Wall clock time and date at job start Tue Mar 9 2021 12:54:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45207 * 1 3 3 C 1.34232 * 116.99265 * 2 1 4 4 O 1.20819 * 120.00141 * 359.97438 * 3 2 1 5 5 C 1.50704 * 119.99538 * 180.02562 * 3 2 1 6 6 H 1.08994 * 109.47095 * 59.99646 * 5 3 2 7 7 C 1.52999 * 109.46982 * 179.97438 * 5 3 2 8 8 C 1.53001 * 109.47127 * 179.97438 * 7 5 3 9 9 C 1.53004 * 109.46978 * 300.00004 * 8 7 5 10 10 H 1.09000 * 109.46985 * 300.00028 * 9 8 7 11 11 N 1.46496 * 109.46764 * 179.97438 * 9 8 7 12 12 C 1.34780 * 119.99877 * 155.00172 * 11 9 8 13 13 O 1.21281 * 119.99986 * 359.97438 * 12 11 9 14 14 C 1.50695 * 120.00071 * 179.97438 * 12 11 9 15 15 N 1.46501 * 109.47061 * 179.97438 * 14 12 11 16 16 C 1.36843 * 125.06192 * 265.02104 * 15 14 12 17 17 C 1.34233 * 109.93746 * 179.97438 * 16 15 14 18 18 C 1.50701 * 126.50253 * 179.97438 * 17 16 15 19 19 O 1.42901 * 109.47328 * 105.01940 * 18 17 16 20 20 Si 1.86305 * 109.46539 * 345.02178 * 18 17 16 21 21 C 1.46494 * 107.00095 * 359.97438 * 17 16 15 22 22 C 1.39592 * 134.03564 * 180.02562 * 21 17 16 23 23 C 1.36662 * 119.76435 * 180.25940 * 22 21 17 24 24 C 1.38796 * 120.52606 * 359.48003 * 23 22 21 25 25 C 1.37793 * 120.66403 * 0.50095 * 24 23 22 26 26 C 1.37694 * 125.06628 * 85.00360 * 15 14 12 27 27 C 1.52999 * 109.47195 * 60.00037 * 9 8 7 28 28 C 1.53001 * 109.47127 * 299.99872 * 27 9 8 29 29 H 1.09003 * 109.46536 * 179.97438 * 1 2 3 30 30 H 1.08992 * 109.47224 * 300.00094 * 1 2 3 31 31 H 1.08998 * 109.47049 * 60.00846 * 1 2 3 32 32 H 1.09000 * 109.47162 * 59.99591 * 7 5 3 33 33 H 1.08998 * 109.46860 * 299.99380 * 7 5 3 34 34 H 1.08994 * 109.47131 * 180.02562 * 8 7 5 35 35 H 1.09000 * 109.47285 * 59.99848 * 8 7 5 36 36 H 0.97005 * 120.00390 * 334.99757 * 11 9 8 37 37 H 1.08998 * 109.47431 * 60.00055 * 14 12 11 38 38 H 1.08996 * 109.47696 * 299.99848 * 14 12 11 39 39 H 1.08000 * 125.02789 * 359.94792 * 16 15 14 40 40 H 1.09002 * 109.47056 * 225.02715 * 18 17 16 41 41 H 0.96696 * 113.99520 * 180.02562 * 19 18 17 42 42 H 1.48494 * 110.00178 * 298.67964 * 20 18 17 43 43 H 1.48499 * 109.99999 * 60.00359 * 20 18 17 44 44 H 1.08002 * 120.11469 * 359.97438 * 22 21 17 45 45 H 1.07993 * 119.73486 * 179.70200 * 23 22 21 46 46 H 1.07993 * 119.66604 * 180.27103 * 24 23 22 47 47 H 1.08002 * 120.10512 * 179.78538 * 25 24 23 48 48 H 1.09000 * 109.47162 * 60.00099 * 27 9 8 49 49 H 1.09005 * 109.47249 * 180.02562 * 27 9 8 50 50 H 1.09000 * 109.47285 * 300.00152 * 28 27 9 51 51 H 1.08994 * 109.47131 * 179.97438 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5663 1.2750 -0.0006 6 1 3.9557 0.7811 -0.8907 7 6 4.0000 2.7423 -0.0011 8 6 5.5279 2.8225 -0.0011 9 6 6.0749 2.1294 1.2485 10 1 5.6851 2.6238 2.1383 11 7 7.5379 2.2056 1.2482 12 6 8.2163 2.1397 2.4109 13 8 7.6157 2.0177 3.4575 14 6 9.7213 2.2176 2.4106 15 7 10.2154 2.1242 3.7866 16 6 10.5145 3.1919 4.5886 17 6 10.9403 2.7598 5.7860 18 6 11.3675 3.6181 6.9488 19 8 10.3427 3.6154 7.9447 20 14 11.6568 5.3618 6.3600 21 6 10.9112 1.2956 5.7482 22 6 11.2305 0.2947 6.6673 23 6 11.0955 -1.0186 6.3144 24 6 10.6331 -1.3656 5.0526 25 6 10.3117 -0.3937 4.1301 26 6 10.4477 0.9491 4.4657 27 6 5.6412 0.6621 1.2490 28 6 4.1133 0.5819 1.2490 29 1 -0.3632 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8899 31 1 -0.3633 0.5137 -0.8900 32 1 3.6105 3.2366 0.8889 33 1 3.6100 3.2361 -0.8911 34 1 5.8369 3.8677 -0.0010 35 1 5.9177 2.3280 -0.8908 36 1 8.0183 2.3035 0.4112 37 1 10.0360 3.1662 1.9756 38 1 10.1276 1.3953 1.8218 39 1 10.4220 4.2286 4.3006 40 1 12.2889 3.2207 7.3745 41 1 10.5501 4.1492 8.7238 42 1 12.7425 5.3823 5.3471 43 1 10.4079 5.9149 5.7774 44 1 11.5874 0.5573 7.6523 45 1 11.3473 -1.7926 7.0242 46 1 10.5276 -2.4077 4.7898 47 1 9.9560 -0.6739 3.1496 48 1 6.0311 0.1677 0.3593 49 1 6.0305 0.1685 2.1395 50 1 3.7235 1.0764 2.1387 51 1 3.8043 -0.4633 1.2489 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475160_9818708.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:29 Heat of formation + Delta-G solvation = -86.617524 kcal Electronic energy + Delta-G solvation = -34003.932548 eV Core-core repulsion = 29449.440145 eV Total energy + Delta-G solvation = -4554.492403 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.177 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -42.49514 -41.79697 -40.88073 -39.12603 -37.94176 -37.52711 -37.38540 -35.43047 -34.15934 -32.08804 -31.83885 -30.98698 -30.17664 -29.04395 -28.38107 -25.80545 -24.66590 -23.99544 -23.60967 -22.63639 -21.95096 -21.65920 -20.92805 -20.43487 -18.70585 -18.52180 -18.26472 -18.16734 -17.79706 -17.66277 -17.40209 -17.03523 -16.41258 -16.34271 -15.85439 -15.50150 -15.43215 -15.27814 -15.02678 -14.94278 -14.71821 -14.62161 -14.40885 -14.25633 -14.05300 -14.00440 -13.84186 -13.49265 -13.47206 -13.33137 -13.08613 -12.74734 -12.63619 -12.52447 -12.44872 -12.37062 -12.35327 -11.90491 -11.81515 -11.72363 -11.64144 -11.54270 -11.34804 -11.03947 -10.42685 -10.23870 -10.09501 -9.03045 -8.53928 -4.96791 0.26400 0.78886 1.17979 1.35773 1.37243 1.39710 1.65633 1.68657 1.75643 2.02558 2.08070 3.09341 3.35644 3.36193 3.45229 3.48134 3.61040 3.68219 3.75526 3.77926 3.81486 3.85225 3.91478 4.06787 4.09880 4.12110 4.16222 4.17687 4.23498 4.25295 4.31505 4.36223 4.45369 4.46458 4.55595 4.62033 4.70102 4.77512 4.78769 4.83852 4.89864 4.93783 4.96633 4.98628 5.07963 5.12907 5.24779 5.29907 5.39815 5.63897 5.79484 5.84999 5.88766 6.13891 6.29848 6.36484 6.72444 6.83604 7.01093 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.463 3.537 4 O -0.504 6.504 5 C -0.080 4.080 6 H 0.112 0.888 7 C -0.101 4.101 8 C -0.124 4.124 9 C 0.142 3.858 10 H 0.091 0.909 11 N -0.726 5.726 12 C 0.491 3.509 13 O -0.509 6.509 14 C 0.091 3.909 15 N -0.466 5.466 16 C 0.065 3.935 17 C -0.151 4.151 18 C -0.033 4.033 19 O -0.545 6.545 20 Si 0.682 3.318 21 C -0.085 4.085 22 C -0.063 4.063 23 C -0.146 4.146 24 C -0.096 4.096 25 C -0.127 4.127 26 C 0.110 3.890 27 C -0.127 4.127 28 C -0.108 4.108 29 H 0.103 0.897 30 H 0.064 0.936 31 H 0.064 0.936 32 H 0.077 0.923 33 H 0.081 0.919 34 H 0.078 0.922 35 H 0.074 0.926 36 H 0.402 0.598 37 H 0.120 0.880 38 H 0.119 0.881 39 H 0.162 0.838 40 H 0.070 0.930 41 H 0.377 0.623 42 H -0.256 1.256 43 H -0.254 1.254 44 H 0.123 0.877 45 H 0.124 0.876 46 H 0.126 0.874 47 H 0.115 0.885 48 H 0.070 0.930 49 H 0.075 0.925 50 H 0.072 0.928 51 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.608 0.129 -3.623 5.115 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.391 6.391 5 C -0.099 4.099 6 H 0.130 0.870 7 C -0.139 4.139 8 C -0.162 4.162 9 C 0.038 3.962 10 H 0.110 0.890 11 N -0.379 5.379 12 C 0.274 3.726 13 O -0.382 6.382 14 C -0.035 4.035 15 N -0.149 5.149 16 C -0.060 4.060 17 C -0.158 4.158 18 C -0.144 4.144 19 O -0.351 6.351 20 Si 0.583 3.417 21 C -0.089 4.089 22 C -0.082 4.082 23 C -0.165 4.165 24 C -0.115 4.115 25 C -0.148 4.148 26 C 0.005 3.995 27 C -0.165 4.165 28 C -0.147 4.147 29 H 0.122 0.878 30 H 0.083 0.917 31 H 0.082 0.918 32 H 0.096 0.904 33 H 0.099 0.901 34 H 0.096 0.904 35 H 0.092 0.908 36 H 0.236 0.764 37 H 0.138 0.862 38 H 0.137 0.863 39 H 0.179 0.821 40 H 0.088 0.912 41 H 0.224 0.776 42 H -0.181 1.181 43 H -0.179 1.179 44 H 0.141 0.859 45 H 0.142 0.858 46 H 0.144 0.856 47 H 0.133 0.867 48 H 0.089 0.911 49 H 0.094 0.906 50 H 0.091 0.909 51 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 2.534 0.550 -4.284 5.008 hybrid contribution -0.237 -0.432 -0.760 0.905 sum 2.298 0.118 -5.043 5.544 Atomic orbital electron populations 1.23320 0.75921 1.04005 1.02721 1.86506 1.23742 1.33328 1.83884 1.23773 0.91994 0.81435 0.72196 1.90691 1.67182 1.36384 1.44885 1.21167 0.87076 0.99457 1.02248 0.87025 1.21395 0.94487 0.93520 1.04537 1.21811 0.95517 1.01591 0.97316 1.21088 0.78863 0.96377 0.99861 0.89043 1.46017 1.07549 1.75453 1.08837 1.20990 0.90074 0.77163 0.84347 1.90834 1.69698 1.46601 1.31074 1.21595 0.92149 1.06632 0.83136 1.43159 1.55980 1.04472 1.11297 1.21399 1.01622 0.91717 0.91282 1.19534 1.10400 0.91812 0.94092 1.23937 0.92641 1.07744 0.90070 1.86575 1.43061 1.74205 1.31220 0.95278 0.80646 0.78928 0.86826 1.18927 1.04316 0.92312 0.93384 1.20283 0.98157 0.91486 0.98242 1.20672 1.02847 0.95981 0.96956 1.20830 0.98696 0.98627 0.93354 1.19947 1.05429 0.88968 1.00423 1.18164 1.02034 0.87195 0.92084 1.21911 0.95024 0.96301 1.03295 1.21496 0.95381 1.01687 0.96101 0.87837 0.91732 0.91761 0.90409 0.90072 0.90351 0.90764 0.76412 0.86158 0.86289 0.82107 0.91242 0.77568 1.18062 1.17898 0.85885 0.85809 0.85635 0.86680 0.91103 0.90606 0.90901 0.89817 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.54 10.47 -39.26 -0.41 -0.95 16 3 C 0.46 0.91 7.25 36.01 0.26 1.17 16 4 O -0.50 -2.47 15.73 -18.74 -0.29 -2.77 16 5 C -0.08 0.08 2.63 -91.77 -0.24 -0.16 16 6 H 0.11 -0.31 8.14 -51.93 -0.42 -0.73 16 7 C -0.10 0.12 4.49 -26.73 -0.12 0.00 16 8 C -0.12 0.38 5.39 -26.73 -0.14 0.23 16 9 C 0.14 -0.18 2.45 -67.93 -0.17 -0.35 16 10 H 0.09 0.13 7.58 -51.93 -0.39 -0.26 16 11 N -0.73 1.66 5.08 -53.81 -0.27 1.39 16 12 C 0.49 0.45 7.86 -10.99 -0.09 0.37 16 13 O -0.51 -3.20 16.08 5.56 0.09 -3.11 16 14 C 0.09 -0.11 6.48 -5.20 -0.03 -0.14 16 15 N -0.47 -1.42 2.27 -115.71 -0.26 -1.69 16 16 C 0.06 0.24 9.89 -16.73 -0.17 0.08 16 17 C -0.15 -0.71 5.61 -102.71 -0.58 -1.28 16 18 C -0.03 -0.06 3.05 36.01 0.11 0.05 16 19 O -0.55 -1.36 12.86 -35.23 -0.45 -1.82 16 20 Si 0.68 -0.19 30.79 -169.99 -5.23 -5.42 16 21 C -0.09 -0.47 6.35 -105.14 -0.67 -1.14 16 22 C -0.06 -0.27 10.05 -39.65 -0.40 -0.66 16 23 C -0.15 -0.43 9.97 -39.94 -0.40 -0.83 16 24 C -0.10 -0.25 10.01 -39.54 -0.40 -0.64 16 25 C -0.13 -0.41 10.00 -39.43 -0.39 -0.80 16 26 C 0.11 0.51 6.80 -83.99 -0.57 -0.06 16 27 C -0.13 0.16 5.49 -26.73 -0.15 0.01 16 28 C -0.11 0.11 5.13 -26.73 -0.14 -0.03 16 29 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 30 H 0.06 0.00 8.13 -51.93 -0.42 -0.43 16 31 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 32 H 0.08 0.02 8.10 -51.93 -0.42 -0.40 16 33 H 0.08 -0.07 8.10 -51.93 -0.42 -0.49 16 34 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 35 H 0.07 -0.33 8.14 -51.93 -0.42 -0.75 16 36 H 0.40 -2.24 8.60 -40.82 -0.35 -2.59 16 37 H 0.12 -0.51 8.12 -51.93 -0.42 -0.93 16 38 H 0.12 -0.45 8.14 -51.93 -0.42 -0.87 16 39 H 0.16 0.30 6.30 -52.49 -0.33 -0.03 16 40 H 0.07 0.02 7.96 -51.93 -0.41 -0.39 16 41 H 0.38 -1.13 8.74 45.56 0.40 -0.73 16 42 H -0.26 -0.46 7.11 56.52 0.40 -0.06 16 43 H -0.25 -0.67 7.04 56.52 0.40 -0.27 16 44 H 0.12 0.33 8.06 -52.49 -0.42 -0.09 16 45 H 0.12 0.09 8.06 -52.49 -0.42 -0.33 16 46 H 0.13 0.03 8.06 -52.49 -0.42 -0.40 16 47 H 0.12 0.12 8.06 -52.49 -0.42 -0.30 16 48 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 49 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 50 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 51 H 0.08 -0.09 8.11 -51.93 -0.42 -0.51 16 LS Contribution 422.15 15.07 6.36 6.36 Total: 0.00 -13.30 422.15 -11.58 -24.88 By element: Atomic # 1 Polarization: -5.85 SS G_CDS: -7.89 Total: -13.74 kcal Atomic # 6 Polarization: 0.07 SS G_CDS: -3.21 Total: -3.14 kcal Atomic # 7 Polarization: 0.24 SS G_CDS: -0.54 Total: -0.30 kcal Atomic # 8 Polarization: -7.57 SS G_CDS: -1.07 Total: -8.64 kcal Atomic # 14 Polarization: -0.19 SS G_CDS: -5.23 Total: -5.42 kcal Total LS contribution 6.36 Total: 6.36 kcal Total: -13.30 -11.58 -24.88 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_9818708.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.735 kcal (2) G-P(sol) polarization free energy of solvation -13.305 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.040 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.578 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.883 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.618 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds