Wall clock time and date at job start Tue Mar 9 2021 13:08:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86298 * 109.47196 * 2 1 4 4 C 1.50699 * 109.47173 * 120.00160 * 2 1 3 5 5 C 1.38502 * 119.80196 * 244.99812 * 4 2 1 6 6 C 1.37833 * 120.29966 * 180.02562 * 5 4 2 7 7 C 1.39675 * 119.90736 * 359.97438 * 6 5 4 8 8 C 1.47531 * 120.19352 * 179.97438 * 7 6 5 9 9 O 1.21582 * 119.99841 * 180.02562 * 8 7 6 10 10 N 1.34778 * 120.00000 * 359.97438 * 8 7 6 11 11 C 1.46494 * 120.00026 * 180.02562 * 10 8 7 12 12 H 1.08996 * 112.90952 * 23.75045 * 11 10 8 13 13 C 1.53785 * 113.61459 * 155.00350 * 11 10 8 14 14 C 1.53779 * 87.08132 * 139.98147 * 13 11 10 15 15 H 1.09003 * 113.61704 * 89.19916 * 14 13 11 16 16 C 1.53004 * 113.61212 * 220.01666 * 14 13 11 17 17 N 1.46505 * 109.47120 * 184.99763 * 16 14 13 18 18 C 1.34428 * 126.82137 * 125.02328 * 17 16 14 19 19 N 1.30829 * 108.07758 * 179.97438 * 18 17 16 20 20 C 1.33239 * 109.82920 * 0.02562 * 19 18 17 21 21 N 1.30714 * 108.94945 * 359.97438 * 20 19 18 22 22 C 1.53782 * 87.08322 * 334.56532 * 14 13 11 23 23 C 1.40174 * 119.61170 * 0.25599 * 7 6 5 24 24 O 1.35660 * 120.14412 * 179.74693 * 23 7 6 25 25 C 1.38096 * 119.80686 * 65.02236 * 4 2 1 26 26 H 0.96709 * 114.00237 * 299.99913 * 1 2 3 27 27 H 1.09004 * 109.47046 * 240.00251 * 2 1 3 28 28 H 1.48502 * 110.00056 * 300.00426 * 3 2 1 29 29 H 1.48501 * 110.00288 * 61.32044 * 3 2 1 30 30 H 1.07997 * 119.85566 * 0.02562 * 5 4 2 31 31 H 1.07999 * 120.05089 * 180.02562 * 6 5 4 32 32 H 0.97004 * 120.00037 * 0.02562 * 10 8 7 33 33 H 1.09001 * 113.61577 * 25.42864 * 13 11 10 34 34 H 1.09006 * 113.60844 * 254.52705 * 13 11 10 35 35 H 1.09005 * 109.46732 * 65.00193 * 16 14 13 36 36 H 1.08994 * 109.47332 * 305.00146 * 16 14 13 37 37 H 1.08003 * 125.95916 * 0.03061 * 18 17 16 38 38 H 1.07995 * 125.52955 * 180.02562 * 20 19 18 39 39 H 1.08990 * 113.61540 * 139.98295 * 22 14 13 40 40 H 1.09000 * 113.61554 * 270.88676 * 22 14 13 41 41 H 0.96702 * 113.99990 * 90.00919 * 24 23 7 42 42 H 1.08003 * 119.95423 * 359.95230 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6397 -0.0070 2.1905 6 6 3.1043 -0.6466 3.3195 7 6 2.8599 -2.0102 3.4978 8 6 3.3549 -2.7013 4.7036 9 8 3.1405 -3.8885 4.8549 10 7 4.0455 -2.0169 5.6369 11 6 4.5374 -2.7032 6.8340 12 1 4.6596 -3.7764 6.6877 13 6 5.7607 -2.0255 7.4737 14 6 5.1222 -2.3380 8.8374 15 1 5.4054 -3.3108 9.2395 16 6 5.2712 -1.2073 9.8573 17 7 4.7406 -1.6438 11.1512 18 6 5.3873 -1.6407 12.3297 19 7 4.5717 -2.1043 13.2416 20 6 3.4007 -2.4129 12.6859 21 7 3.4550 -2.1483 11.4069 22 6 3.7655 -2.3398 8.1134 23 6 2.1468 -2.7195 2.5214 24 8 1.9078 -4.0453 2.6811 25 6 1.6831 -2.0590 1.3938 26 1 -0.3934 0.4417 0.7651 27 1 1.7923 -0.5138 -0.8900 28 1 1.5614 2.4679 -1.2084 29 1 1.5879 2.4586 1.2242 30 1 2.8288 1.0475 2.0539 31 1 3.6559 -0.0941 4.0658 32 1 4.2168 -1.0698 5.5160 33 1 5.8314 -0.9592 7.2587 34 1 6.6960 -2.5568 7.2975 35 1 4.7180 -0.3331 9.5140 36 1 6.3252 -0.9512 9.9646 37 1 6.4027 -1.3120 12.4950 38 1 2.5451 -2.8155 13.2075 39 1 3.0901 -3.1246 8.4537 40 1 3.2907 -1.3594 8.0733 41 1 1.0822 -4.2432 3.1441 42 1 1.1296 -2.6006 0.6409 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14644236_13422076.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:43 Heat of formation + Delta-G solvation = 47.668913 kcal Electronic energy + Delta-G solvation = -27148.707242 eV Core-core repulsion = 23098.943544 eV Total energy + Delta-G solvation = -4049.763698 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.136 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -42.99300 -41.75778 -40.72561 -39.32167 -38.40570 -37.25978 -35.49244 -34.20098 -32.63231 -32.12741 -31.16102 -29.24162 -27.56801 -26.91627 -24.84001 -24.01046 -23.34440 -22.89602 -22.35181 -21.56887 -20.96390 -19.44724 -18.70910 -18.43126 -18.32286 -17.54502 -16.90899 -16.79348 -16.60528 -16.29061 -16.17062 -15.90882 -15.82022 -15.72676 -15.32922 -15.07481 -14.95846 -14.62708 -14.47337 -13.83636 -13.79288 -13.64843 -13.40174 -13.13114 -13.05444 -12.94975 -12.45966 -12.35217 -12.13180 -12.05472 -11.65604 -11.55408 -10.93652 -10.89406 -10.73742 -10.68805 -10.61079 -10.22461 -10.06077 -9.84193 -5.09095 -0.45783 0.05378 0.67917 1.11713 1.29950 1.45243 1.71467 1.84329 2.02520 2.06064 2.52710 3.03489 3.07932 3.23869 3.25964 3.36404 3.39496 3.43957 3.56973 3.59041 3.67745 3.81785 3.91082 3.95581 3.98051 4.08193 4.15544 4.30734 4.37910 4.45583 4.51287 4.55174 4.59940 4.64192 4.79221 4.90777 4.98108 5.02826 5.10502 5.14715 5.30018 5.43636 5.48335 5.49077 5.81209 6.24373 6.39746 6.67213 7.14739 7.17840 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.081 4.081 3 Si 0.691 3.309 4 C -0.074 4.074 5 C -0.137 4.137 6 C -0.065 4.065 7 C -0.164 4.164 8 C 0.560 3.440 9 O -0.516 6.516 10 N -0.719 5.719 11 C 0.124 3.876 12 H 0.118 0.882 13 C -0.137 4.137 14 C -0.119 4.119 15 H 0.101 0.899 16 C 0.140 3.860 17 N -0.380 5.380 18 C 0.252 3.748 19 N -0.547 5.547 20 C 0.197 3.803 21 N -0.312 5.312 22 C -0.135 4.135 23 C 0.173 3.827 24 O -0.476 6.476 25 C -0.129 4.129 26 H 0.377 0.623 27 H 0.123 0.877 28 H -0.255 1.255 29 H -0.258 1.258 30 H 0.136 0.864 31 H 0.133 0.867 32 H 0.399 0.601 33 H 0.091 0.909 34 H 0.083 0.917 35 H 0.091 0.909 36 H 0.105 0.895 37 H 0.218 0.782 38 H 0.216 0.784 39 H 0.077 0.923 40 H 0.086 0.914 41 H 0.398 0.602 42 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.399 6.024 -0.641 7.487 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.191 4.191 3 Si 0.592 3.408 4 C -0.075 4.075 5 C -0.155 4.155 6 C -0.084 4.084 7 C -0.168 4.168 8 C 0.347 3.653 9 O -0.392 6.392 10 N -0.371 5.371 11 C 0.019 3.981 12 H 0.136 0.864 13 C -0.176 4.176 14 C -0.139 4.139 15 H 0.119 0.881 16 C 0.018 3.982 17 N -0.171 5.171 18 C -0.045 4.045 19 N -0.274 5.274 20 C -0.106 4.106 21 N -0.140 5.140 22 C -0.174 4.174 23 C 0.126 3.874 24 O -0.288 6.288 25 C -0.147 4.147 26 H 0.225 0.775 27 H 0.141 0.859 28 H -0.180 1.180 29 H -0.183 1.183 30 H 0.154 0.846 31 H 0.151 0.849 32 H 0.235 0.765 33 H 0.110 0.890 34 H 0.102 0.898 35 H 0.109 0.891 36 H 0.123 0.877 37 H 0.234 0.766 38 H 0.233 0.767 39 H 0.096 0.904 40 H 0.105 0.895 41 H 0.257 0.743 42 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 4.151 5.469 -1.602 7.051 hybrid contribution -1.150 0.407 0.735 1.424 sum 3.000 5.876 -0.868 6.654 Atomic orbital electron populations 1.86639 1.17301 1.79972 1.49328 1.25164 0.84271 1.11410 0.98255 0.94880 0.91509 0.73981 0.80426 1.20378 0.96773 0.94110 0.96203 1.20994 0.99913 1.00233 0.94365 1.21130 0.97411 0.92553 0.97285 1.20438 1.05617 0.94393 0.96356 1.18082 0.78225 0.86673 0.82324 1.90839 1.56150 1.14605 1.77596 1.45873 1.56858 1.12967 1.21366 1.22507 0.94072 0.98764 0.82764 0.86407 1.23387 0.98327 1.01883 0.93986 1.22627 0.98610 0.99196 0.93459 0.88099 1.21869 0.99690 0.97356 0.79246 1.50590 1.09825 1.47612 1.09039 1.26132 1.00057 0.96941 0.81359 1.70564 1.02785 1.21067 1.32954 1.26076 0.96929 0.98666 0.88955 1.78092 0.97834 1.20157 1.17899 1.23462 0.96308 1.03122 0.94475 1.18516 0.93719 0.83492 0.91640 1.84761 1.46186 1.17870 1.79936 1.21361 1.00905 0.93892 0.98550 0.77531 0.85918 1.17993 1.18313 0.84649 0.84908 0.76537 0.89005 0.89841 0.89109 0.87672 0.76551 0.76730 0.90383 0.89542 0.74317 0.84174 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.00 12.83 -35.23 -0.45 -0.45 16 2 C -0.08 0.13 2.79 36.00 0.10 0.23 16 3 Si 0.69 -1.73 29.86 -169.99 -5.08 -6.81 16 4 C -0.07 0.09 5.35 -104.58 -0.56 -0.47 16 5 C -0.14 0.32 8.64 -39.63 -0.34 -0.02 16 6 C -0.07 0.14 9.54 -39.19 -0.37 -0.23 16 7 C -0.16 -0.11 5.89 -104.85 -0.62 -0.72 16 8 C 0.56 1.11 7.76 -12.47 -0.10 1.01 16 9 O -0.52 -3.04 14.76 -16.58 -0.24 -3.28 16 10 N -0.72 1.05 5.30 -54.06 -0.29 0.76 16 11 C 0.12 -0.18 4.24 -67.12 -0.28 -0.46 16 12 H 0.12 0.10 7.46 -51.93 -0.39 -0.29 16 13 C -0.14 0.59 7.39 -25.92 -0.19 0.40 16 14 C -0.12 0.37 3.85 -89.81 -0.35 0.02 16 15 H 0.10 -0.16 8.14 -51.93 -0.42 -0.59 16 16 C 0.14 -0.53 6.39 -4.04 -0.03 -0.56 16 17 N -0.38 0.11 3.69 -62.63 -0.23 -0.12 16 18 C 0.25 -0.10 12.63 -90.66 -1.14 -1.24 16 19 N -0.55 -1.47 11.19 -15.83 -0.18 -1.65 16 20 C 0.20 0.42 13.03 -91.81 -1.20 -0.78 16 21 N -0.31 -0.75 12.57 29.29 0.37 -0.38 16 22 C -0.13 0.19 7.43 -25.91 -0.19 -0.01 16 23 C 0.17 0.27 6.72 -38.70 -0.26 0.01 16 24 O -0.48 -1.28 11.58 -40.56 -0.47 -1.75 16 25 C -0.13 -0.04 9.60 -39.48 -0.38 -0.42 16 26 H 0.38 -1.11 8.70 45.56 0.40 -0.72 16 27 H 0.12 -0.25 7.96 -51.93 -0.41 -0.67 16 28 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 29 H -0.26 0.26 7.00 56.52 0.40 0.65 16 30 H 0.14 -0.58 4.81 -52.49 -0.25 -0.84 16 31 H 0.13 -0.71 6.40 -52.49 -0.34 -1.05 16 32 H 0.40 -1.76 6.76 -40.82 -0.28 -2.04 16 33 H 0.09 -0.56 8.08 -51.93 -0.42 -0.98 16 34 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 35 H 0.09 -0.39 7.84 -51.93 -0.41 -0.79 16 36 H 0.11 -0.70 8.09 -51.93 -0.42 -1.12 16 37 H 0.22 -1.05 8.06 -52.48 -0.42 -1.48 16 38 H 0.22 -0.17 8.06 -52.49 -0.42 -0.59 16 39 H 0.08 0.09 8.14 -51.93 -0.42 -0.34 16 40 H 0.09 -0.14 7.90 -51.93 -0.41 -0.55 16 41 H 0.40 -0.34 9.06 45.56 0.41 0.08 16 42 H 0.14 0.01 8.06 -52.48 -0.42 -0.41 16 LS Contribution 358.81 15.07 5.41 5.41 Total: 0.00 -12.58 358.81 -11.33 -23.91 By element: Atomic # 1 Polarization: -8.14 SS G_CDS: -4.25 Total: -12.39 kcal Atomic # 6 Polarization: 2.66 SS G_CDS: -5.91 Total: -3.25 kcal Atomic # 7 Polarization: -1.06 SS G_CDS: -0.33 Total: -1.39 kcal Atomic # 8 Polarization: -4.32 SS G_CDS: -1.17 Total: -5.48 kcal Atomic # 14 Polarization: -1.73 SS G_CDS: -5.08 Total: -6.81 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -12.58 -11.33 -23.91 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14644236_13422076.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.577 kcal (2) G-P(sol) polarization free energy of solvation -12.583 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.994 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.325 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.908 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.669 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds