Wall clock time and date at job start Tue Mar 9 2021 13:22:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86289 * 109.47336 * 2 1 4 4 C 1.50698 * 109.46865 * 239.99600 * 2 1 3 5 5 C 1.34497 * 125.49165 * 150.31594 * 4 2 1 6 6 C 1.46757 * 106.36509 * 180.13058 * 5 4 2 7 7 C 1.47263 * 126.96980 * 179.86213 * 6 5 4 8 8 O 1.21621 * 120.00279 * 179.68382 * 7 6 5 9 9 N 1.34782 * 119.99932 * 359.67351 * 7 6 5 10 10 C 1.46496 * 120.00189 * 180.02562 * 9 7 6 11 11 H 1.09004 * 112.84458 * 336.20108 * 10 9 7 12 12 C 1.53953 * 113.74368 * 107.40404 * 10 9 7 13 13 C 1.53778 * 87.01978 * 139.94665 * 12 10 9 14 14 H 1.08997 * 113.61648 * 89.22791 * 13 12 10 15 15 C 1.52995 * 113.61725 * 220.05074 * 13 12 10 16 16 N 1.46500 * 109.47185 * 274.13825 * 15 13 12 17 17 C 1.34947 * 126.04040 * 125.00042 * 16 15 13 18 18 C 1.35311 * 107.75028 * 180.02562 * 17 16 15 19 19 C 1.39876 * 107.91749 * 359.97438 * 18 17 16 20 20 N 1.30834 * 108.20073 * 0.27043 * 19 18 17 21 21 C 1.53778 * 113.61802 * 205.00607 * 10 9 7 22 22 C 1.36330 * 106.06247 * 359.59257 * 6 5 4 23 23 C 1.50997 * 126.79610 * 180.25911 * 22 6 5 24 24 C 1.53385 * 108.25629 * 164.32403 * 23 22 6 25 25 C 1.53164 * 109.04377 * 48.46186 * 24 23 22 26 26 C 1.53133 * 109.52559 * 290.42784 * 25 24 23 27 27 N 1.35217 * 108.65931 * 0.25592 * 22 6 5 28 28 H 0.96705 * 113.99353 * 60.00185 * 1 2 3 29 29 H 1.09004 * 109.46883 * 119.99941 * 2 1 3 30 30 H 1.48505 * 110.00249 * 298.67800 * 3 2 1 31 31 H 1.48498 * 110.00345 * 59.99879 * 3 2 1 32 32 H 1.07998 * 126.81834 * 0.02562 * 5 4 2 33 33 H 0.97003 * 119.99717 * 0.02562 * 9 7 6 34 34 H 1.09002 * 113.61229 * 25.42696 * 12 10 9 35 35 H 1.08998 * 113.66856 * 254.47284 * 12 10 9 36 36 H 1.09001 * 109.47451 * 154.13679 * 15 13 12 37 37 H 1.09007 * 109.47149 * 34.13429 * 15 13 12 38 38 H 1.08009 * 126.12562 * 359.96327 * 17 16 15 39 39 H 1.07992 * 126.04231 * 179.97438 * 18 17 16 40 40 H 1.08002 * 125.89548 * 179.97438 * 19 18 17 41 41 H 1.09005 * 113.61870 * 105.38448 * 21 10 9 42 42 H 1.09007 * 113.61095 * 334.48272 * 21 10 9 43 43 H 1.09004 * 109.70325 * 284.02575 * 23 22 6 44 44 H 1.09000 * 109.70208 * 44.63873 * 23 22 6 45 45 H 1.09007 * 109.54390 * 288.59264 * 24 23 22 46 46 H 1.08996 * 109.54662 * 168.33356 * 24 23 22 47 47 H 1.09001 * 109.45889 * 170.40767 * 25 24 23 48 48 H 1.08998 * 109.46046 * 50.44605 * 25 24 23 49 49 H 1.09003 * 109.55844 * 291.16991 * 26 25 24 50 50 H 1.08999 * 109.65755 * 170.89365 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7563 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 3.0886 -0.4505 -1.8646 6 6 3.1553 -1.3779 -3.0000 7 6 4.2336 -1.4802 -3.9977 8 8 4.1611 -2.3043 -4.8892 9 7 5.3009 -0.6604 -3.9230 10 6 6.3733 -0.7618 -4.9158 11 1 6.4224 -1.7435 -5.3870 12 6 6.4003 0.4044 -5.9205 13 6 7.9330 0.3662 -5.8011 14 1 8.4098 -0.3065 -6.5139 15 6 8.5799 1.7523 -5.7681 16 7 8.8029 2.2199 -7.1385 17 6 8.3608 3.3822 -7.6626 18 6 8.7750 3.4383 -8.9496 19 6 9.4954 2.2705 -9.2211 20 7 9.5080 1.5369 -8.1378 21 6 7.7330 -0.2536 -4.4080 22 6 2.0195 -2.1296 -2.9403 23 6 1.6159 -3.2351 -3.8864 24 6 0.4943 -4.0468 -3.2262 25 6 -0.5704 -3.0847 -2.6909 26 6 -0.0059 -2.3095 -1.4970 27 7 1.2885 -1.7252 -1.8771 28 1 -0.3932 0.4417 -0.7651 29 1 1.7924 -0.5138 0.8900 30 1 1.5881 2.4585 -1.2243 31 1 1.5616 2.4678 1.2084 32 1 3.8221 0.2942 -1.5932 33 1 5.3588 -0.0033 -3.2118 34 1 5.9551 1.3221 -5.5362 35 1 6.0327 0.1370 -6.9112 36 1 9.5338 1.6957 -5.2438 37 1 7.9209 2.4486 -5.2494 38 1 7.7796 4.1327 -7.1475 39 1 8.5832 4.2425 -9.6443 40 1 9.9569 2.0159 -10.1638 41 1 8.4398 -1.0513 -4.1795 42 1 7.6528 0.4840 -3.6094 43 1 1.2574 -2.8056 -4.8219 44 1 2.4713 -3.8817 -4.0822 45 1 0.9039 -4.6321 -2.4028 46 1 0.0457 -4.7144 -3.9618 47 1 -1.4461 -3.6516 -2.3747 48 1 -0.8553 -2.3848 -3.4765 49 1 0.1328 -2.9871 -0.6545 50 1 -0.6969 -1.5146 -1.2161 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_16915396.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:22:28 Heat of formation + Delta-G solvation = 80.825878 kcal Electronic energy + Delta-G solvation = -31596.429164 eV Core-core repulsion = 27400.172595 eV Total energy + Delta-G solvation = -4196.256569 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.184 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.79029 -41.99343 -40.79524 -39.10900 -38.17121 -36.95693 -34.93902 -33.57481 -33.25547 -31.21409 -30.91253 -29.64503 -28.36628 -26.77739 -26.62971 -24.79198 -24.72631 -23.10364 -21.98786 -21.81443 -21.49655 -21.11618 -20.42960 -19.56661 -18.88462 -18.22047 -17.48317 -17.15704 -16.75102 -16.61162 -16.27949 -16.25458 -15.99109 -15.54772 -15.42962 -15.36248 -15.13473 -15.04658 -14.63272 -14.55808 -14.50529 -14.30885 -14.03462 -13.88636 -13.64130 -13.55554 -13.31578 -13.25630 -12.91034 -12.79311 -12.43293 -12.21555 -12.18931 -12.08431 -11.88951 -11.85485 -11.80230 -11.47988 -11.41991 -10.95269 -10.63382 -10.22391 -9.90981 -9.55068 -9.40188 -9.01491 -5.08332 0.84223 0.96294 1.07744 1.38458 1.55248 1.64512 1.70436 1.95328 2.05987 2.47544 2.69089 3.01691 3.38356 3.40147 3.46576 3.48795 3.51998 3.61895 3.72863 3.75873 3.79549 3.93657 4.00228 4.09808 4.17822 4.22478 4.29349 4.35224 4.35689 4.39125 4.42919 4.52878 4.58147 4.64410 4.67308 4.70356 4.73127 4.78430 4.83536 4.89734 4.94119 4.99709 5.01566 5.03200 5.13814 5.16794 5.20688 5.32489 5.66816 5.74628 5.83659 5.99690 6.16932 6.18553 6.20428 6.74649 6.88748 7.51996 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.051 4.051 3 Si 0.712 3.288 4 C -0.013 4.013 5 C -0.162 4.162 6 C -0.235 4.235 7 C 0.595 3.405 8 O -0.548 6.548 9 N -0.718 5.718 10 C 0.129 3.871 11 H 0.116 0.884 12 C -0.146 4.146 13 C -0.121 4.121 14 H 0.109 0.891 15 C 0.145 3.855 16 N -0.370 5.370 17 C 0.052 3.948 18 C -0.276 4.276 19 C 0.043 3.957 20 N -0.295 5.295 21 C -0.137 4.137 22 C 0.121 3.879 23 C -0.056 4.056 24 C -0.129 4.129 25 C -0.139 4.139 26 C 0.099 3.901 27 N -0.427 5.427 28 H 0.376 0.624 29 H 0.121 0.879 30 H -0.257 1.257 31 H -0.255 1.255 32 H 0.152 0.848 33 H 0.400 0.600 34 H 0.085 0.915 35 H 0.072 0.928 36 H 0.087 0.913 37 H 0.096 0.904 38 H 0.172 0.828 39 H 0.146 0.854 40 H 0.182 0.818 41 H 0.081 0.919 42 H 0.090 0.910 43 H 0.088 0.912 44 H 0.100 0.900 45 H 0.069 0.931 46 H 0.080 0.920 47 H 0.088 0.912 48 H 0.074 0.926 49 H 0.083 0.917 50 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.006 2.969 3.735 4.876 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.339 6.339 2 C -0.160 4.160 3 Si 0.610 3.390 4 C -0.121 4.121 5 C -0.186 4.186 6 C -0.245 4.245 7 C 0.385 3.615 8 O -0.427 6.427 9 N -0.368 5.368 10 C 0.024 3.976 11 H 0.134 0.866 12 C -0.185 4.185 13 C -0.140 4.140 14 H 0.127 0.873 15 C 0.024 3.976 16 N -0.152 5.152 17 C -0.094 4.094 18 C -0.305 4.305 19 C -0.143 4.143 20 N -0.116 5.116 21 C -0.176 4.176 22 C 0.003 3.997 23 C -0.093 4.093 24 C -0.167 4.167 25 C -0.176 4.176 26 C -0.022 4.022 27 N -0.104 5.104 28 H 0.225 0.775 29 H 0.139 0.861 30 H -0.181 1.181 31 H -0.179 1.179 32 H 0.170 0.830 33 H 0.235 0.765 34 H 0.103 0.897 35 H 0.091 0.909 36 H 0.105 0.895 37 H 0.115 0.885 38 H 0.189 0.811 39 H 0.164 0.836 40 H 0.199 0.801 41 H 0.100 0.900 42 H 0.109 0.891 43 H 0.106 0.894 44 H 0.119 0.881 45 H 0.087 0.913 46 H 0.098 0.902 47 H 0.107 0.893 48 H 0.093 0.907 49 H 0.101 0.899 50 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -1.162 1.647 4.484 4.916 hybrid contribution -1.344 1.009 -0.485 1.750 sum -2.506 2.656 3.999 5.416 Atomic orbital electron populations 1.86593 1.18064 1.79531 1.49732 1.24836 0.83450 1.11174 0.96565 0.94582 0.91284 0.72517 0.80590 1.20639 0.96243 0.95728 0.99526 1.21622 0.97710 1.02710 0.96568 1.19835 0.98009 1.05063 1.01553 1.17350 0.80886 0.79893 0.83414 1.90768 1.79036 1.36935 1.35980 1.45703 1.20827 1.38763 1.31515 1.22407 0.85584 0.99958 0.89658 0.86568 1.23585 0.94908 0.99375 1.00646 1.22700 0.96298 0.96202 0.98829 0.87325 1.21748 1.01814 0.96036 0.77989 1.48718 1.41349 1.14582 1.10574 1.22574 1.00649 0.90784 0.95428 1.21548 1.09805 1.02345 0.96824 1.23924 0.99368 0.93287 0.97699 1.77337 1.16713 1.20499 0.97075 1.23368 0.96950 1.00903 0.96358 1.20407 0.91277 0.97632 0.90391 1.20517 0.99452 0.93582 0.95798 1.21727 0.95839 0.97914 1.01208 1.21940 0.99278 0.99008 0.97423 1.22285 0.82646 0.98925 0.98310 1.43864 1.17483 1.27118 1.21906 0.77535 0.86145 1.18080 1.17921 0.83013 0.76508 0.89673 0.90924 0.89483 0.88544 0.81122 0.83607 0.80093 0.89989 0.89112 0.89407 0.88123 0.91265 0.90173 0.89314 0.90742 0.89903 0.87908 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.42 10.28 -35.23 -0.36 0.06 16 2 C -0.05 0.08 3.00 36.00 0.11 0.18 16 3 Si 0.71 -1.71 31.12 -169.99 -5.29 -7.00 16 4 C -0.01 0.00 6.14 -81.87 -0.50 -0.50 16 5 C -0.16 0.05 9.09 -37.46 -0.34 -0.29 16 6 C -0.24 -0.52 6.28 -103.48 -0.65 -1.17 16 7 C 0.59 1.90 7.81 -12.59 -0.10 1.81 16 8 O -0.55 -3.59 14.93 5.26 0.08 -3.52 16 9 N -0.72 0.10 5.36 -54.06 -0.29 -0.19 16 10 C 0.13 -0.03 4.24 -67.03 -0.28 -0.31 16 11 H 0.12 0.23 7.46 -51.93 -0.39 -0.15 16 12 C -0.15 0.08 7.45 -25.83 -0.19 -0.11 16 13 C -0.12 0.15 3.85 -89.81 -0.35 -0.20 16 14 H 0.11 0.10 7.98 -51.93 -0.41 -0.31 16 15 C 0.15 -0.24 6.33 -4.04 -0.03 -0.27 16 16 N -0.37 -0.53 3.68 -61.36 -0.23 -0.76 16 17 C 0.05 0.02 11.45 -17.23 -0.20 -0.17 16 18 C -0.28 -0.36 10.80 -40.01 -0.43 -0.79 16 19 C 0.04 0.10 12.03 -17.36 -0.21 -0.11 16 20 N -0.29 -1.13 12.28 30.63 0.38 -0.75 16 21 C -0.14 0.36 7.40 -25.92 -0.19 0.17 16 22 C 0.12 0.26 6.57 -81.64 -0.54 -0.28 16 23 C -0.06 -0.07 5.32 -27.54 -0.15 -0.22 16 24 C -0.13 0.11 5.98 -26.45 -0.16 -0.05 16 25 C -0.14 0.25 5.92 -26.58 -0.16 0.10 16 26 C 0.10 -0.11 6.22 -3.69 -0.02 -0.13 16 27 N -0.43 -0.30 3.11 -107.37 -0.33 -0.63 16 28 H 0.38 -1.15 8.27 45.56 0.38 -0.77 16 29 H 0.12 -0.25 7.96 -51.93 -0.41 -0.66 16 30 H -0.26 -0.07 7.11 56.52 0.40 0.33 16 31 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 32 H 0.15 -0.58 6.54 -52.49 -0.34 -0.92 16 33 H 0.40 -1.17 7.85 -40.82 -0.32 -1.49 16 34 H 0.08 -0.13 7.92 -51.93 -0.41 -0.54 16 35 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 36 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 37 H 0.10 -0.40 7.80 -51.93 -0.41 -0.80 16 38 H 0.17 -0.49 8.06 -52.48 -0.42 -0.91 16 39 H 0.15 -0.07 8.06 -52.49 -0.42 -0.49 16 40 H 0.18 -0.04 8.06 -52.49 -0.42 -0.47 16 41 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 42 H 0.09 -0.41 8.08 -51.92 -0.42 -0.83 16 43 H 0.09 0.14 8.14 -51.93 -0.42 -0.28 16 44 H 0.10 0.27 7.40 -51.93 -0.38 -0.12 16 45 H 0.07 -0.04 8.12 -51.93 -0.42 -0.46 16 46 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 47 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 48 H 0.07 -0.11 8.11 -51.93 -0.42 -0.53 16 49 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 50 H 0.10 -0.20 5.67 -51.93 -0.29 -0.50 16 LS Contribution 401.18 15.07 6.05 6.05 Total: 0.00 -10.00 401.18 -12.07 -22.07 By element: Atomic # 1 Polarization: -5.30 SS G_CDS: -7.69 Total: -12.99 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: -4.38 Total: -2.35 kcal Atomic # 7 Polarization: -1.86 SS G_CDS: -0.47 Total: -2.33 kcal Atomic # 8 Polarization: -3.17 SS G_CDS: -0.28 Total: -3.45 kcal Atomic # 14 Polarization: -1.71 SS G_CDS: -5.29 Total: -7.00 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -10.00 -12.07 -22.07 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_16915396.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 102.897 kcal (2) G-P(sol) polarization free energy of solvation -10.002 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.895 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.069 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.071 kcal (6) G-S(sol) free energy of system = (1) + (5) 80.826 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds