Wall clock time and date at job start Tue Mar 9 2021 13:04:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 O 1.45193 * 109.47428 * 2 1 4 4 C 1.34222 * 117.00495 * 179.97438 * 3 2 1 5 5 O 1.20826 * 119.99719 * 0.02562 * 4 3 2 6 6 C 1.50702 * 120.00388 * 179.97438 * 4 3 2 7 7 H 1.08993 * 109.46847 * 60.00256 * 6 4 3 8 8 C 1.52999 * 109.47228 * 179.97438 * 6 4 3 9 9 C 1.52999 * 109.47031 * 179.97438 * 8 6 4 10 10 C 1.52996 * 109.47703 * 300.00331 * 9 8 6 11 11 H 1.08999 * 109.47237 * 300.00281 * 10 9 8 12 12 N 1.46493 * 109.47222 * 179.97438 * 10 9 8 13 13 C 1.34784 * 119.99864 * 155.00033 * 12 10 9 14 14 O 1.21610 * 119.99776 * 359.72391 * 13 12 10 15 15 C 1.47372 * 120.00059 * 179.72884 * 13 12 10 16 16 C 1.36418 * 127.19210 * 359.68227 * 15 13 12 17 17 O 1.33655 * 108.39522 * 179.89841 * 16 15 13 18 18 C 1.34215 * 110.90792 * 0.38669 * 17 16 15 19 19 C 1.50700 * 125.43302 * 179.76565 * 18 17 16 20 20 O 1.42905 * 109.46947 * 244.99613 * 19 18 17 21 21 Si 1.86292 * 109.47422 * 4.99783 * 19 18 17 22 22 C 1.34178 * 109.12642 * 359.76372 * 18 17 16 23 23 C 1.53000 * 109.46775 * 59.99747 * 10 9 8 24 24 C 1.52997 * 109.46936 * 300.00032 * 6 4 3 25 25 H 1.09001 * 109.47024 * 299.99892 * 1 2 3 26 26 H 1.08995 * 109.47437 * 60.00210 * 1 2 3 27 27 H 1.09002 * 109.47381 * 179.97438 * 1 2 3 28 28 H 1.09001 * 109.47024 * 240.00107 * 2 1 3 29 29 H 1.09002 * 109.47021 * 120.00294 * 2 1 3 30 30 H 1.09010 * 109.46991 * 60.00477 * 8 6 4 31 31 H 1.08994 * 109.47214 * 300.00495 * 8 6 4 32 32 H 1.09003 * 109.46971 * 179.97438 * 9 8 6 33 33 H 1.08999 * 109.47003 * 60.00755 * 9 8 6 34 34 H 0.97000 * 120.00740 * 334.72725 * 12 10 9 35 35 H 1.07995 * 125.80423 * 0.02562 * 16 15 13 36 36 H 1.09002 * 109.47328 * 125.00336 * 19 18 17 37 37 H 0.96697 * 113.99747 * 60.00516 * 20 19 18 38 38 H 1.48503 * 109.99993 * 180.02562 * 21 19 18 39 39 H 1.48500 * 110.00197 * 301.31786 * 21 19 18 40 40 H 1.07997 * 127.02192 * 179.97438 * 22 18 17 41 41 H 1.09005 * 109.47224 * 60.00408 * 23 10 9 42 42 H 1.09008 * 109.47230 * 180.02562 * 23 10 9 43 43 H 1.08993 * 109.47536 * 299.99802 * 24 6 4 44 44 H 1.09000 * 109.46884 * 60.00411 * 24 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3689 0.0000 4 6 3.3447 1.5448 0.0005 5 8 4.0807 0.5866 0.0005 6 6 3.9207 2.9373 0.0000 7 1 3.5844 3.4699 0.8895 8 6 5.4486 2.8573 0.0014 9 6 6.0334 4.2711 0.0002 10 6 5.5630 5.0166 -1.2502 11 1 5.8996 4.4835 -2.1393 12 7 6.1225 6.3705 -1.2510 13 6 6.2870 7.0311 -2.4143 14 8 5.9757 6.5011 -3.4637 15 6 6.8443 8.3953 -2.4146 16 6 7.2346 9.1269 -1.3313 17 8 7.6840 10.3100 -1.7611 18 6 7.5995 10.3977 -3.0977 19 6 8.0113 11.5895 -3.9228 20 8 6.8600 12.1510 -4.5564 21 14 8.7978 12.8674 -2.8188 22 6 7.0897 9.2548 -3.5819 23 6 4.0351 5.0967 -1.2516 24 6 3.4498 3.6835 -1.2499 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 0.5138 -0.8899 27 1 -0.3634 -1.0277 -0.0005 28 1 1.8933 -0.5138 -0.8900 29 1 1.8933 -0.5139 0.8900 30 1 5.7854 2.3244 -0.8880 31 1 5.7837 2.3257 0.8920 32 1 7.1219 4.2140 0.0017 33 1 5.6968 4.8042 0.8893 34 1 6.3708 6.7932 -0.4140 35 1 7.1901 8.8042 -0.3017 36 1 8.7272 11.2756 -4.6826 37 1 6.1794 12.4527 -3.9393 38 1 9.2079 14.0482 -3.6206 39 1 7.8427 13.2804 -1.7594 40 1 6.8985 9.0155 -4.6174 41 1 3.6984 5.6299 -0.3624 42 1 3.6998 5.6275 -2.1427 43 1 3.7861 3.1509 -2.1394 44 1 2.3613 3.7406 -1.2504 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589458_13456056.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:13 Heat of formation + Delta-G solvation = -147.661384 kcal Electronic energy + Delta-G solvation = -27061.428468 eV Core-core repulsion = 22946.786383 eV Total energy + Delta-G solvation = -4114.642085 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -43.74502 -41.77123 -40.75726 -38.97782 -38.17215 -37.51839 -35.35550 -33.97645 -32.79823 -32.06534 -31.94404 -30.66940 -26.82662 -25.91036 -24.56843 -23.93257 -23.44514 -22.29293 -21.89850 -21.27335 -20.58204 -19.41533 -18.63405 -18.01127 -17.64063 -17.57820 -17.53972 -17.27939 -17.07277 -16.26181 -16.08646 -15.80823 -15.51905 -15.21887 -14.93311 -14.83438 -14.49863 -14.21639 -14.12876 -13.95190 -13.88325 -13.63092 -13.53944 -13.35759 -12.98023 -12.92202 -12.78863 -12.53629 -12.44596 -12.31492 -12.10397 -11.70538 -11.50041 -11.47135 -11.28111 -11.01731 -10.90889 -10.76894 -10.14329 -9.84331 -5.02887 0.20677 0.87216 1.09435 1.22944 1.44877 1.65079 1.68592 1.89409 2.02098 2.34059 3.10926 3.33173 3.41833 3.46673 3.54346 3.59646 3.82163 3.89219 3.96049 3.97197 4.00093 4.09532 4.17256 4.21990 4.27855 4.29619 4.30840 4.36709 4.53571 4.56418 4.62289 4.73051 4.75744 4.80411 4.87074 4.89721 4.99019 5.01327 5.04225 5.14250 5.19891 5.20169 5.41006 5.50714 5.79899 6.20234 6.41521 6.78221 7.19288 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.061 3.939 3 O -0.357 6.357 4 C 0.465 3.535 5 O -0.506 6.506 6 C -0.081 4.081 7 H 0.111 0.889 8 C -0.101 4.101 9 C -0.125 4.125 10 C 0.143 3.857 11 H 0.094 0.906 12 N -0.725 5.725 13 C 0.589 3.411 14 O -0.529 6.529 15 C -0.237 4.237 16 C 0.032 3.968 17 O -0.166 6.166 18 C -0.057 4.057 19 C -0.036 4.036 20 O -0.520 6.520 21 Si 0.705 3.295 22 C -0.122 4.122 23 C -0.128 4.128 24 C -0.108 4.108 25 H 0.067 0.933 26 H 0.067 0.933 27 H 0.081 0.919 28 H 0.071 0.929 29 H 0.070 0.930 30 H 0.078 0.922 31 H 0.080 0.920 32 H 0.079 0.921 33 H 0.073 0.927 34 H 0.398 0.602 35 H 0.214 0.786 36 H 0.138 0.862 37 H 0.380 0.620 38 H -0.249 1.249 39 H -0.256 1.256 40 H 0.162 0.838 41 H 0.070 0.930 42 H 0.076 0.924 43 H 0.073 0.927 44 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.504 1.823 5.500 5.816 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.013 4.013 3 O -0.274 6.274 4 C 0.308 3.692 5 O -0.393 6.393 6 C -0.100 4.100 7 H 0.129 0.871 8 C -0.139 4.139 9 C -0.163 4.163 10 C 0.039 3.961 11 H 0.112 0.888 12 N -0.376 5.376 13 C 0.376 3.624 14 O -0.406 6.406 15 C -0.242 4.242 16 C -0.039 4.039 17 O -0.062 6.062 18 C -0.105 4.105 19 C -0.145 4.145 20 O -0.327 6.327 21 Si 0.604 3.396 22 C -0.142 4.142 23 C -0.166 4.166 24 C -0.146 4.146 25 H 0.086 0.914 26 H 0.086 0.914 27 H 0.100 0.900 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.096 0.904 31 H 0.099 0.901 32 H 0.098 0.902 33 H 0.092 0.908 34 H 0.232 0.768 35 H 0.230 0.770 36 H 0.156 0.844 37 H 0.229 0.771 38 H -0.173 1.173 39 H -0.180 1.180 40 H 0.180 0.820 41 H 0.088 0.912 42 H 0.095 0.905 43 H 0.091 0.909 44 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 0.880 2.031 4.655 5.155 hybrid contribution -1.237 -0.251 0.314 1.301 sum -0.357 1.780 4.969 5.291 Atomic orbital electron populations 1.21819 0.92348 1.03254 1.03642 1.23075 0.95586 0.79896 1.02730 1.86501 1.24441 1.32708 1.83772 1.23734 0.80684 0.92613 0.72202 1.90689 1.60462 1.43156 1.45003 1.21173 0.96701 0.89841 1.02246 0.87094 1.21393 0.91541 0.96443 1.04529 1.21815 1.01608 0.95552 0.97323 1.21072 0.93137 0.81972 0.99909 0.88837 1.45887 1.65948 1.17186 1.08608 1.17266 0.77386 0.83959 0.83768 1.90825 1.50243 1.68251 1.31262 1.21538 1.11594 0.96934 0.94139 1.24470 0.96974 0.83175 0.99259 1.83694 1.65135 1.34516 1.22866 1.22673 1.07510 0.99651 0.80661 1.24402 0.92535 0.96394 1.01160 1.86683 1.29640 1.80210 1.36135 0.94448 0.87914 0.78701 0.78585 1.22551 1.00690 0.91309 0.99665 1.21924 0.94752 0.96609 1.03362 1.21486 1.01774 0.95283 0.96095 0.91389 0.91359 0.90025 0.91108 0.91134 0.90364 0.90121 0.90244 0.90848 0.76816 0.76985 0.84448 0.77121 1.17345 1.18024 0.82043 0.91162 0.90510 0.90877 0.89895 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.23 10.29 37.16 0.38 0.61 16 2 C 0.06 0.03 6.19 37.16 0.23 0.26 16 3 O -0.36 -0.58 10.12 -39.24 -0.40 -0.98 16 4 C 0.47 0.89 7.26 36.01 0.26 1.15 16 5 O -0.51 -2.44 15.73 -18.75 -0.29 -2.74 16 6 C -0.08 0.09 2.63 -91.77 -0.24 -0.15 16 7 H 0.11 -0.31 8.14 -51.93 -0.42 -0.73 16 8 C -0.10 0.14 4.49 -26.73 -0.12 0.02 16 9 C -0.13 0.39 5.39 -26.73 -0.14 0.24 16 10 C 0.14 -0.18 2.46 -67.94 -0.17 -0.35 16 11 H 0.09 0.10 7.57 -51.93 -0.39 -0.29 16 12 N -0.73 1.18 5.07 -54.90 -0.28 0.91 16 13 C 0.59 1.16 7.78 -12.54 -0.10 1.07 16 14 O -0.53 -3.34 16.64 5.27 0.09 -3.25 16 15 C -0.24 -0.16 6.31 -103.28 -0.65 -0.82 16 16 C 0.03 -0.07 11.61 30.08 0.35 0.28 16 17 O -0.17 0.14 8.90 7.65 0.07 0.20 16 18 C -0.06 0.00 6.18 -35.74 -0.22 -0.22 16 19 C -0.04 0.04 2.97 36.01 0.11 0.14 16 20 O -0.52 -0.22 12.88 -35.23 -0.45 -0.68 16 21 Si 0.70 -1.20 32.09 -169.99 -5.46 -6.65 16 22 C -0.12 -0.20 10.90 -37.45 -0.41 -0.60 16 23 C -0.13 0.17 5.49 -26.75 -0.15 0.02 16 24 C -0.11 0.12 5.13 -26.75 -0.14 -0.01 16 25 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 26 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 27 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 28 H 0.07 0.04 8.13 -51.93 -0.42 -0.38 16 29 H 0.07 0.03 8.13 -51.93 -0.42 -0.39 16 30 H 0.08 0.00 8.10 -51.92 -0.42 -0.42 16 31 H 0.08 -0.08 8.10 -51.93 -0.42 -0.50 16 32 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 33 H 0.07 -0.33 8.14 -51.93 -0.42 -0.76 16 34 H 0.40 -1.96 7.58 -40.82 -0.31 -2.27 16 35 H 0.21 -1.48 7.47 -52.49 -0.39 -1.87 16 36 H 0.14 -0.31 7.96 -51.93 -0.41 -0.72 16 37 H 0.38 -0.93 8.70 45.56 0.40 -0.54 16 38 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 39 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 40 H 0.16 0.35 8.06 -52.49 -0.42 -0.07 16 41 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 42 H 0.08 0.06 8.14 -51.92 -0.42 -0.36 16 43 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 44 H 0.08 -0.10 8.11 -51.93 -0.42 -0.52 16 LS Contribution 371.93 15.07 5.60 5.60 Total: 0.00 -10.08 371.93 -8.77 -18.85 By element: Atomic # 1 Polarization: -6.26 SS G_CDS: -6.64 Total: -12.90 kcal Atomic # 6 Polarization: 2.64 SS G_CDS: -1.01 Total: 1.63 kcal Atomic # 7 Polarization: 1.18 SS G_CDS: -0.28 Total: 0.91 kcal Atomic # 8 Polarization: -6.45 SS G_CDS: -0.99 Total: -7.44 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.46 Total: -6.65 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -10.08 -8.77 -18.85 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589458_13456056.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -128.810 kcal (2) G-P(sol) polarization free energy of solvation -10.083 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -138.893 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.769 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.852 kcal (6) G-S(sol) free energy of system = (1) + (5) -147.661 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds