Wall clock time and date at job start Tue Mar 9 2021 13:03:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.45197 * 109.47216 * 2 1 4 4 C 1.34234 * 117.00155 * 180.02562 * 3 2 1 5 5 O 1.20830 * 119.99655 * 0.02562 * 4 3 2 6 6 C 1.50696 * 120.00350 * 180.02562 * 4 3 2 7 7 H 1.08994 * 109.47399 * 59.99795 * 6 4 3 8 8 C 1.53000 * 109.47532 * 180.02562 * 6 4 3 9 9 C 1.52995 * 109.47574 * 179.97438 * 8 6 4 10 10 C 1.53005 * 109.46917 * 300.00168 * 9 8 6 11 11 H 1.08996 * 109.47189 * 299.99369 * 10 9 8 12 12 N 1.46506 * 109.46804 * 179.97438 * 10 9 8 13 13 C 1.34773 * 119.99745 * 154.99763 * 12 10 9 14 14 O 1.21636 * 120.00036 * 359.97438 * 13 12 10 15 15 C 1.47262 * 120.00078 * 179.97438 * 13 12 10 16 16 C 1.36774 * 126.93802 * 0.30550 * 15 13 12 17 17 N 1.34664 * 108.39265 * 180.15993 * 16 15 13 18 18 C 1.46499 * 124.84980 * 179.82889 * 17 16 15 19 19 C 1.36451 * 110.29936 * 359.57028 * 17 16 15 20 20 C 1.50694 * 125.57257 * 180.24528 * 19 17 16 21 21 O 1.42902 * 109.47212 * 329.99548 * 20 19 17 22 22 Si 1.86303 * 109.46969 * 209.99667 * 20 19 17 23 23 C 1.34489 * 108.85441 * 0.25975 * 19 17 16 24 24 C 1.52996 * 109.47427 * 59.99755 * 10 9 8 25 25 C 1.53004 * 109.47315 * 300.00199 * 24 10 9 26 26 H 1.09006 * 109.46751 * 299.99818 * 1 2 3 27 27 H 1.08998 * 109.47312 * 59.99215 * 1 2 3 28 28 H 1.08993 * 109.47435 * 179.97438 * 1 2 3 29 29 H 1.09007 * 109.46976 * 240.00680 * 2 1 3 30 30 H 1.08998 * 109.47312 * 120.00785 * 2 1 3 31 31 H 1.09008 * 109.46955 * 59.99408 * 8 6 4 32 32 H 1.08996 * 109.46900 * 300.00195 * 8 6 4 33 33 H 1.08993 * 109.47337 * 179.97438 * 9 8 6 34 34 H 1.09003 * 109.46678 * 59.99483 * 9 8 6 35 35 H 0.96993 * 120.00032 * 334.99534 * 12 10 9 36 36 H 1.07997 * 125.80548 * 359.97438 * 16 15 13 37 37 H 1.09002 * 109.47391 * 269.69950 * 18 17 16 38 38 H 1.09001 * 109.46813 * 149.70006 * 18 17 16 39 39 H 1.09004 * 109.47041 * 29.70134 * 18 17 16 40 40 H 1.09002 * 109.46981 * 89.99556 * 20 19 17 41 41 H 0.96705 * 114.00053 * 300.00235 * 21 20 19 42 42 H 1.48498 * 109.99987 * 58.68364 * 22 20 19 43 43 H 1.48500 * 109.99591 * 179.97438 * 22 20 19 44 44 H 1.07996 * 126.82902 * 179.97438 * 23 19 17 45 45 H 1.09010 * 109.47172 * 59.99708 * 24 10 9 46 46 H 1.08996 * 109.47191 * 179.97438 * 24 10 9 47 47 H 1.09003 * 109.46516 * 300.00273 * 25 24 10 48 48 H 1.08993 * 109.47380 * 179.97438 * 25 24 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3448 1.5448 -0.0005 5 8 4.0808 0.5865 -0.0015 6 6 3.9208 2.9373 0.0000 7 1 3.5854 3.4690 0.8904 8 6 5.4487 2.8573 -0.0014 9 6 6.0336 4.2710 -0.0015 10 6 5.5609 5.0184 -1.2501 11 1 5.8960 4.4866 -2.1405 12 7 6.1204 6.3724 -1.2499 13 6 6.2830 7.0345 -2.4124 14 8 5.9656 6.5078 -3.4619 15 6 6.8449 8.3957 -2.4122 16 6 7.2525 9.1165 -1.3236 17 7 7.6996 10.3132 -1.7495 18 6 8.2191 11.3709 -0.8791 19 6 7.6050 10.3977 -3.1081 20 6 8.0143 11.5833 -3.9434 21 8 7.8494 12.7817 -3.1825 22 14 6.9490 11.6652 -5.4696 23 6 7.0863 9.2500 -3.5799 24 6 4.0330 5.0985 -1.2487 25 6 3.4481 3.6847 -1.2486 26 1 -0.3633 0.5138 0.8901 27 1 -0.3634 0.5139 -0.8899 28 1 -0.3634 -1.0276 -0.0005 29 1 1.8933 -0.5138 -0.8901 30 1 1.8934 -0.5139 0.8899 31 1 5.7839 2.3257 -0.8921 32 1 5.7854 2.3245 0.8878 33 1 7.1220 4.2140 -0.0021 34 1 5.6984 4.8029 0.8890 35 1 6.3739 6.7923 -0.4130 36 1 7.2186 8.7838 -0.2967 37 1 7.4016 12.0239 -0.5731 38 1 8.9656 11.9525 -1.4200 39 1 8.6765 10.9234 0.0033 40 1 9.0594 11.4789 -4.2349 41 1 6.9417 12.9394 -2.8888 42 1 5.5189 11.7757 -5.0854 43 1 7.3424 12.8307 -6.3015 44 1 6.8868 9.0062 -4.6129 45 1 3.6978 5.6304 -0.3582 46 1 3.6963 5.6313 -2.1380 47 1 3.7833 3.1528 -2.1391 48 1 2.3597 3.7418 -1.2471 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_13287730.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:03:30 Heat of formation + Delta-G solvation = -116.844366 kcal Electronic energy + Delta-G solvation = -29097.414766 eV Core-core repulsion = 24926.290050 eV Total energy + Delta-G solvation = -4171.124716 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -42.48387 -41.69612 -40.48367 -38.81092 -37.93243 -37.45305 -35.13568 -33.83421 -32.75966 -31.85575 -31.80215 -30.49662 -27.69820 -26.39871 -25.39721 -23.99796 -23.81767 -23.10419 -21.78348 -21.19273 -20.79578 -20.36136 -19.10480 -18.57545 -17.68537 -17.51599 -17.46269 -16.98041 -16.89514 -16.82473 -15.93628 -15.71386 -15.45539 -15.43659 -15.12747 -14.89057 -14.84513 -14.54761 -14.39550 -14.10723 -14.04329 -13.81735 -13.55318 -13.46523 -13.33293 -13.26934 -13.20484 -12.87933 -12.72401 -12.48767 -12.38254 -12.33842 -12.22942 -11.94579 -11.61095 -11.45581 -11.38079 -11.19575 -10.99544 -10.69720 -9.95727 -9.57351 -9.22195 -4.92865 0.76429 1.03926 1.27554 1.44374 1.64678 1.69906 1.78375 2.02976 2.30813 2.71448 3.08252 3.48797 3.52317 3.56172 3.64497 3.73245 3.77524 3.92232 3.99341 4.02970 4.07347 4.09288 4.14948 4.22143 4.26656 4.32450 4.34093 4.39042 4.40578 4.45384 4.49653 4.62580 4.69607 4.78048 4.83180 4.85850 4.97429 4.98643 4.99763 5.04021 5.08761 5.11665 5.24709 5.31489 5.53747 5.59109 5.69753 5.94607 6.12249 6.20248 6.68886 6.82668 7.49726 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.080 4.080 7 H 0.110 0.890 8 C -0.101 4.101 9 C -0.125 4.125 10 C 0.144 3.856 11 H 0.092 0.908 12 N -0.729 5.729 13 C 0.592 3.408 14 O -0.540 6.540 15 C -0.226 4.226 16 C 0.050 3.950 17 N -0.427 5.427 18 C 0.066 3.934 19 C -0.022 4.022 20 C -0.049 4.049 21 O -0.535 6.535 22 Si 0.711 3.289 23 C -0.130 4.130 24 C -0.127 4.127 25 C -0.108 4.108 26 H 0.067 0.933 27 H 0.067 0.933 28 H 0.081 0.919 29 H 0.070 0.930 30 H 0.070 0.930 31 H 0.077 0.923 32 H 0.079 0.921 33 H 0.078 0.922 34 H 0.071 0.929 35 H 0.396 0.604 36 H 0.170 0.830 37 H 0.075 0.925 38 H 0.099 0.901 39 H 0.082 0.918 40 H 0.122 0.878 41 H 0.376 0.624 42 H -0.257 1.257 43 H -0.254 1.254 44 H 0.158 0.842 45 H 0.068 0.932 46 H 0.077 0.923 47 H 0.072 0.928 48 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.306 2.731 4.189 5.010 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.394 6.394 6 C -0.099 4.099 7 H 0.128 0.872 8 C -0.139 4.139 9 C -0.163 4.163 10 C 0.040 3.960 11 H 0.110 0.890 12 N -0.380 5.380 13 C 0.381 3.619 14 O -0.417 6.417 15 C -0.237 4.237 16 C -0.087 4.087 17 N -0.102 5.102 18 C -0.075 4.075 19 C -0.131 4.131 20 C -0.159 4.159 21 O -0.341 6.341 22 Si 0.610 3.390 23 C -0.154 4.154 24 C -0.166 4.166 25 C -0.146 4.146 26 H 0.086 0.914 27 H 0.086 0.914 28 H 0.099 0.901 29 H 0.089 0.911 30 H 0.088 0.912 31 H 0.096 0.904 32 H 0.097 0.903 33 H 0.096 0.904 34 H 0.090 0.910 35 H 0.230 0.770 36 H 0.187 0.813 37 H 0.093 0.907 38 H 0.118 0.882 39 H 0.101 0.899 40 H 0.140 0.860 41 H 0.224 0.776 42 H -0.181 1.181 43 H -0.178 1.178 44 H 0.175 0.825 45 H 0.087 0.913 46 H 0.096 0.904 47 H 0.091 0.909 48 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -0.144 2.845 3.046 4.170 hybrid contribution -0.231 0.531 1.700 1.796 sum -0.375 3.376 4.746 5.836 Atomic orbital electron populations 1.21818 0.92377 1.03224 1.03636 1.23070 0.95565 0.79951 1.02709 1.86506 1.24476 1.32648 1.83795 1.23764 0.80653 0.92650 0.72158 1.90687 1.60462 1.43172 1.45034 1.21178 0.96717 0.89754 1.02290 0.87162 1.21391 0.91520 0.96554 1.04418 1.21811 1.01498 0.95461 0.97518 1.21009 0.92986 0.82420 0.99603 0.88976 1.45882 1.66217 1.16975 1.08936 1.17384 0.76998 0.84173 0.83373 1.90792 1.50940 1.68653 1.31305 1.20328 1.13852 0.95936 0.93567 1.21922 1.01840 0.85919 0.98979 1.43478 1.47453 1.13085 1.06159 1.22252 1.00871 0.89931 0.94476 1.20807 1.09756 0.99241 0.83260 1.24766 1.09102 0.80671 1.01325 1.86575 1.33556 1.41561 1.72395 0.94224 0.78032 0.87975 0.78807 1.21633 1.03430 0.91935 0.98407 1.21926 0.94983 0.96369 1.03301 1.21500 1.01673 0.95423 0.96032 0.91410 0.91351 0.90053 0.91112 0.91170 0.90384 0.90276 0.90372 0.91019 0.77009 0.81289 0.90686 0.88247 0.89946 0.86039 0.77564 1.18105 1.17845 0.82481 0.91340 0.90448 0.90883 0.90014 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.20 10.29 37.16 0.38 0.58 16 2 C 0.06 0.04 6.19 37.16 0.23 0.27 16 3 O -0.36 -0.68 10.12 -39.27 -0.40 -1.08 16 4 C 0.47 1.05 7.25 36.00 0.26 1.31 16 5 O -0.51 -2.61 15.73 -18.75 -0.30 -2.90 16 6 C -0.08 0.05 2.63 -91.77 -0.24 -0.19 16 7 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 8 C -0.10 0.08 4.49 -26.73 -0.12 -0.04 16 9 C -0.12 0.29 5.39 -26.73 -0.14 0.15 16 10 C 0.14 -0.07 2.45 -67.93 -0.17 -0.24 16 11 H 0.09 0.17 7.58 -51.93 -0.39 -0.23 16 12 N -0.73 0.43 5.07 -54.93 -0.28 0.16 16 13 C 0.59 1.66 7.77 -12.59 -0.10 1.56 16 14 O -0.54 -3.63 16.63 5.25 0.09 -3.54 16 15 C -0.23 -0.35 6.29 -103.35 -0.65 -1.00 16 16 C 0.05 -0.05 10.83 -16.84 -0.18 -0.24 16 17 N -0.43 0.39 3.09 -119.89 -0.37 0.02 16 18 C 0.07 -0.22 9.81 59.85 0.59 0.37 16 19 C -0.02 0.00 6.14 -81.86 -0.50 -0.50 16 20 C -0.05 0.05 2.87 36.00 0.10 0.15 16 21 O -0.53 0.45 10.32 -35.23 -0.36 0.09 16 22 Si 0.71 -0.71 31.12 -169.99 -5.29 -6.00 16 23 C -0.13 -0.19 9.49 -37.50 -0.36 -0.55 16 24 C -0.13 0.08 5.49 -26.73 -0.15 -0.06 16 25 C -0.11 0.07 5.13 -26.73 -0.14 -0.06 16 26 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 27 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 28 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 29 H 0.07 0.06 8.13 -51.92 -0.42 -0.37 16 30 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 31 H 0.08 0.04 8.10 -51.92 -0.42 -0.38 16 32 H 0.08 -0.04 8.10 -51.93 -0.42 -0.46 16 33 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 34 H 0.07 -0.26 8.14 -51.93 -0.42 -0.69 16 35 H 0.40 -1.37 7.55 -40.82 -0.31 -1.68 16 36 H 0.17 -0.78 7.45 -52.49 -0.39 -1.17 16 37 H 0.07 -0.32 8.14 -51.93 -0.42 -0.74 16 38 H 0.10 -0.26 6.73 -51.93 -0.35 -0.61 16 39 H 0.08 -0.40 8.13 -51.93 -0.42 -0.82 16 40 H 0.12 -0.21 7.96 -51.93 -0.41 -0.62 16 41 H 0.38 -1.16 8.70 45.56 0.40 -0.77 16 42 H -0.26 -0.44 7.11 56.52 0.40 -0.04 16 43 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 44 H 0.16 0.09 6.89 -52.49 -0.36 -0.27 16 45 H 0.07 -0.12 8.14 -51.92 -0.42 -0.54 16 46 H 0.08 0.11 8.14 -51.93 -0.42 -0.32 16 47 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 48 H 0.08 -0.07 8.11 -51.93 -0.42 -0.49 16 LS Contribution 391.80 15.07 5.90 5.90 Total: 0.00 -9.83 391.80 -9.96 -19.79 By element: Atomic # 1 Polarization: -6.16 SS G_CDS: -7.78 Total: -13.94 kcal Atomic # 6 Polarization: 2.69 SS G_CDS: -1.18 Total: 1.51 kcal Atomic # 7 Polarization: 0.83 SS G_CDS: -0.65 Total: 0.18 kcal Atomic # 8 Polarization: -6.47 SS G_CDS: -0.97 Total: -7.44 kcal Atomic # 14 Polarization: -0.71 SS G_CDS: -5.29 Total: -6.00 kcal Total LS contribution 5.90 Total: 5.90 kcal Total: -9.83 -9.96 -19.79 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_13287730.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -97.054 kcal (2) G-P(sol) polarization free energy of solvation -9.832 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.886 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.959 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.791 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.844 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds