Wall clock time and date at job start Tue Mar 9 2021 12:53:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34230 * 116.99670 * 2 1 4 4 O 1.20829 * 120.00058 * 0.02562 * 3 2 1 5 5 C 1.50703 * 120.00092 * 180.02562 * 3 2 1 6 6 H 1.09004 * 109.46815 * 59.99870 * 5 3 2 7 7 C 1.52995 * 109.47251 * 180.02562 * 5 3 2 8 8 C 1.53006 * 109.47154 * 180.02562 * 7 5 3 9 9 C 1.52999 * 109.46746 * 299.99920 * 8 7 5 10 10 H 1.09004 * 109.47202 * 299.99543 * 9 8 7 11 11 N 1.46498 * 109.46891 * 180.02562 * 9 8 7 12 12 C 1.34772 * 120.00066 * 154.99794 * 11 9 8 13 13 O 1.21696 * 120.00430 * 5.48293 * 12 11 9 14 14 C 1.46671 * 120.00093 * 185.48514 * 12 11 9 15 15 C 1.37891 * 126.22610 * 355.24606 * 14 12 11 16 16 C 1.39877 * 107.09088 * 179.97438 * 15 14 12 17 17 Br 1.89106 * 126.07169 * 180.02562 * 16 15 14 18 18 C 1.35503 * 107.85564 * 0.02562 * 16 15 14 19 19 C 1.50703 * 125.57180 * 179.97438 * 18 16 15 20 20 O 1.42894 * 109.47174 * 210.02938 * 19 18 16 21 21 Si 1.86303 * 109.47134 * 330.02563 * 19 18 16 22 22 N 1.35600 * 108.85754 * 0.26584 * 18 16 15 23 23 C 1.46503 * 125.67523 * 179.73439 * 22 18 16 24 24 C 1.52995 * 109.47229 * 60.00125 * 9 8 7 25 25 C 1.52999 * 109.46732 * 300.00199 * 5 3 2 26 26 H 1.09000 * 109.47139 * 299.99659 * 1 2 3 27 27 H 1.08996 * 109.47646 * 59.99747 * 1 2 3 28 28 H 1.09007 * 109.46761 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.47553 * 59.99547 * 7 5 3 30 30 H 1.09003 * 109.46829 * 299.99631 * 7 5 3 31 31 H 1.08996 * 109.46938 * 179.97438 * 8 7 5 32 32 H 1.09004 * 109.46897 * 59.99650 * 8 7 5 33 33 H 0.97006 * 120.00141 * 334.99744 * 11 9 8 34 34 H 1.07994 * 126.45306 * 0.03905 * 15 14 12 35 35 H 1.08996 * 109.47128 * 90.02610 * 19 18 16 36 36 H 0.96697 * 114.00182 * 180.02562 * 20 19 18 37 37 H 1.48500 * 110.00144 * 178.67910 * 21 19 18 38 38 H 1.48496 * 110.00256 * 300.00459 * 21 19 18 39 39 H 1.08999 * 109.46779 * 83.94249 * 23 22 18 40 40 H 1.08998 * 109.46544 * 203.94211 * 23 22 18 41 41 H 1.08999 * 109.47304 * 323.94329 * 23 22 18 42 42 H 1.09000 * 109.47553 * 60.00119 * 24 9 8 43 43 H 1.09003 * 109.46829 * 180.02562 * 24 9 8 44 44 H 1.09004 * 109.47202 * 299.99433 * 25 5 3 45 45 H 1.08996 * 109.47599 * 60.00055 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2094 0.0005 5 6 3.5663 1.2750 -0.0006 6 1 3.9556 0.7811 -0.8909 7 6 4.0000 2.7422 0.0002 8 6 5.5279 2.8224 -0.0011 9 6 6.0760 2.1279 1.2472 10 1 5.6870 2.6213 2.1379 11 7 7.5389 2.2051 1.2464 12 6 8.2180 2.1381 2.4086 13 8 7.6254 1.9136 3.4476 14 6 9.6712 2.3357 2.4214 15 6 10.4803 2.5049 1.3177 16 6 11.7890 2.6590 1.7871 17 35 13.3292 2.9269 0.7231 18 6 11.7570 2.5823 3.1395 19 6 12.9505 2.6964 4.0526 20 8 12.7243 1.9211 5.2314 21 14 14.4668 2.0635 3.1745 22 7 10.4764 2.3797 3.5369 23 6 10.0245 2.2361 4.9230 24 6 5.6423 0.6607 1.2464 25 6 4.1138 0.5812 1.2483 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3633 -1.0277 -0.0005 29 1 3.6106 3.2358 0.8906 30 1 3.6099 3.2368 -0.8894 31 1 5.8369 3.8676 -0.0010 32 1 5.9169 2.3289 -0.8918 33 1 8.0189 2.3046 0.4093 34 1 10.1632 2.5173 0.2854 35 1 13.0992 3.7406 4.3274 36 1 13.4534 1.9484 5.8660 37 1 15.6565 2.2000 4.0528 38 1 14.2768 0.6406 2.7943 39 1 9.8728 3.2232 5.3597 40 1 9.0864 1.6815 4.9437 41 1 10.7782 1.6969 5.4969 42 1 6.0313 0.1672 0.3558 43 1 6.0324 0.1661 2.1360 44 1 3.7244 1.0751 2.1386 45 1 3.8048 -0.4641 1.2482 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14475160_5000100.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:49 Heat of formation + Delta-G solvation = -110.727167 kcal Electronic energy + Delta-G solvation = -29691.057010 eV Core-core repulsion = 25335.917173 eV Total energy + Delta-G solvation = -4355.139838 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 401.072 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.86056 -41.82257 -40.69653 -38.94950 -37.95141 -37.53833 -35.59023 -34.51127 -32.72819 -31.86747 -31.51293 -30.77908 -28.60733 -27.37784 -26.95931 -24.69002 -23.81784 -23.13331 -22.00321 -21.45636 -21.00358 -20.36248 -18.89498 -18.64271 -18.58199 -17.83448 -17.48193 -17.34055 -17.14332 -16.85770 -16.17028 -15.83645 -15.57734 -15.19792 -15.10033 -14.91932 -14.73206 -14.72240 -14.30731 -14.24776 -14.08256 -13.96253 -13.73216 -13.65353 -13.29482 -13.24142 -13.00607 -12.83472 -12.72803 -12.64982 -12.38347 -12.17919 -11.97440 -11.85490 -11.58270 -11.56616 -11.47238 -11.37549 -11.08403 -10.80154 -10.19328 -9.85947 -9.28812 -4.68367 0.16231 0.36104 0.90929 1.09819 1.24876 1.42777 1.58417 1.72725 1.95182 2.16136 2.28774 2.90807 3.43527 3.48744 3.52670 3.62673 3.71749 3.79274 3.93808 4.09249 4.18905 4.20726 4.22188 4.27177 4.28055 4.29954 4.31116 4.34106 4.43817 4.44654 4.58016 4.67436 4.69873 4.77323 4.79688 4.93559 5.06989 5.09774 5.12524 5.25253 5.28703 5.28970 5.36009 5.47513 5.63133 5.80578 6.41804 6.44777 6.65442 7.08144 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.461 3.539 4 O -0.541 6.541 5 C -0.075 4.075 6 H 0.139 0.861 7 C -0.099 4.099 8 C -0.114 4.114 9 C 0.147 3.853 10 H 0.067 0.933 11 N -0.696 5.696 12 C 0.591 3.409 13 O -0.577 6.577 14 C -0.062 4.062 15 C -0.088 4.088 16 C -0.195 4.195 17 Br 0.094 6.906 18 C 0.093 3.907 19 C -0.044 4.044 20 O -0.556 6.556 21 Si 0.621 3.379 22 N -0.391 5.391 23 C 0.059 3.941 24 C -0.121 4.121 25 C -0.102 4.102 26 H 0.058 0.942 27 H 0.062 0.938 28 H 0.128 0.872 29 H 0.058 0.942 30 H 0.080 0.920 31 H 0.086 0.914 32 H 0.102 0.898 33 H 0.419 0.581 34 H 0.193 0.807 35 H 0.110 0.890 36 H 0.402 0.598 37 H -0.253 1.253 38 H -0.296 1.296 39 H 0.081 0.919 40 H 0.093 0.907 41 H 0.111 0.889 42 H 0.092 0.908 43 H 0.055 0.945 44 H 0.057 0.943 45 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.135 0.883 -4.749 5.282 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.306 3.694 4 O -0.430 6.430 5 C -0.094 4.094 6 H 0.156 0.844 7 C -0.137 4.137 8 C -0.152 4.152 9 C 0.043 3.957 10 H 0.086 0.914 11 N -0.347 5.347 12 C 0.379 3.621 13 O -0.458 6.458 14 C -0.176 4.176 15 C -0.115 4.115 16 C -0.280 4.280 17 Br 0.177 6.823 18 C -0.030 4.030 19 C -0.154 4.154 20 O -0.368 6.368 21 Si 0.523 3.477 22 N -0.062 5.062 23 C -0.081 4.081 24 C -0.160 4.160 25 C -0.141 4.141 26 H 0.077 0.923 27 H 0.081 0.919 28 H 0.146 0.854 29 H 0.077 0.923 30 H 0.099 0.901 31 H 0.105 0.895 32 H 0.120 0.880 33 H 0.258 0.742 34 H 0.210 0.790 35 H 0.128 0.872 36 H 0.254 0.746 37 H -0.178 1.178 38 H -0.222 1.222 39 H 0.100 0.900 40 H 0.112 0.888 41 H 0.129 0.871 42 H 0.110 0.890 43 H 0.074 0.926 44 H 0.075 0.925 45 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 1.952 0.383 -4.321 4.757 hybrid contribution -0.576 -0.276 1.660 1.779 sum 1.376 0.106 -2.661 2.998 Atomic orbital electron populations 1.23509 0.75205 1.05553 1.02351 1.86510 1.24626 1.33223 1.83563 1.24416 0.93115 0.80954 0.70939 1.90674 1.68178 1.37446 1.46723 1.21273 0.84938 0.99951 1.03222 0.84352 1.21362 0.95638 0.93095 1.03597 1.21759 0.93927 1.02265 0.97220 1.21073 0.78165 0.96476 0.99986 0.91445 1.45546 1.07389 1.73419 1.08388 1.16973 0.84655 0.76145 0.84295 1.90792 1.70564 1.51064 1.33421 1.20241 0.92074 1.18472 0.86788 1.21522 0.89192 1.01659 0.99100 1.20624 0.94269 1.21268 0.91852 1.96297 1.29471 1.95565 1.60928 1.20038 0.85181 1.04631 0.93139 1.24339 1.01139 1.00332 0.89547 1.86365 1.47355 1.72140 1.30903 0.92917 0.75852 0.85494 0.93399 1.43931 1.05125 1.49517 1.07676 1.22614 1.03149 1.04415 0.77894 1.21866 0.94531 0.96189 1.03378 1.21436 0.95515 1.01602 0.95512 0.92345 0.91947 0.85369 0.92345 0.90089 0.89497 0.87999 0.74238 0.78977 0.87222 0.74577 1.17788 1.22218 0.90004 0.88809 0.87104 0.88978 0.92640 0.92462 0.89570 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 113.37 1.20 1.18 16 2 O -0.36 -0.97 10.47 -51.41 -0.54 -1.51 16 3 C 0.46 1.74 7.26 71.24 0.52 2.26 16 4 O -0.54 -5.61 15.73 21.96 0.35 -5.26 16 5 C -0.08 0.24 2.63 -11.54 -0.03 0.21 16 6 H 0.14 -1.13 8.14 -2.38 -0.02 -1.14 16 7 C -0.10 0.34 4.49 30.59 0.14 0.47 16 8 C -0.11 0.90 5.39 30.60 0.16 1.06 16 9 C 0.15 -0.48 2.41 44.99 0.11 -0.37 16 10 H 0.07 0.16 7.66 -2.38 -0.02 0.14 16 11 N -0.70 2.56 5.06 -446.52 -2.26 0.30 16 12 C 0.59 2.39 7.73 86.45 0.67 3.06 16 13 O -0.58 -6.54 14.19 -4.34 -0.06 -6.60 16 14 C -0.06 -0.21 6.89 40.35 0.28 0.07 16 15 C -0.09 0.13 10.34 22.58 0.23 0.36 16 16 C -0.19 -0.19 6.15 22.03 0.14 -0.06 16 17 Br 0.09 -0.23 28.25 -20.37 -0.58 -0.81 16 18 C 0.09 0.34 6.18 41.34 0.26 0.60 16 19 C -0.04 -0.03 2.98 71.24 0.21 0.18 16 20 O -0.56 -0.40 9.80 -148.98 -1.46 -1.86 16 21 Si 0.62 1.49 27.10 68.60 1.86 3.35 16 22 N -0.39 -2.12 3.16 -519.60 -1.64 -3.77 16 23 C 0.06 0.27 10.30 127.77 1.32 1.58 16 24 C -0.12 0.39 5.50 30.61 0.17 0.56 16 25 C -0.10 0.26 5.14 30.61 0.16 0.42 16 26 H 0.06 0.02 8.13 -2.39 -0.02 0.00 16 27 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 28 H 0.13 -0.81 8.14 -2.38 -0.02 -0.83 16 29 H 0.06 0.04 8.10 -2.39 -0.02 0.02 16 30 H 0.08 -0.23 8.10 -2.39 -0.02 -0.25 16 31 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 32 H 0.10 -1.27 8.14 -2.38 -0.02 -1.29 16 33 H 0.42 -4.30 7.50 -92.70 -0.70 -4.99 16 34 H 0.19 -1.84 7.45 -2.91 -0.02 -1.86 16 35 H 0.11 -0.41 7.96 -2.39 -0.02 -0.43 16 36 H 0.40 -2.84 8.74 -74.06 -0.65 -3.49 16 37 H -0.25 -1.25 7.11 99.48 0.71 -0.54 16 38 H -0.30 -3.26 7.11 99.48 0.71 -2.55 16 39 H 0.08 0.21 8.14 -2.39 -0.02 0.19 16 40 H 0.09 0.71 5.92 -2.39 -0.01 0.70 16 41 H 0.11 0.41 5.49 -2.39 -0.01 0.40 16 42 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 43 H 0.05 0.12 8.07 -2.39 -0.02 0.10 16 44 H 0.06 0.03 8.14 -2.38 -0.02 0.01 16 45 H 0.09 -0.26 8.11 -2.39 -0.02 -0.28 16 Total: 0.00 -23.04 378.30 0.92 -22.12 By element: Atomic # 1 Polarization: -17.27 SS G_CDS: -0.27 Total: -17.54 kcal Atomic # 6 Polarization: 6.06 SS G_CDS: 5.52 Total: 11.58 kcal Atomic # 7 Polarization: 0.43 SS G_CDS: -3.90 Total: -3.47 kcal Atomic # 8 Polarization: -13.52 SS G_CDS: -1.71 Total: -15.23 kcal Atomic # 14 Polarization: 1.49 SS G_CDS: 1.86 Total: 3.35 kcal Atomic # 35 Polarization: -0.23 SS G_CDS: -0.58 Total: -0.81 kcal Total: -23.04 0.92 -22.12 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_5000100.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.610 kcal (2) G-P(sol) polarization free energy of solvation -23.035 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.645 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.918 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.117 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.727 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds