Wall clock time and date at job start Tue Mar 9 2021 12:52:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34230 * 116.99997 * 2 1 4 4 O 1.20827 * 119.99809 * 0.02562 * 3 2 1 5 5 C 1.50695 * 120.00111 * 180.02562 * 3 2 1 6 6 H 1.09001 * 109.47517 * 300.00692 * 5 3 2 7 7 C 1.53009 * 109.47044 * 60.00573 * 5 3 2 8 8 C 1.53002 * 109.47090 * 179.97438 * 7 5 3 9 9 C 1.52996 * 109.47141 * 300.00105 * 8 7 5 10 10 H 1.09001 * 109.47066 * 300.00262 * 9 8 7 11 11 N 1.46496 * 109.47084 * 180.02562 * 9 8 7 12 12 C 1.34777 * 120.00271 * 84.99619 * 11 9 8 13 13 O 1.21278 * 119.99854 * 0.02562 * 12 11 9 14 14 C 1.50703 * 120.00161 * 180.02562 * 12 11 9 15 15 O 1.42898 * 109.47171 * 180.02562 * 14 12 11 16 16 C 1.35900 * 117.00172 * 179.97438 * 15 14 12 17 17 C 1.38732 * 120.05496 * 359.72626 * 16 15 14 18 18 C 1.38140 * 119.94547 * 179.69745 * 17 16 15 19 19 C 1.38274 * 120.05404 * 0.59676 * 18 17 16 20 20 C 1.50699 * 119.94431 * 179.70091 * 19 18 17 21 21 O 1.42900 * 109.47093 * 119.97803 * 20 19 18 22 22 Si 1.86301 * 109.47124 * 359.97438 * 20 19 18 23 23 C 1.38264 * 120.10832 * 359.67851 * 19 18 17 24 24 C 1.38142 * 120.05865 * 0.02562 * 23 19 18 25 25 C 1.53002 * 109.47405 * 60.00131 * 9 8 7 26 26 C 1.52998 * 109.47321 * 180.02562 * 5 3 2 27 27 H 1.09003 * 109.46890 * 299.99232 * 1 2 3 28 28 H 1.08992 * 109.47850 * 59.98957 * 1 2 3 29 29 H 1.09004 * 109.47162 * 179.97438 * 1 2 3 30 30 H 1.09004 * 109.46811 * 300.00247 * 7 5 3 31 31 H 1.09001 * 109.46866 * 59.99720 * 7 5 3 32 32 H 1.09002 * 109.46730 * 180.02562 * 8 7 5 33 33 H 1.08999 * 109.46674 * 60.00484 * 8 7 5 34 34 H 0.97005 * 120.00266 * 265.00202 * 11 9 8 35 35 H 1.09002 * 109.47152 * 60.00245 * 14 12 11 36 36 H 1.09001 * 109.46980 * 300.00345 * 14 12 11 37 37 H 1.08003 * 120.02290 * 359.97438 * 17 16 15 38 38 H 1.07994 * 119.97919 * 180.31835 * 18 17 16 39 39 H 1.09003 * 109.46530 * 239.97868 * 20 19 18 40 40 H 0.96698 * 114.00095 * 179.97438 * 21 20 19 41 41 H 1.48499 * 109.99963 * 60.00420 * 22 20 19 42 42 H 1.48497 * 109.99715 * 181.32128 * 22 20 19 43 43 H 1.08009 * 119.97297 * 180.02562 * 23 19 18 44 44 H 1.08004 * 120.03048 * 180.02562 * 24 23 19 45 45 H 1.08997 * 109.46609 * 59.99617 * 25 9 8 46 46 H 1.09002 * 109.47469 * 179.97438 * 25 9 8 47 47 H 1.09002 * 109.46949 * 60.00520 * 26 5 3 48 48 H 1.08997 * 109.47585 * 300.00655 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 3.9564 0.7805 0.8891 7 6 4.1128 0.5817 -1.2503 8 6 5.6407 0.6623 -1.2513 9 6 6.0740 2.1297 -1.2513 10 1 5.6834 2.6238 -2.1409 11 7 7.5369 2.2069 -1.2528 12 6 8.2140 2.1411 -2.4162 13 8 7.6122 2.0184 -3.4620 14 6 9.7190 2.2199 -2.4177 15 8 10.1995 2.1288 -3.7604 16 6 11.5455 2.1845 -3.9392 17 6 12.3863 2.3297 -2.8453 18 6 13.7545 2.3798 -3.0290 19 6 14.2856 2.2977 -4.3031 20 6 15.7782 2.3593 -4.5013 21 8 16.2256 1.1557 -5.1284 22 14 16.6169 2.5472 -2.8484 23 6 13.4494 2.1587 -5.3954 24 6 12.0808 2.1020 -5.2164 25 6 5.5275 2.8229 -0.0016 26 6 4.0001 2.7421 0.0002 27 1 -0.3633 0.5137 0.8901 28 1 -0.3634 0.5139 -0.8898 29 1 -0.3634 -1.0277 -0.0005 30 1 3.8037 -0.4636 -1.2505 31 1 3.7227 1.0761 -2.1400 32 1 6.0300 0.1689 -2.1418 33 1 6.0311 0.1682 -0.3616 34 1 8.0183 2.3053 -0.4164 35 1 10.1265 1.3980 -1.8291 36 1 10.0335 3.1688 -1.9832 37 1 11.9716 2.3990 -1.8505 38 1 14.4098 2.4876 -2.1774 39 1 16.0258 3.2122 -5.1334 40 1 17.1789 1.1260 -5.2875 41 1 16.2872 1.3907 -1.9772 42 1 18.0874 2.6413 -3.0328 43 1 13.8666 2.0943 -6.3896 44 1 11.4281 1.9929 -6.0700 45 1 5.9179 2.3287 0.8880 46 1 5.8365 3.8682 -0.0014 47 1 3.6108 3.2356 0.8907 48 1 3.6099 3.2369 -0.8892 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14475160_2989410.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:50 Heat of formation + Delta-G solvation = -165.599616 kcal Electronic energy + Delta-G solvation = -29849.819797 eV Core-core repulsion = 25450.636093 eV Total energy + Delta-G solvation = -4399.183704 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -41.88010 -41.51280 -40.74030 -39.30305 -38.68227 -37.55476 -37.29505 -35.39845 -32.53045 -31.91580 -31.83372 -31.52919 -29.39576 -28.34932 -26.19009 -24.81714 -23.87834 -23.83323 -22.34552 -21.89983 -21.57881 -20.81723 -19.45194 -18.69307 -18.56273 -18.33624 -17.82027 -17.50485 -17.37288 -17.32694 -16.83608 -16.73097 -15.87174 -15.67345 -15.56709 -15.28449 -15.14953 -14.96534 -14.90136 -14.46058 -14.26279 -14.11544 -13.99645 -13.93093 -13.73679 -13.50427 -13.38076 -13.29312 -13.01802 -12.69600 -12.47206 -12.39645 -12.19630 -12.14539 -11.89130 -11.86331 -11.73877 -11.57803 -11.48248 -11.35370 -10.93060 -10.46968 -10.14191 -10.02395 -9.19984 -4.90706 0.28231 0.32465 1.08549 1.33624 1.47615 1.49512 1.63198 1.72174 1.97727 2.60493 2.63864 3.41754 3.47200 3.51759 3.60694 3.70215 3.82081 3.84264 3.92596 3.99927 4.06301 4.07063 4.14951 4.18311 4.26373 4.27302 4.30837 4.31186 4.33283 4.43340 4.43561 4.46281 4.62005 4.67489 4.70132 4.78776 4.93239 4.98091 5.04994 5.08577 5.11105 5.17338 5.25313 5.25976 5.28190 5.34972 5.46820 5.51751 5.70252 6.28665 6.51316 6.61198 6.64243 7.17561 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.461 3.539 4 O -0.541 6.541 5 C -0.074 4.074 6 H 0.140 0.860 7 C -0.104 4.104 8 C -0.121 4.121 9 C 0.143 3.857 10 H 0.061 0.939 11 N -0.703 5.703 12 C 0.513 3.487 13 O -0.573 6.573 14 C 0.035 3.965 15 O -0.320 6.320 16 C 0.121 3.879 17 C -0.198 4.198 18 C -0.078 4.078 19 C -0.125 4.125 20 C -0.086 4.086 21 O -0.561 6.561 22 Si 0.769 3.231 23 C -0.062 4.062 24 C -0.167 4.167 25 C -0.112 4.112 26 C -0.100 4.100 27 H 0.062 0.938 28 H 0.057 0.943 29 H 0.129 0.871 30 H 0.086 0.914 31 H 0.054 0.946 32 H 0.053 0.947 33 H 0.095 0.905 34 H 0.423 0.577 35 H 0.126 0.874 36 H 0.129 0.871 37 H 0.168 0.832 38 H 0.152 0.848 39 H 0.092 0.908 40 H 0.394 0.606 41 H -0.295 1.295 42 H -0.290 1.290 43 H 0.133 0.867 44 H 0.127 0.873 45 H 0.103 0.897 46 H 0.086 0.914 47 H 0.081 0.919 48 H 0.055 0.945 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.824 1.255 8.243 9.174 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.305 3.695 4 O -0.431 6.431 5 C -0.093 4.093 6 H 0.158 0.842 7 C -0.142 4.142 8 C -0.160 4.160 9 C 0.038 3.962 10 H 0.079 0.921 11 N -0.357 5.357 12 C 0.299 3.701 13 O -0.452 6.452 14 C -0.043 4.043 15 O -0.233 6.233 16 C 0.075 3.925 17 C -0.216 4.216 18 C -0.095 4.095 19 C -0.125 4.125 20 C -0.194 4.194 21 O -0.371 6.371 22 Si 0.674 3.326 23 C -0.080 4.080 24 C -0.186 4.186 25 C -0.150 4.150 26 C -0.139 4.139 27 H 0.081 0.919 28 H 0.076 0.924 29 H 0.147 0.853 30 H 0.105 0.895 31 H 0.072 0.928 32 H 0.071 0.929 33 H 0.114 0.886 34 H 0.262 0.738 35 H 0.143 0.857 36 H 0.147 0.853 37 H 0.186 0.814 38 H 0.169 0.831 39 H 0.109 0.891 40 H 0.244 0.756 41 H -0.223 1.223 42 H -0.217 1.217 43 H 0.151 0.849 44 H 0.145 0.855 45 H 0.122 0.878 46 H 0.104 0.896 47 H 0.099 0.901 48 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges 2.936 0.970 7.944 8.524 hybrid contribution 0.262 -0.646 -0.988 1.209 sum 3.198 0.324 6.956 7.663 Atomic orbital electron populations 1.23511 0.75185 1.05578 1.02348 1.86508 1.24644 1.33203 1.83556 1.24428 0.93148 0.80962 0.70941 1.90674 1.68191 1.37466 1.46729 1.21263 0.84923 0.99918 1.03178 0.84211 1.21437 0.95706 1.01617 0.95462 1.21856 0.94485 0.96255 1.03368 1.21028 0.79056 0.96345 0.99753 0.92051 1.45696 1.07192 1.74020 1.08820 1.20560 0.89773 0.75793 0.84005 1.90770 1.71134 1.49740 1.33516 1.22785 0.90977 1.06965 0.83543 1.86128 1.19631 1.88299 1.29244 1.19188 0.81863 0.96572 0.94837 1.21487 0.93581 1.07439 0.99138 1.21025 0.95194 0.97085 0.96201 1.19461 0.94197 1.04964 0.93903 1.25045 0.95235 0.89534 1.09594 1.86550 1.29784 1.39501 1.81248 0.94222 0.76768 0.86441 0.75121 1.20909 0.91609 0.95909 0.99609 1.20616 0.95533 1.06763 0.95679 1.21730 0.93796 1.02226 0.97205 1.21366 0.95886 0.93118 1.03493 0.91912 0.92393 0.85325 0.89502 0.92763 0.92861 0.88609 0.73844 0.85677 0.85303 0.81420 0.83072 0.89062 0.75602 1.22265 1.21742 0.84895 0.85489 0.87840 0.89556 0.90071 0.92596 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 113.37 1.20 1.18 16 2 O -0.36 -1.02 10.47 -51.42 -0.54 -1.56 16 3 C 0.46 1.83 7.25 71.23 0.52 2.34 16 4 O -0.54 -5.77 15.73 21.96 0.35 -5.42 16 5 C -0.07 0.23 2.63 -11.54 -0.03 0.20 16 6 H 0.14 -1.19 8.14 -2.39 -0.02 -1.21 16 7 C -0.10 0.24 5.14 30.60 0.16 0.40 16 8 C -0.12 0.43 5.49 30.59 0.17 0.59 16 9 C 0.14 -0.51 2.45 44.99 0.11 -0.40 16 10 H 0.06 0.21 7.58 -2.39 -0.02 0.19 16 11 N -0.70 4.46 5.08 -442.54 -2.25 2.21 16 12 C 0.51 0.80 7.87 87.66 0.69 1.49 16 13 O -0.57 -7.96 16.16 16.01 0.26 -7.70 16 14 C 0.03 -0.14 5.22 71.24 0.37 0.23 16 15 O -0.32 -1.92 9.67 -73.39 -0.71 -2.63 16 16 C 0.12 0.50 6.69 22.51 0.15 0.65 16 17 C -0.20 0.35 9.04 22.36 0.20 0.55 16 18 C -0.08 0.08 8.66 22.25 0.19 0.27 16 19 C -0.12 -0.30 5.42 -19.85 -0.11 -0.40 16 20 C -0.09 0.05 2.81 71.24 0.20 0.26 16 21 O -0.56 -1.46 12.74 -148.98 -1.90 -3.36 16 22 Si 0.77 -2.51 29.78 68.60 2.04 -0.47 16 23 C -0.06 -0.29 9.60 22.25 0.21 -0.07 16 24 C -0.17 -1.02 9.99 22.37 0.22 -0.80 16 25 C -0.11 0.94 5.39 30.58 0.16 1.11 16 26 C -0.10 0.33 4.49 30.58 0.14 0.47 16 27 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 28 H 0.06 0.04 8.13 -2.39 -0.02 0.02 16 29 H 0.13 -0.80 8.14 -2.38 -0.02 -0.82 16 30 H 0.09 -0.25 8.11 -2.38 -0.02 -0.27 16 31 H 0.05 0.08 8.14 -2.39 -0.02 0.06 16 32 H 0.05 0.11 8.14 -2.39 -0.02 0.09 16 33 H 0.10 -0.78 8.14 -2.39 -0.02 -0.80 16 34 H 0.42 -6.24 8.60 -92.70 -0.80 -7.04 16 35 H 0.13 -1.30 7.68 -2.39 -0.02 -1.32 16 36 H 0.13 -1.42 7.65 -2.39 -0.02 -1.44 16 37 H 0.17 -1.66 6.30 -2.91 -0.02 -1.68 16 38 H 0.15 -0.93 4.87 -2.91 -0.01 -0.94 16 39 H 0.09 -0.38 7.96 -2.39 -0.02 -0.40 16 40 H 0.39 -2.14 8.74 -74.06 -0.65 -2.79 16 41 H -0.30 -0.99 7.11 99.48 0.71 -0.28 16 42 H -0.29 -0.39 7.11 99.48 0.71 0.31 16 43 H 0.13 0.42 8.06 -2.91 -0.02 0.40 16 44 H 0.13 0.81 8.06 -2.91 -0.02 0.78 16 45 H 0.10 -1.40 8.14 -2.39 -0.02 -1.42 16 46 H 0.09 -0.78 8.14 -2.39 -0.02 -0.80 16 47 H 0.08 -0.24 8.10 -2.39 -0.02 -0.25 16 48 H 0.06 0.07 8.10 -2.39 -0.02 0.05 16 Total: 0.00 -31.81 395.63 1.40 -30.41 By element: Atomic # 1 Polarization: -19.15 SS G_CDS: -0.42 Total: -19.57 kcal Atomic # 6 Polarization: 3.51 SS G_CDS: 4.56 Total: 8.07 kcal Atomic # 7 Polarization: 4.46 SS G_CDS: -2.25 Total: 2.21 kcal Atomic # 8 Polarization: -18.11 SS G_CDS: -2.54 Total: -20.66 kcal Atomic # 14 Polarization: -2.51 SS G_CDS: 2.04 Total: -0.47 kcal Total: -31.81 1.40 -30.41 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_2989410.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -135.186 kcal (2) G-P(sol) polarization free energy of solvation -31.809 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -166.995 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.395 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.414 kcal (6) G-S(sol) free energy of system = (1) + (5) -165.600 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds