Wall clock time and date at job start Tue Mar 9 2021 12:53:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34232 * 116.99891 * 2 1 4 4 O 1.20824 * 120.00038 * 359.97438 * 3 2 1 5 5 C 1.50704 * 120.00067 * 179.97438 * 3 2 1 6 6 H 1.09003 * 109.46748 * 59.99642 * 5 3 2 7 7 C 1.52996 * 109.47158 * 179.97438 * 5 3 2 8 8 C 1.52991 * 109.47278 * 179.97438 * 7 5 3 9 9 C 1.53007 * 109.47318 * 300.00296 * 8 7 5 10 10 H 1.08993 * 109.47006 * 300.00105 * 9 8 7 11 11 N 1.46499 * 109.47026 * 179.97438 * 9 8 7 12 12 C 1.34779 * 119.99550 * 155.00233 * 11 9 8 13 13 O 1.21283 * 120.00188 * 359.97438 * 12 11 9 14 14 C 1.50697 * 119.99802 * 180.02562 * 12 11 9 15 15 O 1.42898 * 109.47354 * 180.02562 * 14 12 11 16 16 C 1.35974 * 117.00368 * 179.97438 * 15 14 12 17 17 C 1.38679 * 120.00298 * 179.97438 * 16 15 14 18 18 C 1.50701 * 119.99795 * 359.97438 * 17 16 15 19 19 O 1.42896 * 109.47417 * 74.99762 * 18 17 16 20 20 Si 1.86301 * 109.47149 * 194.99778 * 18 17 16 21 21 C 1.38148 * 120.00475 * 180.25130 * 17 16 15 22 22 C 1.38688 * 119.99609 * 359.49691 * 21 17 16 23 23 O 1.35988 * 119.99983 * 180.25106 * 22 21 17 24 24 C 1.42897 * 116.99749 * 180.27550 * 23 22 21 25 25 C 1.38721 * 119.99792 * 0.52732 * 22 21 17 26 26 C 1.38112 * 120.00136 * 359.72413 * 25 22 21 27 27 C 1.52996 * 109.46877 * 59.99869 * 9 8 7 28 28 C 1.52994 * 109.46946 * 299.99916 * 5 3 2 29 29 H 1.09002 * 109.47470 * 299.99795 * 1 2 3 30 30 H 1.08994 * 109.47046 * 60.00475 * 1 2 3 31 31 H 1.09007 * 109.46918 * 180.02562 * 1 2 3 32 32 H 1.09007 * 109.46774 * 59.99777 * 7 5 3 33 33 H 1.09001 * 109.47599 * 300.00233 * 7 5 3 34 34 H 1.09005 * 109.47315 * 180.02562 * 8 7 5 35 35 H 1.09007 * 109.47343 * 60.00195 * 8 7 5 36 36 H 0.96996 * 120.00558 * 334.99920 * 11 9 8 37 37 H 1.08998 * 109.47276 * 59.99383 * 14 12 11 38 38 H 1.09001 * 109.47217 * 299.99678 * 14 12 11 39 39 H 1.09002 * 109.47060 * 314.99788 * 18 17 16 40 40 H 0.96703 * 114.00193 * 300.00261 * 19 18 17 41 41 H 1.48503 * 110.00152 * 59.99805 * 20 18 17 42 42 H 1.48498 * 110.00118 * 181.32031 * 20 18 17 43 43 H 1.07999 * 120.00627 * 179.72951 * 21 17 16 44 44 H 1.08998 * 109.47414 * 300.00083 * 24 23 22 45 45 H 1.08993 * 109.47076 * 60.00229 * 24 23 22 46 46 H 1.08998 * 109.46989 * 179.97438 * 24 23 22 47 47 H 1.07998 * 119.99956 * 179.74700 * 25 22 21 48 48 H 1.07994 * 119.99934 * 180.02562 * 26 25 22 49 49 H 1.09003 * 109.47467 * 59.99860 * 27 9 8 50 50 H 1.09001 * 109.47288 * 180.02562 * 27 9 8 51 51 H 1.09003 * 109.47173 * 299.99465 * 28 5 3 52 52 H 1.08996 * 109.47621 * 59.99935 * 28 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 1 3.9564 0.7806 -0.8892 7 6 4.0001 2.7421 -0.0002 8 6 5.5279 2.8223 0.0011 9 6 6.0740 2.1296 1.2513 10 1 5.6835 2.6243 2.1405 11 7 7.5370 2.2059 1.2521 12 6 8.2145 2.1403 2.4154 13 8 7.6130 2.0187 3.4615 14 6 9.7194 2.2193 2.4164 15 8 10.2004 2.1273 3.7588 16 6 11.5473 2.1819 3.9371 17 6 12.0817 2.0989 5.2141 18 6 11.1695 1.9487 6.4043 19 8 10.6710 0.6105 6.4566 20 14 12.1180 2.3194 7.9643 21 6 13.4498 2.1597 5.3958 22 6 14.2895 2.2932 4.3001 23 8 15.6365 2.3479 4.4784 24 6 16.4408 2.4920 3.3061 25 6 13.7549 2.3768 3.0228 26 6 12.3869 2.3212 2.8417 27 6 5.6402 0.6624 1.2520 28 6 4.1128 0.5817 1.2502 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5137 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 3.6099 3.2368 0.8894 33 1 3.6107 3.2357 -0.8906 34 1 5.8369 3.8676 0.0010 35 1 5.9185 2.3275 -0.8883 36 1 8.0181 2.3035 0.4156 37 1 10.0337 3.1681 1.9816 38 1 10.1268 1.3973 1.8277 39 1 10.3350 2.6439 6.3125 40 1 10.1657 0.3482 5.6749 41 1 12.6418 3.7084 7.9225 42 1 11.2381 2.1438 9.1476 43 1 13.8657 2.0994 6.3907 44 1 16.2675 1.6466 2.6404 45 1 16.1752 3.4173 2.7949 46 1 17.4930 2.5227 3.5888 47 1 14.4086 2.4848 2.1699 48 1 11.9708 2.3859 1.8472 49 1 6.0307 0.1676 0.3626 50 1 6.0289 0.1690 2.1428 51 1 3.7228 1.0760 2.1399 52 1 3.8038 -0.4636 1.2503 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475160_4974302.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:43 Heat of formation + Delta-G solvation = -202.234304 kcal Electronic energy + Delta-G solvation = -34883.891358 eV Core-core repulsion = 30008.899243 eV Total energy + Delta-G solvation = -4874.992115 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -41.92331 -41.73313 -41.00495 -40.02393 -39.03979 -37.97688 -37.42159 -36.83368 -35.43608 -32.80372 -32.10710 -31.88304 -30.84867 -29.37865 -28.44901 -28.03937 -26.49418 -24.92735 -23.99534 -23.61414 -22.39722 -22.04120 -21.67290 -20.91440 -19.54278 -18.82078 -18.68115 -18.52768 -17.92157 -17.78966 -17.56277 -17.45715 -17.33310 -17.15798 -16.69996 -16.03926 -15.93919 -15.78726 -15.42744 -15.35970 -15.17806 -15.12855 -14.97515 -14.46209 -14.26186 -14.15198 -14.04929 -13.96502 -13.75162 -13.63017 -13.47296 -13.41545 -13.11115 -13.06702 -12.74743 -12.68202 -12.50562 -12.36865 -12.25729 -11.86444 -11.81418 -11.72249 -11.54413 -11.52435 -11.33976 -11.14970 -11.00096 -10.89388 -10.25063 -10.07487 -8.82453 -4.74309 0.07207 0.34513 1.17936 1.34190 1.41066 1.53751 1.68844 1.79024 2.14614 2.25292 2.46873 2.55837 3.31652 3.36499 3.44359 3.53584 3.59558 3.65269 3.73410 3.77000 3.79798 3.92018 3.95757 4.06889 4.07845 4.11090 4.12022 4.12274 4.16240 4.17186 4.17703 4.23503 4.25511 4.33511 4.43414 4.46267 4.53249 4.55769 4.62159 4.64508 4.78416 4.84193 4.93919 4.96801 5.02406 5.07918 5.10551 5.12571 5.18193 5.28768 5.39517 5.40537 6.05784 6.26111 6.38093 6.72475 6.74263 7.01345 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.463 3.537 4 O -0.505 6.505 5 C -0.081 4.081 6 H 0.112 0.888 7 C -0.101 4.101 8 C -0.125 4.125 9 C 0.144 3.856 10 H 0.093 0.907 11 N -0.724 5.724 12 C 0.517 3.483 13 O -0.510 6.510 14 C 0.041 3.959 15 O -0.290 6.290 16 C 0.099 3.901 17 C -0.098 4.098 18 C -0.072 4.072 19 O -0.533 6.533 20 Si 0.743 3.257 21 C -0.103 4.103 22 C 0.103 3.897 23 O -0.314 6.314 24 C 0.026 3.974 25 C -0.165 4.165 26 C -0.165 4.165 27 C -0.128 4.128 28 C -0.109 4.109 29 H 0.064 0.936 30 H 0.064 0.936 31 H 0.103 0.897 32 H 0.078 0.922 33 H 0.081 0.919 34 H 0.079 0.921 35 H 0.074 0.926 36 H 0.402 0.598 37 H 0.093 0.907 38 H 0.095 0.905 39 H 0.078 0.922 40 H 0.368 0.632 41 H -0.251 1.251 42 H -0.254 1.254 43 H 0.146 0.854 44 H 0.056 0.944 45 H 0.055 0.945 46 H 0.103 0.897 47 H 0.135 0.865 48 H 0.133 0.867 49 H 0.071 0.929 50 H 0.077 0.923 51 H 0.073 0.927 52 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.919 -1.386 -7.728 8.775 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.392 6.392 5 C -0.100 4.100 6 H 0.130 0.870 7 C -0.139 4.139 8 C -0.163 4.163 9 C 0.040 3.960 10 H 0.111 0.889 11 N -0.378 5.378 12 C 0.301 3.699 13 O -0.383 6.383 14 C -0.038 4.038 15 O -0.203 6.203 16 C 0.054 3.946 17 C -0.099 4.099 18 C -0.180 4.180 19 O -0.339 6.339 20 Si 0.641 3.359 21 C -0.121 4.121 22 C 0.058 3.942 23 O -0.227 6.227 24 C -0.069 4.069 25 C -0.184 4.184 26 C -0.184 4.184 27 C -0.167 4.167 28 C -0.147 4.147 29 H 0.083 0.917 30 H 0.082 0.918 31 H 0.122 0.878 32 H 0.096 0.904 33 H 0.099 0.901 34 H 0.097 0.903 35 H 0.093 0.907 36 H 0.236 0.764 37 H 0.111 0.889 38 H 0.112 0.888 39 H 0.096 0.904 40 H 0.216 0.784 41 H -0.175 1.175 42 H -0.179 1.179 43 H 0.164 0.836 44 H 0.075 0.925 45 H 0.074 0.926 46 H 0.121 0.879 47 H 0.153 0.847 48 H 0.151 0.849 49 H 0.089 0.911 50 H 0.096 0.904 51 H 0.091 0.909 52 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 3.555 -0.692 -5.334 6.447 hybrid contribution -1.132 0.542 -2.493 2.791 sum 2.423 -0.149 -7.827 8.195 Atomic orbital electron populations 1.23320 0.75924 1.04007 1.02719 1.86503 1.23739 1.33343 1.83883 1.23782 0.92006 0.81428 0.72193 1.90693 1.67197 1.36381 1.44891 1.21169 0.87055 0.99466 1.02284 0.87022 1.21394 0.94467 0.93515 1.04569 1.21817 0.95517 1.01650 0.97301 1.21099 0.78513 0.96444 0.99977 0.88860 1.45877 1.07565 1.75669 1.08661 1.20025 0.88643 0.76958 0.84272 1.90796 1.69813 1.46601 1.31110 1.22458 0.92844 1.03884 0.84630 1.86110 1.18869 1.88683 1.26665 1.18655 0.81982 1.00396 0.93525 1.19481 0.93564 1.03672 0.93223 1.25366 0.99469 0.87683 1.05505 1.86708 1.73848 1.27686 1.45610 0.93027 0.85849 0.82797 0.74198 1.20061 0.90491 1.03505 0.98039 1.18817 0.83304 0.98811 0.93242 1.86116 1.14122 1.88204 1.34270 1.23100 0.95337 1.01077 0.87372 1.21083 0.95551 1.05415 0.96343 1.21016 0.93618 1.05745 0.98010 1.21920 0.95032 0.96269 1.03433 1.21490 0.95383 1.01714 0.96102 0.91738 0.91762 0.87836 0.90367 0.90074 0.90281 0.90742 0.76363 0.88906 0.88766 0.90410 0.78391 1.17528 1.17901 0.83645 0.92532 0.92629 0.87862 0.84703 0.84918 0.91059 0.90440 0.90860 0.89788 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.42 10.47 -39.26 -0.41 -0.83 16 3 C 0.46 0.72 7.26 36.01 0.26 0.99 16 4 O -0.50 -2.30 15.73 -18.75 -0.29 -2.59 16 5 C -0.08 0.12 2.63 -91.77 -0.24 -0.12 16 6 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 7 C -0.10 0.18 4.49 -26.74 -0.12 0.06 16 8 C -0.12 0.45 5.39 -26.73 -0.14 0.30 16 9 C 0.14 -0.29 2.46 -67.93 -0.17 -0.45 16 10 H 0.09 0.04 7.58 -51.93 -0.39 -0.35 16 11 N -0.72 2.12 5.08 -53.81 -0.27 1.84 16 12 C 0.52 0.09 7.87 -10.99 -0.09 0.00 16 13 O -0.51 -2.58 16.16 -14.35 -0.23 -2.82 16 14 C 0.04 -0.08 5.22 36.00 0.19 0.11 16 15 O -0.29 -0.52 8.56 -39.57 -0.34 -0.86 16 16 C 0.10 0.16 6.62 -39.24 -0.26 -0.10 16 17 C -0.10 -0.24 5.28 -104.49 -0.55 -0.79 16 18 C -0.07 -0.22 2.33 36.01 0.08 -0.13 16 19 O -0.53 -2.03 12.65 -35.23 -0.45 -2.48 16 20 Si 0.74 1.33 30.17 -169.99 -5.13 -3.79 16 21 C -0.10 -0.18 8.59 -39.45 -0.34 -0.52 16 22 C 0.10 0.15 6.69 -39.24 -0.26 -0.12 16 23 O -0.31 -0.37 10.50 -19.70 -0.21 -0.58 16 24 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 25 C -0.17 0.03 9.03 -39.45 -0.36 -0.32 16 26 C -0.17 0.07 9.03 -39.45 -0.36 -0.29 16 27 C -0.13 0.26 5.49 -26.76 -0.15 0.11 16 28 C -0.11 0.18 5.13 -26.76 -0.14 0.04 16 29 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 30 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 31 H 0.10 -0.30 8.14 -51.92 -0.42 -0.73 16 32 H 0.08 -0.03 8.10 -51.93 -0.42 -0.45 16 33 H 0.08 -0.11 8.10 -51.93 -0.42 -0.53 16 34 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 35 H 0.07 -0.37 8.14 -51.93 -0.42 -0.79 16 36 H 0.40 -2.46 8.60 -40.82 -0.35 -2.81 16 37 H 0.09 -0.38 7.66 -51.93 -0.40 -0.78 16 38 H 0.09 -0.42 7.66 -51.93 -0.40 -0.82 16 39 H 0.08 0.30 7.82 -51.93 -0.41 -0.11 16 40 H 0.37 0.88 8.60 45.56 0.39 1.27 16 41 H -0.25 -0.74 7.11 56.52 0.40 -0.34 16 42 H -0.25 -1.15 7.11 56.52 0.40 -0.75 16 43 H 0.15 0.03 5.12 -52.49 -0.27 -0.24 16 44 H 0.06 -0.19 7.66 -51.93 -0.40 -0.58 16 45 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 46 H 0.10 -0.38 8.14 -51.93 -0.42 -0.81 16 47 H 0.14 -0.34 6.29 -52.49 -0.33 -0.67 16 48 H 0.13 -0.45 6.29 -52.49 -0.33 -0.78 16 49 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 50 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 51 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 52 H 0.08 -0.14 8.11 -51.93 -0.42 -0.56 16 LS Contribution 424.06 15.07 6.39 6.39 Total: 0.00 -10.83 424.06 -9.48 -20.31 By element: Atomic # 1 Polarization: -7.37 SS G_CDS: -7.97 Total: -15.34 kcal Atomic # 6 Polarization: 1.32 SS G_CDS: -0.58 Total: 0.74 kcal Atomic # 7 Polarization: 2.12 SS G_CDS: -0.27 Total: 1.84 kcal Atomic # 8 Polarization: -8.23 SS G_CDS: -1.93 Total: -10.16 kcal Atomic # 14 Polarization: 1.33 SS G_CDS: -5.13 Total: -3.79 kcal Total LS contribution 6.39 Total: 6.39 kcal Total: -10.83 -9.48 -20.31 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_4974302.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -181.923 kcal (2) G-P(sol) polarization free energy of solvation -10.828 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -192.751 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.483 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.311 kcal (6) G-S(sol) free energy of system = (1) + (5) -202.234 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds