Wall clock time and date at job start Tue Mar 9 2021 12:59:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50708 * 1 3 3 C 1.37865 * 126.45514 * 2 1 4 4 C 1.46674 * 126.23675 * 359.97438 * 3 2 1 5 5 O 1.21695 * 120.00339 * 359.97438 * 4 3 2 6 6 N 1.34784 * 119.99994 * 179.71627 * 4 3 2 7 7 C 1.46499 * 119.99971 * 179.97438 * 6 4 3 8 8 H 1.09007 * 109.46956 * 325.00197 * 7 6 4 9 9 C 1.52995 * 109.47022 * 84.99732 * 7 6 4 10 10 C 1.53005 * 109.47228 * 179.97438 * 9 7 6 11 11 C 1.52999 * 109.47076 * 300.00529 * 10 9 7 12 12 H 1.08996 * 109.46825 * 299.99460 * 11 10 9 13 13 C 1.53005 * 109.47076 * 180.02562 * 11 10 9 14 14 C 1.52995 * 109.47228 * 59.99471 * 13 11 10 15 15 C 1.52999 * 109.47076 * 180.02562 * 13 11 10 16 16 C 1.52996 * 109.47151 * 59.99647 * 11 10 9 17 17 C 1.52999 * 109.47155 * 205.00183 * 7 6 4 18 18 N 1.37661 * 107.53119 * 179.71903 * 3 2 1 19 19 C 1.35532 * 108.64366 * 0.25875 * 18 3 2 20 20 C 1.50702 * 125.56348 * 179.97438 * 19 18 3 21 21 O 1.42895 * 109.46905 * 300.00075 * 20 19 18 22 22 Si 1.86303 * 109.46940 * 180.02562 * 20 19 18 23 23 C 1.35461 * 108.87094 * 0.02562 * 19 18 3 24 24 H 1.09002 * 109.47192 * 89.99901 * 1 2 3 25 25 H 1.08996 * 109.47031 * 210.00136 * 1 2 3 26 26 H 1.08995 * 109.46792 * 330.00195 * 1 2 3 27 27 H 0.96999 * 120.00044 * 0.02562 * 6 4 3 28 28 H 1.09001 * 109.47831 * 300.00098 * 9 7 6 29 29 H 1.08996 * 109.47227 * 60.00172 * 9 7 6 30 30 H 1.08996 * 109.47630 * 180.02562 * 10 9 7 31 31 H 1.09007 * 109.46829 * 60.00417 * 10 9 7 32 32 H 1.09001 * 109.46476 * 299.99720 * 13 11 10 33 33 H 1.08999 * 109.47672 * 300.00652 * 14 13 11 34 34 H 1.09003 * 109.46913 * 59.99961 * 14 13 11 35 35 H 1.08996 * 109.47285 * 179.97438 * 14 13 11 36 36 H 1.08996 * 109.47227 * 59.99342 * 15 13 11 37 37 H 1.08996 * 109.47133 * 180.02562 * 15 13 11 38 38 H 1.09003 * 109.46786 * 299.99868 * 15 13 11 39 39 H 1.09006 * 109.46787 * 180.02562 * 16 11 10 40 40 H 1.09003 * 109.47095 * 60.00411 * 16 11 10 41 41 H 1.08996 * 109.46825 * 299.99663 * 17 7 6 42 42 H 1.08993 * 109.47204 * 60.00070 * 17 7 6 43 43 H 0.97001 * 125.67639 * 180.29788 * 18 3 2 44 44 H 1.08997 * 109.46864 * 60.00053 * 20 19 18 45 45 H 0.96703 * 114.00187 * 299.99827 * 21 20 19 46 46 H 1.48499 * 109.99964 * 58.68027 * 22 20 19 47 47 H 1.48500 * 109.99967 * 179.97438 * 22 20 19 48 48 H 1.07996 * 126.06549 * 179.97438 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8899 2.5092 -0.0005 5 8 0.7027 2.7766 -0.0015 6 7 2.8038 3.4999 0.0053 7 6 2.3679 4.8985 0.0042 8 1 1.4593 4.9955 -0.5901 9 6 2.0883 5.3467 1.4401 10 6 1.6337 6.8076 1.4391 11 6 2.7339 7.6836 0.8364 12 1 3.6423 7.5863 1.4308 13 6 2.2795 9.1447 0.8359 14 6 2.0004 9.5924 2.2720 15 6 3.3794 10.0206 0.2326 16 6 3.0134 7.2354 -0.5995 17 6 3.4676 5.7749 -0.5987 18 7 3.6284 0.6624 0.0064 19 6 3.6218 -0.6929 0.0046 20 6 4.8434 -1.5753 0.0094 21 8 5.6298 -1.3066 -1.1531 22 14 4.3183 -3.3628 0.0036 23 6 2.3379 -1.1247 -0.0035 24 1 -0.3634 0.0000 -1.0277 25 1 -0.3633 -0.8899 0.5138 26 1 -0.3633 0.8900 0.5138 27 1 3.7501 3.2868 0.0095 28 1 1.3049 4.7223 1.8697 29 1 2.9969 5.2497 2.0344 30 1 1.4350 7.1271 2.4620 31 1 0.7252 6.9050 0.8447 32 1 1.3709 9.2423 0.2418 33 1 1.2167 8.9683 2.7014 34 1 2.9090 9.4946 2.8662 35 1 1.6771 10.6333 2.2717 36 1 3.5778 9.7014 -0.7905 37 1 3.0559 11.0614 0.2327 38 1 4.2882 9.9229 0.8264 39 1 3.7975 7.8593 -1.0287 40 1 2.1049 7.3328 -1.1939 41 1 4.3761 5.6780 -0.0044 42 1 3.6667 5.4557 -1.6216 43 1 4.4191 1.2243 0.0120 44 1 5.4344 -1.3728 0.9026 45 1 5.1663 -1.4655 -1.9868 46 1 3.4854 -3.6436 -1.1934 47 1 5.5139 -4.2435 0.0077 48 1 2.0137 -2.1549 -0.0072 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589126_13940406.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:20 Heat of formation + Delta-G solvation = -52.545880 kcal Electronic energy + Delta-G solvation = -25912.918509 eV Core-core repulsion = 22354.634891 eV Total energy + Delta-G solvation = -3558.283618 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.193 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.62421 -40.93525 -39.59296 -37.86710 -36.76117 -34.40157 -33.42860 -31.95608 -31.75062 -29.57620 -28.18543 -28.02955 -26.76689 -24.10399 -23.51521 -22.35890 -21.61851 -21.33940 -20.68419 -20.32308 -19.49559 -18.18007 -17.43323 -16.80512 -16.58823 -16.22495 -15.93538 -15.47200 -15.38111 -15.22153 -15.06256 -14.83588 -14.52235 -14.43315 -14.27117 -14.16758 -13.88592 -13.63236 -13.58043 -13.41674 -13.09392 -13.00615 -12.79045 -12.69629 -12.33844 -12.27431 -12.12884 -12.07221 -11.87143 -11.65149 -11.35180 -11.30066 -11.03765 -10.94460 -10.79907 -10.20559 -9.83883 -9.21215 -4.83991 0.29021 1.21684 1.52941 1.69392 1.88708 2.00371 2.21419 2.24377 3.33294 3.54810 3.59743 3.65272 3.71401 3.84676 3.99405 4.08457 4.13334 4.22683 4.26072 4.29864 4.34743 4.47303 4.49334 4.50461 4.62426 4.64970 4.70920 4.76249 4.80540 4.81430 4.88268 4.97360 4.99150 5.01072 5.05790 5.11551 5.14372 5.15995 5.17393 5.26032 5.29343 5.34999 5.36671 5.44925 5.53098 5.60307 5.62463 5.84239 6.29449 6.38642 6.46955 7.06409 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C -0.086 4.086 3 C -0.070 4.070 4 C 0.586 3.414 5 O -0.562 6.562 6 N -0.716 5.716 7 C 0.149 3.851 8 H 0.066 0.934 9 C -0.122 4.122 10 C -0.110 4.110 11 C -0.077 4.077 12 H 0.075 0.925 13 C -0.092 4.092 14 C -0.151 4.151 15 C -0.149 4.149 16 C -0.111 4.111 17 C -0.118 4.118 18 N -0.513 5.513 19 C 0.036 3.964 20 C -0.062 4.062 21 O -0.548 6.548 22 Si 0.794 3.206 23 C -0.207 4.207 24 H 0.064 0.936 25 H 0.082 0.918 26 H 0.060 0.940 27 H 0.406 0.594 28 H 0.044 0.956 29 H 0.072 0.928 30 H 0.070 0.930 31 H 0.055 0.945 32 H 0.064 0.936 33 H 0.056 0.944 34 H 0.055 0.945 35 H 0.052 0.948 36 H 0.061 0.939 37 H 0.051 0.949 38 H 0.055 0.945 39 H 0.081 0.919 40 H 0.058 0.942 41 H 0.082 0.918 42 H 0.072 0.928 43 H 0.427 0.573 44 H 0.136 0.864 45 H 0.389 0.611 46 H -0.283 1.283 47 H -0.297 1.297 48 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.981 -0.083 1.497 4.254 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.095 4.095 3 C -0.183 4.183 4 C 0.375 3.625 5 O -0.441 6.441 6 N -0.367 5.367 7 C 0.045 3.955 8 H 0.085 0.915 9 C -0.161 4.161 10 C -0.148 4.148 11 C -0.095 4.095 12 H 0.093 0.907 13 C -0.110 4.110 14 C -0.208 4.208 15 C -0.206 4.206 16 C -0.149 4.149 17 C -0.156 4.156 18 N -0.111 5.111 19 C -0.083 4.083 20 C -0.171 4.171 21 O -0.356 6.356 22 Si 0.697 3.303 23 C -0.231 4.231 24 H 0.083 0.917 25 H 0.101 0.899 26 H 0.079 0.921 27 H 0.242 0.758 28 H 0.063 0.937 29 H 0.091 0.909 30 H 0.089 0.911 31 H 0.073 0.927 32 H 0.082 0.918 33 H 0.075 0.925 34 H 0.074 0.926 35 H 0.071 0.929 36 H 0.080 0.920 37 H 0.070 0.930 38 H 0.075 0.925 39 H 0.100 0.900 40 H 0.077 0.923 41 H 0.101 0.899 42 H 0.091 0.909 43 H 0.267 0.733 44 H 0.153 0.847 45 H 0.239 0.761 46 H -0.209 1.209 47 H -0.225 1.225 48 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 3.731 -0.308 1.511 4.037 hybrid contribution 0.732 0.764 -1.110 1.534 sum 4.463 0.456 0.401 4.504 Atomic orbital electron populations 1.20334 0.89222 1.03017 1.02152 1.20172 0.96302 0.91322 1.01722 1.20160 0.84523 0.93107 1.20553 1.17238 0.85676 0.83749 0.75813 1.90815 1.17569 1.83762 1.51917 1.45894 1.09573 1.06059 1.75174 1.21011 0.98508 0.79098 0.96877 0.91535 1.21838 1.01381 0.96690 0.96154 1.21581 0.98396 0.93328 1.01541 1.21189 0.98363 0.93647 0.96337 0.90667 1.21124 0.98776 0.94362 0.96772 1.21905 1.01689 1.01006 0.96210 1.21896 0.98423 0.99251 1.01072 1.21585 1.01925 0.94749 0.96665 1.21755 0.97568 0.94826 1.01479 1.41808 1.06762 1.06754 1.55751 1.21231 0.97001 0.83316 1.06716 1.25078 0.91314 1.08995 0.91704 1.86573 1.42641 1.89629 1.16760 0.93295 0.79026 0.70249 0.87745 1.20828 0.90871 0.99520 1.11905 0.91742 0.89902 0.92098 0.75783 0.93683 0.90928 0.91101 0.92653 0.91796 0.92518 0.92572 0.92898 0.91989 0.93000 0.92542 0.90042 0.92274 0.89950 0.90916 0.73322 0.84675 0.76101 1.20950 1.22509 0.81581 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.48 9.83 71.24 0.70 0.22 16 2 C -0.09 -0.45 6.21 -19.56 -0.12 -0.58 16 3 C -0.07 -0.31 7.06 40.34 0.28 -0.03 16 4 C 0.59 4.09 7.75 86.44 0.67 4.76 16 5 O -0.56 -8.18 14.47 -4.33 -0.06 -8.24 16 6 N -0.72 -0.13 5.07 -446.50 -2.27 -2.39 16 7 C 0.15 0.11 2.45 44.99 0.11 0.22 16 8 H 0.07 0.41 7.58 -2.38 -0.02 0.39 16 9 C -0.12 -0.14 5.49 30.59 0.17 0.03 16 10 C -0.11 0.02 4.85 30.60 0.15 0.17 16 11 C -0.08 0.20 1.77 -10.79 -0.02 0.18 16 12 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 13 C -0.09 0.17 2.51 -10.79 -0.03 0.14 16 14 C -0.15 0.21 8.84 71.98 0.64 0.85 16 15 C -0.15 0.39 8.84 71.98 0.64 1.02 16 16 C -0.11 0.38 4.85 30.58 0.15 0.53 16 17 C -0.12 0.48 5.39 30.58 0.16 0.64 16 18 N -0.51 0.83 5.99 -171.93 -1.03 -0.20 16 19 C 0.04 -0.06 6.47 41.35 0.27 0.21 16 20 C -0.06 0.28 3.08 71.24 0.22 0.50 16 21 O -0.55 1.06 12.88 -148.98 -1.92 -0.86 16 22 Si 0.79 -3.74 30.54 68.60 2.10 -1.64 16 23 C -0.21 -0.11 9.27 22.01 0.20 0.10 16 24 H 0.06 0.36 8.14 -2.39 -0.02 0.34 16 25 H 0.08 0.10 8.14 -2.39 -0.02 0.08 16 26 H 0.06 0.59 6.49 -2.39 -0.02 0.58 16 27 H 0.41 -2.37 7.73 -92.71 -0.72 -3.08 16 28 H 0.04 0.29 8.14 -2.39 -0.02 0.27 16 29 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 30 H 0.07 -0.02 6.43 -2.39 -0.02 -0.04 16 31 H 0.05 0.11 8.14 -2.38 -0.02 0.09 16 32 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 33 H 0.06 -0.06 6.43 -2.39 -0.02 -0.07 16 34 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 35 H 0.05 -0.05 8.14 -2.39 -0.02 -0.07 16 36 H 0.06 -0.21 6.43 -2.39 -0.02 -0.22 16 37 H 0.05 -0.10 8.14 -2.39 -0.02 -0.11 16 38 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 39 H 0.08 -0.39 6.43 -2.38 -0.02 -0.40 16 40 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 41 H 0.08 -0.53 8.14 -2.39 -0.02 -0.55 16 42 H 0.07 -0.31 8.14 -2.39 -0.02 -0.32 16 43 H 0.43 -2.87 8.19 -92.71 -0.76 -3.63 16 44 H 0.14 -0.98 7.96 -2.39 -0.02 -0.99 16 45 H 0.39 -2.48 8.70 -74.06 -0.64 -3.12 16 46 H -0.28 -0.04 7.11 99.48 0.71 0.67 16 47 H -0.30 -0.74 7.11 99.48 0.71 -0.03 16 48 H 0.17 -0.62 6.17 -2.91 -0.02 -0.64 16 Total: 0.00 -15.93 370.35 -0.10 -16.04 By element: Atomic # 1 Polarization: -10.54 SS G_CDS: -1.11 Total: -11.65 kcal Atomic # 6 Polarization: 4.76 SS G_CDS: 4.19 Total: 8.95 kcal Atomic # 7 Polarization: 0.70 SS G_CDS: -3.30 Total: -2.59 kcal Atomic # 8 Polarization: -7.12 SS G_CDS: -1.98 Total: -9.10 kcal Atomic # 14 Polarization: -3.74 SS G_CDS: 2.10 Total: -1.64 kcal Total: -15.93 -0.10 -16.04 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_13940406.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.511 kcal (2) G-P(sol) polarization free energy of solvation -15.934 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.445 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.101 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.035 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.546 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds