745 1.20565 0.89777 0.75873 0.84038 1.90782 1.71211 1.49549 1.33396 1.22716 0.91065 1.06395 0.83938 1.86190 1.19959 1.88111 1.28610 1.19119 0.81827 0.96552 0.94554 1.19848 0.95066 1.09288 0.93114 1.25188 0.99957 0.89869 1.03176 1.86543 1.37781 1.20030 1.92137 0.94043 0.80195 0.82839 0.72951 1.21109 0.90603 0.97333 1.00580 1.21454 1.01425 1.02274 0.92044 1.21417 0.94215 0.95216 0.98538 1.21591 0.94945 1.08333 0.98301 1.21742 0.93883 1.02163 0.97153 1.21374 0.95768 0.93184 1.03522 0.85293 0.91868 0.92414 0.89412 0.92856 0.93057 0.88523 0.73922 0.85952 0.86046 0.90397 0.76022 1.20769 1.23303 0.82610 0.82794 0.82838 0.82853 0.87735 0.89650 0.89939 0.92657 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 113.37 1.20 1.19 16 2 O -0.36 -1.25 10.47 -51.45 -0.54 -1.79 16 3 C 0.46 2.18 7.26 71.23 0.52 2.70 16 4 O -0.54 -6.16 15.73 21.97 0.35 -5.82 16 5 C -0.07 0.16 2.63 -11.54 -0.03 0.13 16 6 H 0.14 -1.09 8.14 -2.39 -0.02 -1.11 16 7 C -0.10 0.11 5.14 30.60 0.16 0.27 16 8 C -0.12 0.24 5.50 30.60 0.17 0.41 16 9 C 0.14 -0.25 2.45 44.99 0.11 -0.14 16 10 H 0.06 0.34 7.58 -2.39 -0.02 0.32 16 11 N -0.70 2.92 5.08 -442.53 -2.25 0.68 16 12 C 0.51 2.20 7.87 87.66 0.69 2.89 16 13 O -0.57 -9.72 16.16 16.01 0.26 -9.46 16 14 C 0.04 -0.04 5.22 71.24 0.37 0.33 16 15 O -0.32 -2.78 9.00 -73.33 -0.66 -3.44 16 16 C 0.12 0.63 6.66 22.51 0.15 0.78 16 17 C -0.17 -0.77 5.27 -19.77 -0.10 -0.88 16 18 C -0.07 -0.53 2.38 71.24 0.17 -0.36 16 19 O -0.56 -4.97 12.88 -148.98 -1.92 -6.89 16 20 Si 0.79 1.42 29.92 68.60 2.05 3.47 16 21 C -0.08 0.11 8.66 22.25 0.19 0.30 16 22 C -0.15 0.58 10.04 22.28 0.22 0.81 16 23 C -0.08 0.30 10.04 22.26 0.22 0.53 16 24 C -0.21 0.36 9.04 22.37 0.20 0.56 16 25 C -0.11 0.78 5.39 30.60 0.16 0.95 16 26 C -0.10 0.22 4.50 30.59 0.14 0.36 16 27 H 0.13 -0.74 8.14 -2.39 -0.02 -0.76 16 28 H 0.06 0.01 8.13 -2.39 -0.02 -0.01 16 29 H 0.06 0.07 8.13 -2.39 -0.02 0.05 16 30 H 0.09 -0.16 8.11 -2.39 -0.02 -0.18 16 31 H 0.05 0.16 8.14 -2.39 -0.02 0.14 16 32 H 0.05 0.19 8.14 -2.39 -0.02 0.18 16 33 H 0.10 -0.67 8.14 -2.39 -0.02 -0.69 16 34 H 0.42 -5.34 8.60 -92.71 -0.80 -6.14 16 35 H 0.12 -0.96 7.66 -2.39 -0.02 -0.98 16 36 H 0.12 -0.90 7.66 -2.39 -0.02 -0.91 16 37 H 0.08 1.03 7.83 -2.38 -0.02 1.02 16 38 H 0.39 -0.44 8.70 -74.05 -0.64 -1.09 16 39 H -0.28 -1.55 7.11 99.48 0.71 -0.84 16 40 H -0.30 -3.01 7.11 99.48 0.71 -2.30 16 41 H 0.16 -1.06 5.13 -2.91 -0.01 -1.08 16 42 H 0.15 -1.37 8.06 -2.91 -0.02 -1.39 16 43 H 0.15 -1.44 8.06 -2.91 -0.02 -1.46 16 44 H 0.15 -1.21 6.30 -2.91 -0.02 -1.22 16 45 H 0.10 -1.29 8.14 -2.39 -0.02 -1.31 16 46 H 0.08 -0.63 8.14 -2.39 -0.02 -0.65 16 47 H 0.08 -0.17 8.10 -2.39 -0.02 -0.19 16 48 H 0.05 0.14 8.10 -2.39 -0.02 0.12 16 Total: 0.00 -34.34 395.19 1.42 -32.93 By element: Atomic # 1 Polarization: -20.08 SS G_CDS: -0.41 Total: -20.50 kcal Atomic # 6 Polarization: 6.28 SS G_CDS: 4.54 Total: 10.82 kcal Atomic # 7 Polarization: 2.92 SS G_CDS: -2.25 Total: 0.68 kcal Atomic # 8 Polarization: -24.88 SS G_CDS: -2.51 Total: -27.39 kcal Atomic # 14 Polarization: 1.42 SS G_CDS: 2.05 Total: 3.47 kcal Total: -34.34 1.42 -32.93 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_2989392.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -133.767 kcal (2) G-P(sol) polarization free energy of solvation -34.344 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -168.111 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.419 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.925 kcal (6) G-S(sol) free energy of system = (1) + (5) -166.692 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds