Wall clock time and date at job start Tue Mar 9 2021 12:52:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34230 * 116.99997 * 2 1 4 4 O 1.20827 * 119.99809 * 0.02562 * 3 2 1 5 5 C 1.50695 * 120.00111 * 180.02562 * 3 2 1 6 6 H 1.09001 * 109.47517 * 300.00692 * 5 3 2 7 7 C 1.53009 * 109.47044 * 60.00573 * 5 3 2 8 8 C 1.53002 * 109.47090 * 179.97438 * 7 5 3 9 9 C 1.52996 * 109.47141 * 300.00105 * 8 7 5 10 10 H 1.09001 * 109.47066 * 300.00262 * 9 8 7 11 11 N 1.46496 * 109.47084 * 180.02562 * 9 8 7 12 12 C 1.34777 * 120.00271 * 84.99619 * 11 9 8 13 13 O 1.21278 * 119.99854 * 0.02562 * 12 11 9 14 14 C 1.50703 * 120.00161 * 180.02562 * 12 11 9 15 15 O 1.42898 * 109.47171 * 180.02562 * 14 12 11 16 16 C 1.35900 * 117.00172 * 179.97438 * 15 14 12 17 17 C 1.38732 * 120.05496 * 359.72626 * 16 15 14 18 18 C 1.38140 * 119.94547 * 179.69745 * 17 16 15 19 19 C 1.38274 * 120.05404 * 0.59676 * 18 17 16 20 20 C 1.50699 * 119.94431 * 179.70091 * 19 18 17 21 21 O 1.42900 * 109.47093 * 119.97803 * 20 19 18 22 22 Si 1.86301 * 109.47124 * 359.97438 * 20 19 18 23 23 C 1.38264 * 120.10832 * 359.67851 * 19 18 17 24 24 C 1.38142 * 120.05865 * 0.02562 * 23 19 18 25 25 C 1.53002 * 109.47405 * 60.00131 * 9 8 7 26 26 C 1.52998 * 109.47321 * 180.02562 * 5 3 2 27 27 H 1.09003 * 109.46890 * 299.99232 * 1 2 3 28 28 H 1.08992 * 109.47850 * 59.98957 * 1 2 3 29 29 H 1.09004 * 109.47162 * 179.97438 * 1 2 3 30 30 H 1.09004 * 109.46811 * 300.00247 * 7 5 3 31 31 H 1.09001 * 109.46866 * 59.99720 * 7 5 3 32 32 H 1.09002 * 109.46730 * 180.02562 * 8 7 5 33 33 H 1.08999 * 109.46674 * 60.00484 * 8 7 5 34 34 H 0.97005 * 120.00266 * 265.00202 * 11 9 8 35 35 H 1.09002 * 109.47152 * 60.00245 * 14 12 11 36 36 H 1.09001 * 109.46980 * 300.00345 * 14 12 11 37 37 H 1.08003 * 120.02290 * 359.97438 * 17 16 15 38 38 H 1.07994 * 119.97919 * 180.31835 * 18 17 16 39 39 H 1.09003 * 109.46530 * 239.97868 * 20 19 18 40 40 H 0.96698 * 114.00095 * 179.97438 * 21 20 19 41 41 H 1.48499 * 109.99963 * 60.00420 * 22 20 19 42 42 H 1.48497 * 109.99715 * 181.32128 * 22 20 19 43 43 H 1.08009 * 119.97297 * 180.02562 * 23 19 18 44 44 H 1.08004 * 120.03048 * 180.02562 * 24 23 19 45 45 H 1.08997 * 109.46609 * 59.99617 * 25 9 8 46 46 H 1.09002 * 109.47469 * 179.97438 * 25 9 8 47 47 H 1.09002 * 109.46949 * 60.00520 * 26 5 3 48 48 H 1.08997 * 109.47585 * 300.00655 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 3.9564 0.7805 0.8891 7 6 4.1128 0.5817 -1.2503 8 6 5.6407 0.6623 -1.2513 9 6 6.0740 2.1297 -1.2513 10 1 5.6834 2.6238 -2.1409 11 7 7.5369 2.2069 -1.2528 12 6 8.2140 2.1411 -2.4162 13 8 7.6122 2.0184 -3.4620 14 6 9.7190 2.2199 -2.4177 15 8 10.1995 2.1288 -3.7604 16 6 11.5455 2.1845 -3.9392 17 6 12.3863 2.3297 -2.8453 18 6 13.7545 2.3798 -3.0290 19 6 14.2856 2.2977 -4.3031 20 6 15.7782 2.3593 -4.5013 21 8 16.2256 1.1557 -5.1284 22 14 16.6169 2.5472 -2.8484 23 6 13.4494 2.1587 -5.3954 24 6 12.0808 2.1020 -5.2164 25 6 5.5275 2.8229 -0.0016 26 6 4.0001 2.7421 0.0002 27 1 -0.3633 0.5137 0.8901 28 1 -0.3634 0.5139 -0.8898 29 1 -0.3634 -1.0277 -0.0005 30 1 3.8037 -0.4636 -1.2505 31 1 3.7227 1.0761 -2.1400 32 1 6.0300 0.1689 -2.1418 33 1 6.0311 0.1682 -0.3616 34 1 8.0183 2.3053 -0.4164 35 1 10.1265 1.3980 -1.8291 36 1 10.0335 3.1688 -1.9832 37 1 11.9716 2.3990 -1.8505 38 1 14.4098 2.4876 -2.1774 39 1 16.0258 3.2122 -5.1334 40 1 17.1789 1.1260 -5.2875 41 1 16.2872 1.3907 -1.9772 42 1 18.0874 2.6413 -3.0328 43 1 13.8666 2.0943 -6.3896 44 1 11.4281 1.9929 -6.0700 45 1 5.9179 2.3287 0.8880 46 1 5.8365 3.8682 -0.0014 47 1 3.6108 3.2356 0.8907 48 1 3.6099 3.2369 -0.8892 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475160_2989410.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:51 Heat of formation + Delta-G solvation = -164.315549 kcal Electronic energy + Delta-G solvation = -29849.764116 eV Core-core repulsion = 25450.636093 eV Total energy + Delta-G solvation = -4399.128023 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -41.83145 -41.47911 -40.72429 -39.32736 -38.65856 -37.42570 -37.26587 -35.38768 -32.53128 -32.04361 -31.84434 -31.55626 -29.45288 -28.39879 -26.20410 -24.84790 -23.96202 -23.86649 -22.32836 -21.91240 -21.61367 -20.88062 -19.46717 -18.63750 -18.54736 -18.37796 -17.76497 -17.50043 -17.34799 -17.32564 -16.87251 -16.73383 -15.91516 -15.71123 -15.56723 -15.30517 -15.20417 -14.98403 -14.90168 -14.43807 -14.25092 -14.14159 -13.98113 -13.92390 -13.79075 -13.51023 -13.41910 -13.35400 -13.06955 -12.72119 -12.50244 -12.46744 -12.33872 -12.17584 -11.90313 -11.79141 -11.72038 -11.69160 -11.50910 -11.30745 -10.86374 -10.50308 -10.20012 -9.99955 -9.17226 -4.99970 0.32001 0.34274 1.20015 1.26559 1.41588 1.47548 1.56645 1.71085 1.93100 2.52983 2.65047 3.32764 3.38738 3.39648 3.49337 3.62817 3.73223 3.80114 3.82101 3.85573 3.87070 3.94027 3.96299 4.09718 4.15409 4.18082 4.20953 4.25048 4.27978 4.28845 4.38073 4.48303 4.50048 4.58133 4.64631 4.67043 4.82113 4.87635 4.97204 4.98299 4.99840 5.11447 5.16330 5.18852 5.27924 5.33613 5.42007 5.54974 5.70359 6.22655 6.36971 6.43683 6.74491 7.07687 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.463 3.537 4 O -0.505 6.505 5 C -0.081 4.081 6 H 0.112 0.888 7 C -0.109 4.109 8 C -0.128 4.128 9 C 0.143 3.857 10 H 0.093 0.907 11 N -0.725 5.725 12 C 0.517 3.483 13 O -0.510 6.510 14 C 0.039 3.961 15 O -0.288 6.288 16 C 0.133 3.867 17 C -0.206 4.206 18 C -0.073 4.073 19 C -0.111 4.111 20 C -0.071 4.071 21 O -0.537 6.537 22 Si 0.679 3.321 23 C -0.050 4.050 24 C -0.145 4.145 25 C -0.125 4.125 26 C -0.101 4.101 27 H 0.064 0.936 28 H 0.064 0.936 29 H 0.103 0.897 30 H 0.083 0.917 31 H 0.073 0.927 32 H 0.077 0.923 33 H 0.071 0.929 34 H 0.402 0.598 35 H 0.095 0.905 36 H 0.096 0.904 37 H 0.133 0.867 38 H 0.130 0.870 39 H 0.076 0.924 40 H 0.379 0.621 41 H -0.256 1.256 42 H -0.261 1.261 43 H 0.133 0.867 44 H 0.136 0.864 45 H 0.074 0.926 46 H 0.079 0.921 47 H 0.081 0.919 48 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.441 1.224 5.464 6.109 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.392 6.392 5 C -0.100 4.100 6 H 0.130 0.870 7 C -0.147 4.147 8 C -0.167 4.167 9 C 0.040 3.960 10 H 0.112 0.888 11 N -0.378 5.378 12 C 0.301 3.699 13 O -0.384 6.384 14 C -0.039 4.039 15 O -0.200 6.200 16 C 0.088 3.912 17 C -0.224 4.224 18 C -0.091 4.091 19 C -0.111 4.111 20 C -0.181 4.181 21 O -0.344 6.344 22 Si 0.581 3.419 23 C -0.068 4.068 24 C -0.164 4.164 25 C -0.163 4.163 26 C -0.139 4.139 27 H 0.082 0.918 28 H 0.083 0.917 29 H 0.121 0.879 30 H 0.102 0.898 31 H 0.092 0.908 32 H 0.095 0.905 33 H 0.089 0.911 34 H 0.237 0.763 35 H 0.113 0.887 36 H 0.114 0.886 37 H 0.150 0.850 38 H 0.148 0.852 39 H 0.094 0.906 40 H 0.227 0.773 41 H -0.180 1.180 42 H -0.187 1.187 43 H 0.151 0.849 44 H 0.154 0.846 45 H 0.092 0.908 46 H 0.098 0.902 47 H 0.099 0.901 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 1.541 0.930 5.133 5.439 hybrid contribution 0.735 -0.589 -0.111 0.948 sum 2.276 0.341 5.022 5.524 Atomic orbital electron populations 1.23316 0.75949 1.03988 1.02716 1.86504 1.23720 1.33366 1.83890 1.23787 0.92016 0.81417 0.72182 1.90693 1.67197 1.36378 1.44899 1.21173 0.87022 0.99502 1.02285 0.87027 1.21501 0.95397 1.01679 0.96098 1.21932 0.94998 0.96344 1.03431 1.21092 0.78589 0.96385 0.99981 0.88846 1.45877 1.07533 1.75719 1.08686 1.20045 0.88708 0.76910 0.84230 1.90791 1.69814 1.46574 1.31201 1.22482 0.92793 1.04022 0.84652 1.86171 1.19173 1.87995 1.26691 1.19059 0.81755 0.95991 0.94403 1.21133 0.93947 1.09129 0.98208 1.20711 0.94594 0.97767 0.96005 1.19169 0.93461 1.04969 0.93498 1.24734 0.95770 0.89443 1.08148 1.86594 1.28220 1.38713 1.80859 0.95198 0.79692 0.89034 0.78013 1.20830 0.91641 0.95234 0.99086 1.20511 0.95186 1.05550 0.95138 1.21805 0.95475 1.01682 0.97309 1.21386 0.94514 0.93477 1.04558 0.91767 0.91741 0.87859 0.89834 0.90848 0.90466 0.91057 0.76333 0.88734 0.88630 0.84962 0.85250 0.90609 0.77285 1.18045 1.18671 0.84900 0.84609 0.90761 0.90226 0.90084 0.90364 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.45 10.47 -39.26 -0.41 -0.86 16 3 C 0.46 0.75 7.25 36.00 0.26 1.01 16 4 O -0.50 -2.31 15.73 -18.75 -0.29 -2.60 16 5 C -0.08 0.11 2.63 -91.77 -0.24 -0.13 16 6 H 0.11 -0.35 8.14 -51.93 -0.42 -0.77 16 7 C -0.11 0.16 5.14 -26.73 -0.14 0.02 16 8 C -0.13 0.22 5.49 -26.73 -0.15 0.07 16 9 C 0.14 -0.26 2.45 -67.93 -0.17 -0.42 16 10 H 0.09 0.05 7.58 -51.93 -0.39 -0.34 16 11 N -0.72 1.89 5.08 -53.81 -0.27 1.62 16 12 C 0.52 0.37 7.87 -10.98 -0.09 0.28 16 13 O -0.51 -2.95 16.16 -14.35 -0.23 -3.18 16 14 C 0.04 -0.05 5.22 36.01 0.19 0.13 16 15 O -0.29 -0.78 9.67 -39.34 -0.38 -1.16 16 16 C 0.13 0.26 6.69 -39.22 -0.26 0.00 16 17 C -0.21 0.01 9.04 -39.43 -0.36 -0.34 16 18 C -0.07 -0.01 8.66 -39.60 -0.34 -0.36 16 19 C -0.11 -0.14 5.42 -104.60 -0.57 -0.70 16 20 C -0.07 0.01 2.81 36.01 0.10 0.11 16 21 O -0.54 -0.66 12.74 -35.23 -0.45 -1.10 16 22 Si 0.68 -0.76 29.78 -169.99 -5.06 -5.82 16 23 C -0.05 -0.08 9.60 -39.61 -0.38 -0.46 16 24 C -0.15 -0.32 9.99 -39.43 -0.39 -0.71 16 25 C -0.12 0.44 5.39 -26.75 -0.14 0.29 16 26 C -0.10 0.17 4.49 -26.76 -0.12 0.05 16 27 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 28 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 29 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 30 H 0.08 -0.13 8.11 -51.93 -0.42 -0.55 16 31 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 32 H 0.08 0.03 8.14 -51.93 -0.42 -0.40 16 33 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 34 H 0.40 -2.37 8.60 -40.82 -0.35 -2.72 16 35 H 0.09 -0.36 7.68 -51.93 -0.40 -0.76 16 36 H 0.10 -0.39 7.65 -51.93 -0.40 -0.78 16 37 H 0.13 -0.41 6.30 -52.48 -0.33 -0.74 16 38 H 0.13 -0.25 4.87 -52.49 -0.26 -0.51 16 39 H 0.08 -0.13 7.96 -51.93 -0.41 -0.55 16 40 H 0.38 -1.04 8.74 45.56 0.40 -0.64 16 41 H -0.26 -0.51 7.11 56.52 0.40 -0.10 16 42 H -0.26 -0.26 7.11 56.52 0.40 0.15 16 43 H 0.13 0.08 8.06 -52.48 -0.42 -0.34 16 44 H 0.14 0.21 8.06 -52.48 -0.42 -0.21 16 45 H 0.07 -0.36 8.14 -51.93 -0.42 -0.78 16 46 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 47 H 0.08 -0.11 8.10 -51.93 -0.42 -0.53 16 48 H 0.08 -0.02 8.10 -51.93 -0.42 -0.45 16 LS Contribution 395.63 15.07 5.96 5.96 Total: 0.00 -11.57 395.63 -10.12 -21.69 By element: Atomic # 1 Polarization: -7.18 SS G_CDS: -7.25 Total: -14.44 kcal Atomic # 6 Polarization: 1.63 SS G_CDS: -1.73 Total: -0.10 kcal Atomic # 7 Polarization: 1.89 SS G_CDS: -0.27 Total: 1.62 kcal Atomic # 8 Polarization: -7.14 SS G_CDS: -1.77 Total: -8.91 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: -5.06 Total: -5.82 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -11.57 -10.12 -21.69 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_2989410.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -142.623 kcal (2) G-P(sol) polarization free energy of solvation -11.570 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -154.193 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.122 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.692 kcal (6) G-S(sol) free energy of system = (1) + (5) -164.316 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds