Wall clock time and date at job start Tue Mar 9 2021 12:52:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34228 * 117.00171 * 2 1 4 4 O 1.20830 * 119.99496 * 359.97438 * 3 2 1 5 5 C 1.50696 * 120.00409 * 180.02562 * 3 2 1 6 6 H 1.09000 * 109.46647 * 299.99509 * 5 3 2 7 7 C 1.53002 * 109.47306 * 59.99165 * 5 3 2 8 8 C 1.52996 * 109.46972 * 180.02562 * 7 5 3 9 9 C 1.52997 * 109.47165 * 300.00293 * 8 7 5 10 10 H 1.09000 * 109.47140 * 299.99954 * 9 8 7 11 11 N 1.46506 * 109.47277 * 180.02562 * 9 8 7 12 12 C 1.34780 * 120.00088 * 84.99368 * 11 9 8 13 13 O 1.21287 * 120.00032 * 0.02562 * 12 11 9 14 14 C 1.50696 * 120.00373 * 180.02562 * 12 11 9 15 15 C 1.52994 * 109.47408 * 180.02562 * 14 12 11 16 16 O 1.42905 * 109.47169 * 179.97438 * 15 14 12 17 17 C 1.35893 * 116.99730 * 180.02562 * 16 15 14 18 18 C 1.38716 * 120.05355 * 179.73184 * 17 16 15 19 19 C 1.38164 * 119.94443 * 179.76793 * 18 17 16 20 20 C 1.50706 * 119.97448 * 180.23180 * 19 18 17 21 21 O 1.42905 * 109.46689 * 300.25261 * 20 19 18 22 22 Si 1.86295 * 109.47173 * 180.25292 * 20 19 18 23 23 C 1.38246 * 120.05815 * 0.47859 * 19 18 17 24 24 C 1.38294 * 120.10760 * 359.77298 * 23 19 18 25 25 C 1.38125 * 120.05382 * 359.97438 * 24 23 19 26 26 C 1.52999 * 109.47592 * 60.00300 * 9 8 7 27 27 C 1.52997 * 109.47238 * 179.97438 * 5 3 2 28 28 H 1.08999 * 109.47130 * 60.00419 * 1 2 3 29 29 H 1.09000 * 109.47075 * 180.02562 * 1 2 3 30 30 H 1.09005 * 109.47571 * 300.00511 * 1 2 3 31 31 H 1.08992 * 109.46974 * 300.00616 * 7 5 3 32 32 H 1.08996 * 109.46550 * 60.00722 * 7 5 3 33 33 H 1.09000 * 109.47054 * 60.00300 * 8 7 5 34 34 H 1.09001 * 109.46997 * 180.02562 * 8 7 5 35 35 H 0.97000 * 120.00161 * 265.00272 * 11 9 8 36 36 H 1.09002 * 109.47161 * 300.00978 * 14 12 11 37 37 H 1.09007 * 109.46777 * 60.00015 * 14 12 11 38 38 H 1.08994 * 109.47221 * 300.00453 * 15 14 12 39 39 H 1.09007 * 109.46892 * 60.00380 * 15 14 12 40 40 H 1.08001 * 120.02460 * 359.97438 * 18 17 16 41 41 H 1.08997 * 109.47035 * 60.24821 * 20 19 18 42 42 H 0.96696 * 113.99490 * 180.02562 * 21 20 19 43 43 H 1.48498 * 110.00002 * 59.99603 * 22 20 19 44 44 H 1.48505 * 109.99966 * 181.31706 * 22 20 19 45 45 H 1.07996 * 119.94696 * 179.74708 * 23 19 18 46 46 H 1.07998 * 119.97311 * 179.97438 * 24 23 19 47 47 H 1.08001 * 120.02591 * 180.02562 * 25 24 23 48 48 H 1.08993 * 109.47839 * 180.02562 * 26 9 8 49 49 H 1.09000 * 109.47160 * 59.99666 * 26 9 8 50 50 H 1.09001 * 109.46922 * 59.99800 * 27 5 3 51 51 H 1.09000 * 109.47140 * 299.99500 * 27 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 -0.0006 6 1 3.9563 0.7807 0.8892 7 6 4.1129 0.5814 -1.2501 8 6 5.6408 0.6610 -1.2503 9 6 6.0751 2.1281 -1.2499 10 1 5.6854 2.6226 -2.1397 11 7 7.5381 2.2044 -1.2507 12 6 8.2158 2.1382 -2.4139 13 8 7.6143 2.0160 -3.4600 14 6 9.7207 2.2161 -2.4148 15 6 10.2357 2.1182 -3.8521 16 8 11.6628 2.1927 -3.8529 17 6 12.2836 2.1210 -5.0596 18 6 13.6669 2.1924 -5.1346 19 6 14.2960 2.1144 -6.3622 20 6 15.7991 2.1866 -6.4439 21 8 16.2464 3.4300 -5.8997 22 14 16.3309 2.0611 -8.2249 23 6 13.5476 1.9752 -7.5162 24 6 12.1681 1.9090 -7.4446 25 6 11.5347 1.9813 -6.2193 26 6 5.5285 2.8216 -0.0004 27 6 4.0001 2.7421 -0.0011 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3634 0.5139 0.8899 31 1 3.8039 -0.4638 -1.2501 32 1 3.7229 1.0757 -2.1398 33 1 6.0305 0.1666 -0.3605 34 1 6.0302 0.1674 -2.1407 35 1 8.0192 2.3024 -0.4141 36 1 10.0357 3.1647 -1.9800 37 1 10.1274 1.3938 -1.8259 38 1 9.9207 1.1698 -4.2872 39 1 9.8290 2.9408 -4.4405 40 1 14.2518 2.3055 -4.2337 41 1 16.2338 1.3641 -5.8760 42 1 17.2063 3.5455 -5.9200 43 1 15.7447 3.1770 -9.0099 44 1 17.8127 2.0991 -8.3164 45 1 14.0410 1.9185 -8.4752 46 1 11.5855 1.8007 -8.3475 47 1 10.4574 1.9291 -6.1638 48 1 5.8375 3.8668 -0.0004 49 1 5.9182 2.3271 0.8894 50 1 3.6106 3.2364 0.8889 51 1 3.6101 3.2360 -0.8911 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14475160_4549614.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:58 Heat of formation + Delta-G solvation = -174.136028 kcal Electronic energy + Delta-G solvation = -31570.052103 eV Core-core repulsion = 27014.960613 eV Total energy + Delta-G solvation = -4555.091490 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -41.86992 -41.39129 -40.90826 -39.27821 -38.88353 -37.56411 -37.44137 -35.36092 -33.40821 -32.60107 -31.89757 -31.36839 -30.56415 -28.56073 -27.04754 -25.74403 -24.24680 -23.83349 -23.65932 -22.13015 -21.76116 -21.43803 -20.75618 -19.16801 -18.65478 -18.56428 -17.96351 -17.83045 -17.56108 -17.46873 -17.35979 -17.14902 -16.87140 -16.10637 -15.84311 -15.68875 -15.42883 -15.21227 -14.96997 -14.78965 -14.55602 -14.47726 -14.23614 -14.14351 -13.93898 -13.93517 -13.64233 -13.44812 -13.30309 -13.03411 -12.94836 -12.90232 -12.66922 -12.39177 -12.34711 -12.19947 -12.01985 -11.86659 -11.80719 -11.68442 -11.58521 -11.48724 -11.36119 -10.97381 -10.57030 -10.09998 -9.90012 -9.27400 -4.90902 0.19262 0.38827 1.08059 1.28828 1.54479 1.61407 1.67012 1.75130 1.96380 2.48808 2.62550 3.36478 3.47762 3.53829 3.59642 3.66608 3.77010 3.84664 3.89806 3.92441 4.00935 4.08125 4.10697 4.18390 4.23723 4.25697 4.26355 4.27169 4.30284 4.32452 4.37451 4.42743 4.49025 4.60871 4.64917 4.67579 4.69159 4.77811 4.77931 4.93470 4.97598 5.04095 5.08431 5.10300 5.24478 5.24738 5.29296 5.34810 5.37397 5.44973 5.49644 5.68941 6.32675 6.50015 6.58641 6.63792 7.19364 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.362 6.362 3 C 0.461 3.539 4 O -0.541 6.541 5 C -0.074 4.074 6 H 0.138 0.862 7 C -0.103 4.103 8 C -0.120 4.120 9 C 0.141 3.859 10 H 0.064 0.936 11 N -0.710 5.710 12 C 0.520 3.480 13 O -0.583 6.583 14 C -0.133 4.133 15 C 0.073 3.927 16 O -0.323 6.323 17 C 0.117 3.883 18 C -0.142 4.142 19 C -0.048 4.048 20 C -0.089 4.089 21 O -0.559 6.559 22 Si 0.771 3.229 23 C -0.160 4.160 24 C -0.075 4.075 25 C -0.212 4.212 26 C -0.114 4.114 27 C -0.100 4.100 28 H 0.058 0.942 29 H 0.129 0.871 30 H 0.061 0.939 31 H 0.087 0.913 32 H 0.055 0.945 33 H 0.092 0.908 34 H 0.057 0.943 35 H 0.420 0.580 36 H 0.124 0.876 37 H 0.129 0.871 38 H 0.067 0.933 39 H 0.061 0.939 40 H 0.129 0.871 41 H 0.098 0.902 42 H 0.396 0.604 43 H -0.299 1.299 44 H -0.283 1.283 45 H 0.146 0.854 46 H 0.154 0.846 47 H 0.138 0.862 48 H 0.082 0.918 49 H 0.099 0.901 50 H 0.078 0.922 51 H 0.056 0.944 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.169 -5.140 3.820 6.762 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.278 6.278 3 C 0.305 3.695 4 O -0.431 6.431 5 C -0.093 4.093 6 H 0.156 0.844 7 C -0.142 4.142 8 C -0.158 4.158 9 C 0.036 3.964 10 H 0.082 0.918 11 N -0.362 5.362 12 C 0.308 3.692 13 O -0.463 6.463 14 C -0.172 4.172 15 C -0.002 4.002 16 O -0.238 6.238 17 C 0.072 3.928 18 C -0.161 4.161 19 C -0.048 4.048 20 C -0.197 4.197 21 O -0.369 6.369 22 Si 0.676 3.324 23 C -0.177 4.177 24 C -0.093 4.093 25 C -0.231 4.231 26 C -0.152 4.152 27 C -0.138 4.138 28 H 0.077 0.923 29 H 0.147 0.853 30 H 0.080 0.920 31 H 0.106 0.894 32 H 0.074 0.926 33 H 0.110 0.890 34 H 0.076 0.924 35 H 0.258 0.742 36 H 0.142 0.858 37 H 0.147 0.853 38 H 0.086 0.914 39 H 0.080 0.920 40 H 0.147 0.853 41 H 0.115 0.885 42 H 0.246 0.754 43 H -0.227 1.227 44 H -0.210 1.210 45 H 0.163 0.837 46 H 0.172 0.828 47 H 0.156 0.844 48 H 0.101 0.899 49 H 0.118 0.882 50 H 0.097 0.903 51 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges 1.367 -4.460 2.738 5.409 hybrid contribution 0.121 1.097 0.784 1.354 sum 1.488 -3.363 3.522 5.092 Atomic orbital electron populations 1.23514 0.75170 1.05594 1.02341 1.86506 1.24648 1.33150 1.83545 1.24417 0.93119 0.80977 0.70939 1.90675 1.68187 1.37489 1.46745 1.21258 0.84966 0.99819 1.03279 0.84399 1.21434 0.95726 1.01622 0.95373 1.21845 0.94427 0.96162 1.03407 1.21021 0.79440 0.96373 0.99523 0.91821 1.45886 1.07189 1.73780 1.09332 1.20603 0.90027 0.74989 0.83629 1.90744 1.71536 1.50974 1.33057 1.21440 0.90665 1.08068 0.97050 1.22456 0.77187 1.02410 0.98176 1.85947 1.21983 1.88243 1.27586 1.19113 0.92288 0.96769 0.84624 1.20320 0.91287 1.05646 0.98800 1.19308 0.94296 0.98381 0.92791 1.25106 0.93467 0.88918 1.12254 1.86551 1.29217 1.37493 1.83613 0.94016 0.77402 0.87654 0.73373 1.21128 0.94512 1.04324 0.97738 1.21233 0.94284 0.95858 0.97924 1.21550 1.00949 1.07913 0.92648 1.21750 0.93904 1.02063 0.97438 1.21375 0.95773 0.93226 1.03425 0.92341 0.85286 0.91987 0.89423 0.92584 0.88964 0.92411 0.74235 0.85777 0.85310 0.91425 0.92034 0.85315 0.88455 0.75373 1.22703 1.21049 0.83673 0.82791 0.84393 0.89911 0.88205 0.90315 0.92469 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 113.37 1.20 1.17 16 2 O -0.36 -0.94 10.47 -51.40 -0.54 -1.48 16 3 C 0.46 1.81 7.26 71.23 0.52 2.33 16 4 O -0.54 -5.79 15.73 21.95 0.35 -5.44 16 5 C -0.07 0.22 2.63 -11.54 -0.03 0.19 16 6 H 0.14 -1.10 8.14 -2.39 -0.02 -1.12 16 7 C -0.10 0.29 5.13 30.59 0.16 0.45 16 8 C -0.12 0.48 5.49 30.59 0.17 0.65 16 9 C 0.14 -0.50 2.45 44.99 0.11 -0.39 16 10 H 0.06 0.17 7.58 -2.39 -0.02 0.16 16 11 N -0.71 4.07 5.08 -442.52 -2.25 1.83 16 12 C 0.52 0.00 7.79 87.66 0.68 0.68 16 13 O -0.58 -5.45 15.64 -3.05 -0.05 -5.50 16 14 C -0.13 0.55 6.07 29.84 0.18 0.73 16 15 C 0.07 0.14 4.03 71.98 0.29 0.43 16 16 O -0.32 -1.76 10.14 -92.35 -0.94 -2.70 16 17 C 0.12 0.81 6.69 22.51 0.15 0.96 16 18 C -0.14 -0.99 9.55 22.37 0.21 -0.78 16 19 C -0.05 -0.23 5.42 -19.88 -0.11 -0.33 16 20 C -0.09 -0.08 2.81 71.24 0.20 0.12 16 21 O -0.56 -2.05 12.74 -148.98 -1.90 -3.95 16 22 Si 0.77 -1.08 29.79 68.60 2.04 0.97 16 23 C -0.16 -0.41 8.67 22.28 0.19 -0.22 16 24 C -0.08 -0.17 10.04 22.26 0.22 0.05 16 25 C -0.21 -1.00 9.04 22.36 0.20 -0.79 16 26 C -0.11 0.84 5.40 30.61 0.17 1.01 16 27 C -0.10 0.28 4.50 30.61 0.14 0.42 16 28 H 0.06 0.02 8.13 -2.39 -0.02 0.00 16 29 H 0.13 -0.84 8.14 -2.39 -0.02 -0.86 16 30 H 0.06 -0.02 8.13 -2.38 -0.02 -0.04 16 31 H 0.09 -0.31 8.11 -2.39 -0.02 -0.33 16 32 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 33 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 34 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 35 H 0.42 -5.21 8.60 -92.71 -0.80 -6.01 16 36 H 0.12 -0.91 8.14 -2.39 -0.02 -0.93 16 37 H 0.13 -1.06 8.14 -2.38 -0.02 -1.08 16 38 H 0.07 0.18 7.62 -2.39 -0.02 0.16 16 39 H 0.06 0.23 7.62 -2.38 -0.02 0.21 16 40 H 0.13 0.85 8.06 -2.91 -0.02 0.82 16 41 H 0.10 -0.31 7.96 -2.39 -0.02 -0.33 16 42 H 0.40 -1.92 8.74 -74.06 -0.65 -2.57 16 43 H -0.30 -1.81 7.11 99.48 0.71 -1.10 16 44 H -0.28 -0.62 7.11 99.48 0.71 0.08 16 45 H 0.15 -0.27 4.87 -2.91 -0.01 -0.28 16 46 H 0.15 -0.47 8.06 -2.91 -0.02 -0.49 16 47 H 0.14 0.39 6.30 -2.91 -0.02 0.37 16 48 H 0.08 -0.62 8.14 -2.39 -0.02 -0.64 16 49 H 0.10 -1.19 8.14 -2.39 -0.02 -1.21 16 50 H 0.08 -0.16 8.10 -2.39 -0.02 -0.18 16 51 H 0.06 0.08 8.10 -2.39 -0.02 0.06 16 Total: 0.00 -26.55 416.59 0.92 -25.63 By element: Atomic # 1 Polarization: -15.59 SS G_CDS: -0.46 Total: -16.04 kcal Atomic # 6 Polarization: 2.03 SS G_CDS: 4.65 Total: 6.68 kcal Atomic # 7 Polarization: 4.07 SS G_CDS: -2.25 Total: 1.83 kcal Atomic # 8 Polarization: -15.99 SS G_CDS: -3.07 Total: -19.06 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: 2.04 Total: 0.97 kcal Total: -26.55 0.92 -25.63 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_4549614.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -148.504 kcal (2) G-P(sol) polarization free energy of solvation -26.549 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -175.053 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.917 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.632 kcal (6) G-S(sol) free energy of system = (1) + (5) -174.136 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds