Wall clock time and date at job start Tue Mar 9 2021 12:54:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45207 * 1 3 3 C 1.34232 * 116.99265 * 2 1 4 4 O 1.20819 * 120.00141 * 359.97438 * 3 2 1 5 5 C 1.50704 * 119.99538 * 180.02562 * 3 2 1 6 6 H 1.08994 * 109.47095 * 59.99646 * 5 3 2 7 7 C 1.52999 * 109.46982 * 179.97438 * 5 3 2 8 8 C 1.53001 * 109.47127 * 179.97438 * 7 5 3 9 9 C 1.53004 * 109.46978 * 300.00004 * 8 7 5 10 10 H 1.09000 * 109.46985 * 300.00028 * 9 8 7 11 11 N 1.46496 * 109.46764 * 179.97438 * 9 8 7 12 12 C 1.34780 * 119.99877 * 155.00172 * 11 9 8 13 13 O 1.21281 * 119.99986 * 359.97438 * 12 11 9 14 14 C 1.50695 * 120.00071 * 179.97438 * 12 11 9 15 15 N 1.46501 * 109.47061 * 179.97438 * 14 12 11 16 16 C 1.36843 * 125.06192 * 265.02104 * 15 14 12 17 17 C 1.34233 * 109.93746 * 179.97438 * 16 15 14 18 18 C 1.50701 * 126.50253 * 179.97438 * 17 16 15 19 19 O 1.42901 * 109.47328 * 105.01940 * 18 17 16 20 20 Si 1.86305 * 109.46539 * 345.02178 * 18 17 16 21 21 C 1.46494 * 107.00095 * 359.97438 * 17 16 15 22 22 C 1.39592 * 134.03564 * 180.02562 * 21 17 16 23 23 C 1.36662 * 119.76435 * 180.25940 * 22 21 17 24 24 C 1.38796 * 120.52606 * 359.48003 * 23 22 21 25 25 C 1.37793 * 120.66403 * 0.50095 * 24 23 22 26 26 C 1.37694 * 125.06628 * 85.00360 * 15 14 12 27 27 C 1.52999 * 109.47195 * 60.00037 * 9 8 7 28 28 C 1.53001 * 109.47127 * 299.99872 * 27 9 8 29 29 H 1.09003 * 109.46536 * 179.97438 * 1 2 3 30 30 H 1.08992 * 109.47224 * 300.00094 * 1 2 3 31 31 H 1.08998 * 109.47049 * 60.00846 * 1 2 3 32 32 H 1.09000 * 109.47162 * 59.99591 * 7 5 3 33 33 H 1.08998 * 109.46860 * 299.99380 * 7 5 3 34 34 H 1.08994 * 109.47131 * 180.02562 * 8 7 5 35 35 H 1.09000 * 109.47285 * 59.99848 * 8 7 5 36 36 H 0.97005 * 120.00390 * 334.99757 * 11 9 8 37 37 H 1.08998 * 109.47431 * 60.00055 * 14 12 11 38 38 H 1.08996 * 109.47696 * 299.99848 * 14 12 11 39 39 H 1.08000 * 125.02789 * 359.94792 * 16 15 14 40 40 H 1.09002 * 109.47056 * 225.02715 * 18 17 16 41 41 H 0.96696 * 113.99520 * 180.02562 * 19 18 17 42 42 H 1.48494 * 110.00178 * 298.67964 * 20 18 17 43 43 H 1.48499 * 109.99999 * 60.00359 * 20 18 17 44 44 H 1.08002 * 120.11469 * 359.97438 * 22 21 17 45 45 H 1.07993 * 119.73486 * 179.70200 * 23 22 21 46 46 H 1.07993 * 119.66604 * 180.27103 * 24 23 22 47 47 H 1.08002 * 120.10512 * 179.78538 * 25 24 23 48 48 H 1.09000 * 109.47162 * 60.00099 * 27 9 8 49 49 H 1.09005 * 109.47249 * 180.02562 * 27 9 8 50 50 H 1.09000 * 109.47285 * 300.00152 * 28 27 9 51 51 H 1.08994 * 109.47131 * 179.97438 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5663 1.2750 -0.0006 6 1 3.9557 0.7811 -0.8907 7 6 4.0000 2.7423 -0.0011 8 6 5.5279 2.8225 -0.0011 9 6 6.0749 2.1294 1.2485 10 1 5.6851 2.6238 2.1383 11 7 7.5379 2.2056 1.2482 12 6 8.2163 2.1397 2.4109 13 8 7.6157 2.0177 3.4575 14 6 9.7213 2.2176 2.4106 15 7 10.2154 2.1242 3.7866 16 6 10.5145 3.1919 4.5886 17 6 10.9403 2.7598 5.7860 18 6 11.3675 3.6181 6.9488 19 8 10.3427 3.6154 7.9447 20 14 11.6568 5.3618 6.3600 21 6 10.9112 1.2956 5.7482 22 6 11.2305 0.2947 6.6673 23 6 11.0955 -1.0186 6.3144 24 6 10.6331 -1.3656 5.0526 25 6 10.3117 -0.3937 4.1301 26 6 10.4477 0.9491 4.4657 27 6 5.6412 0.6621 1.2490 28 6 4.1133 0.5819 1.2490 29 1 -0.3632 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8899 31 1 -0.3633 0.5137 -0.8900 32 1 3.6105 3.2366 0.8889 33 1 3.6100 3.2361 -0.8911 34 1 5.8369 3.8677 -0.0010 35 1 5.9177 2.3280 -0.8908 36 1 8.0183 2.3035 0.4112 37 1 10.0360 3.1662 1.9756 38 1 10.1276 1.3953 1.8218 39 1 10.4220 4.2286 4.3006 40 1 12.2889 3.2207 7.3745 41 1 10.5501 4.1492 8.7238 42 1 12.7425 5.3823 5.3471 43 1 10.4079 5.9149 5.7774 44 1 11.5874 0.5573 7.6523 45 1 11.3473 -1.7926 7.0242 46 1 10.5276 -2.4077 4.7898 47 1 9.9560 -0.6739 3.1496 48 1 6.0311 0.1677 0.3593 49 1 6.0305 0.1685 2.1395 50 1 3.7235 1.0764 2.1387 51 1 3.8043 -0.4633 1.2489 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14475160_9818708.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:27 Heat of formation + Delta-G solvation = -88.117187 kcal Electronic energy + Delta-G solvation = -34003.997578 eV Core-core repulsion = 29449.440145 eV Total energy + Delta-G solvation = -4554.557433 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.177 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -42.63696 -41.89589 -40.95533 -39.14944 -38.09795 -37.66022 -37.54304 -35.47547 -34.27516 -32.02209 -31.88042 -31.06837 -30.36020 -29.09787 -28.38251 -25.90417 -24.70296 -23.90929 -23.79192 -22.79031 -21.99660 -21.67131 -20.91412 -20.60545 -18.77673 -18.56292 -18.36014 -18.25971 -17.88497 -17.78725 -17.50898 -17.04861 -16.52173 -16.43612 -15.93888 -15.59409 -15.40018 -15.26253 -15.07582 -15.01408 -14.87749 -14.77154 -14.51100 -14.31716 -14.18570 -14.03001 -13.81932 -13.63082 -13.40041 -13.29431 -13.06202 -12.76191 -12.75761 -12.64272 -12.51756 -12.46080 -12.26720 -12.05040 -11.90569 -11.80502 -11.65444 -11.54647 -11.44986 -11.16221 -10.62734 -10.21785 -10.17887 -9.25206 -8.72832 -4.96227 0.04804 0.57520 1.03715 1.25127 1.33439 1.37425 1.58222 1.66356 1.69786 1.97950 2.09662 2.88523 3.40694 3.44357 3.47492 3.52608 3.58707 3.66376 3.71076 3.81698 3.85613 3.98443 4.01148 4.01783 4.12259 4.18531 4.21646 4.23016 4.23394 4.23552 4.26498 4.35087 4.35822 4.52308 4.54725 4.61994 4.63626 4.71525 4.71655 4.83687 4.86042 4.97207 5.01232 5.03469 5.07825 5.17360 5.20639 5.29859 5.39393 5.44882 5.59141 5.65989 5.66774 6.05542 6.16477 6.41079 6.59524 6.98760 7.08340 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.362 6.362 3 C 0.461 3.539 4 O -0.541 6.541 5 C -0.073 4.073 6 H 0.141 0.859 7 C -0.100 4.100 8 C -0.112 4.112 9 C 0.143 3.857 10 H 0.056 0.944 11 N -0.705 5.705 12 C 0.490 3.510 13 O -0.572 6.572 14 C 0.086 3.914 15 N -0.467 5.467 16 C 0.053 3.947 17 C -0.182 4.182 18 C -0.052 4.052 19 O -0.571 6.571 20 Si 0.788 3.212 21 C -0.120 4.120 22 C -0.083 4.083 23 C -0.152 4.152 24 C -0.102 4.102 25 C -0.135 4.135 26 C 0.090 3.910 27 C -0.118 4.118 28 C -0.104 4.104 29 H 0.129 0.871 30 H 0.057 0.943 31 H 0.062 0.938 32 H 0.053 0.947 33 H 0.081 0.919 34 H 0.083 0.917 35 H 0.104 0.896 36 H 0.422 0.578 37 H 0.155 0.845 38 H 0.151 0.849 39 H 0.174 0.826 40 H 0.080 0.920 41 H 0.398 0.602 42 H -0.281 1.281 43 H -0.295 1.295 44 H 0.127 0.873 45 H 0.143 0.857 46 H 0.151 0.849 47 H 0.135 0.865 48 H 0.096 0.904 49 H 0.050 0.950 50 H 0.051 0.949 51 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.813 -0.421 -5.707 7.477 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.278 6.278 3 C 0.305 3.695 4 O -0.431 6.431 5 C -0.092 4.092 6 H 0.159 0.841 7 C -0.139 4.139 8 C -0.149 4.149 9 C 0.038 3.962 10 H 0.074 0.926 11 N -0.358 5.358 12 C 0.276 3.724 13 O -0.450 6.450 14 C -0.038 4.038 15 N -0.150 5.150 16 C -0.073 4.073 17 C -0.189 4.189 18 C -0.161 4.161 19 O -0.380 6.380 20 Si 0.692 3.308 21 C -0.124 4.124 22 C -0.101 4.101 23 C -0.170 4.170 24 C -0.121 4.121 25 C -0.155 4.155 26 C -0.015 4.015 27 C -0.156 4.156 28 C -0.142 4.142 29 H 0.147 0.853 30 H 0.076 0.924 31 H 0.081 0.919 32 H 0.072 0.928 33 H 0.100 0.900 34 H 0.102 0.898 35 H 0.122 0.878 36 H 0.261 0.739 37 H 0.172 0.828 38 H 0.168 0.832 39 H 0.191 0.809 40 H 0.098 0.902 41 H 0.248 0.752 42 H -0.208 1.208 43 H -0.223 1.223 44 H 0.145 0.855 45 H 0.161 0.839 46 H 0.168 0.832 47 H 0.153 0.847 48 H 0.115 0.885 49 H 0.069 0.931 50 H 0.070 0.930 51 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 3.760 -0.021 -6.395 7.419 hybrid contribution -0.709 -0.313 -0.118 0.784 sum 3.051 -0.334 -6.513 7.200 Atomic orbital electron populations 1.23519 0.75126 1.05626 1.02352 1.86509 1.24689 1.33109 1.83536 1.24399 0.93106 0.81002 0.70965 1.90672 1.68173 1.37486 1.46719 1.21252 0.85033 0.99792 1.03144 0.84098 1.21372 0.95834 0.93236 1.03419 1.21737 0.93869 1.02081 0.97253 1.20999 0.79365 0.96363 0.99464 0.92584 1.45829 1.07153 1.73783 1.09019 1.21394 0.90973 0.76005 0.84053 1.90819 1.70993 1.49764 1.33383 1.22002 0.90418 1.09792 0.81632 1.43380 1.55382 1.03692 1.12553 1.21701 1.01505 0.92530 0.91544 1.20055 1.11236 0.92163 0.95451 1.24337 0.92605 1.09498 0.89618 1.86515 1.43862 1.75205 1.32465 0.94136 0.76853 0.75352 0.84478 1.19359 1.05410 0.93203 0.94447 1.20495 0.99000 0.92107 0.98541 1.20981 1.02383 0.95967 0.97708 1.21200 0.98004 0.99849 0.93075 1.20270 1.05169 0.88545 1.01541 1.18485 1.02368 0.88242 0.92361 1.21822 0.94467 0.96121 1.03235 1.21430 0.95720 1.01652 0.95400 0.85253 0.92422 0.91875 0.92797 0.90005 0.89806 0.87753 0.73934 0.82755 0.83180 0.80915 0.90246 0.75150 1.20762 1.22274 0.85515 0.83888 0.83169 0.84672 0.88512 0.93102 0.93049 0.89394 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 113.37 1.20 1.19 16 2 O -0.36 -1.18 10.47 -51.44 -0.54 -1.72 16 3 C 0.46 2.12 7.25 71.24 0.52 2.64 16 4 O -0.54 -6.13 15.73 21.99 0.35 -5.79 16 5 C -0.07 0.17 2.63 -11.54 -0.03 0.14 16 6 H 0.14 -1.12 8.14 -2.39 -0.02 -1.14 16 7 C -0.10 0.23 4.49 30.59 0.14 0.37 16 8 C -0.11 0.82 5.39 30.60 0.16 0.99 16 9 C 0.14 -0.36 2.45 44.99 0.11 -0.25 16 10 H 0.06 0.30 7.58 -2.39 -0.02 0.28 16 11 N -0.70 3.97 5.08 -442.54 -2.25 1.72 16 12 C 0.49 0.95 7.86 87.65 0.69 1.64 16 13 O -0.57 -8.37 16.08 -3.03 -0.05 -8.42 16 14 C 0.09 -0.29 6.48 85.63 0.56 0.26 16 15 N -0.47 -3.15 2.27 -520.00 -1.18 -4.33 16 16 C 0.05 0.46 9.89 83.00 0.82 1.29 16 17 C -0.18 -2.04 5.61 -18.63 -0.10 -2.14 16 18 C -0.05 -0.25 3.05 71.24 0.22 -0.04 16 19 O -0.57 -3.70 12.86 -148.98 -1.92 -5.62 16 20 Si 0.79 -0.15 30.79 68.60 2.11 1.96 16 21 C -0.12 -1.57 6.35 -20.20 -0.13 -1.70 16 22 C -0.08 -0.85 10.05 22.23 0.22 -0.63 16 23 C -0.15 -1.01 9.97 22.03 0.22 -0.79 16 24 C -0.10 -0.54 10.01 22.30 0.22 -0.31 16 25 C -0.13 -0.90 10.00 22.37 0.22 -0.68 16 26 C 0.09 0.95 6.80 39.03 0.27 1.22 16 27 C -0.12 0.32 5.49 30.59 0.17 0.49 16 28 C -0.10 0.14 5.13 30.60 0.16 0.30 16 29 H 0.13 -0.77 8.14 -2.39 -0.02 -0.79 16 30 H 0.06 0.06 8.13 -2.39 -0.02 0.05 16 31 H 0.06 0.00 8.13 -2.39 -0.02 -0.02 16 32 H 0.05 0.14 8.10 -2.39 -0.02 0.12 16 33 H 0.08 -0.17 8.10 -2.39 -0.02 -0.18 16 34 H 0.08 -0.64 8.14 -2.39 -0.02 -0.66 16 35 H 0.10 -1.32 8.14 -2.39 -0.02 -1.34 16 36 H 0.42 -5.87 8.60 -92.70 -0.80 -6.66 16 37 H 0.15 -1.64 8.12 -2.39 -0.02 -1.66 16 38 H 0.15 -1.48 8.14 -2.39 -0.02 -1.50 16 39 H 0.17 0.83 6.30 -2.91 -0.02 0.81 16 40 H 0.08 0.14 7.96 -2.39 -0.02 0.12 16 41 H 0.40 -2.05 8.74 -74.06 -0.65 -2.70 16 42 H -0.28 -1.04 7.11 99.48 0.71 -0.34 16 43 H -0.30 -1.89 7.04 99.48 0.70 -1.19 16 44 H 0.13 0.97 8.06 -2.91 -0.02 0.95 16 45 H 0.14 0.23 8.06 -2.91 -0.02 0.20 16 46 H 0.15 -0.09 8.06 -2.91 -0.02 -0.12 16 47 H 0.14 0.18 8.06 -2.91 -0.02 0.16 16 48 H 0.10 -0.74 8.14 -2.39 -0.02 -0.76 16 49 H 0.05 0.16 8.14 -2.38 -0.02 0.14 16 50 H 0.05 0.15 8.14 -2.39 -0.02 0.13 16 51 H 0.09 -0.18 8.11 -2.39 -0.02 -0.20 16 Total: 0.00 -36.19 422.15 1.70 -34.50 By element: Atomic # 1 Polarization: -15.84 SS G_CDS: -0.46 Total: -16.30 kcal Atomic # 6 Polarization: -1.64 SS G_CDS: 5.63 Total: 3.99 kcal Atomic # 7 Polarization: 0.82 SS G_CDS: -3.43 Total: -2.61 kcal Atomic # 8 Polarization: -19.39 SS G_CDS: -2.16 Total: -21.54 kcal Atomic # 14 Polarization: -0.15 SS G_CDS: 2.11 Total: 1.96 kcal Total: -36.19 1.70 -34.50 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_9818708.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.620 kcal (2) G-P(sol) polarization free energy of solvation -36.194 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.814 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.697 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.497 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.117 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds