Wall clock time and date at job start Tue Mar 9 2021 13:25:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.37947 * 120.07131 * 2 1 4 4 C 1.38379 * 120.14131 * 180.27020 * 3 2 1 5 5 C 1.50701 * 119.85193 * 179.72611 * 4 3 2 6 6 C 1.38345 * 120.29377 * 359.46110 * 4 3 2 7 7 C 1.50697 * 119.92619 * 180.27261 * 6 4 3 8 8 O 1.42900 * 109.47069 * 284.99292 * 7 6 4 9 9 Si 1.86296 * 109.47180 * 164.99525 * 7 6 4 10 10 C 1.37976 * 120.14524 * 0.23948 * 6 4 3 11 11 C 1.39561 * 119.85275 * 0.03235 * 10 6 4 12 12 C 1.47846 * 120.14484 * 179.97438 * 11 10 6 13 13 O 1.21548 * 120.00098 * 173.74874 * 12 11 10 14 14 N 1.34775 * 120.00089 * 353.74644 * 12 11 10 15 15 C 1.46498 * 120.00239 * 180.02562 * 14 12 11 16 16 H 1.09001 * 112.84650 * 336.19609 * 15 14 12 17 17 C 1.53782 * 113.61184 * 107.50285 * 15 14 12 18 18 C 1.53783 * 87.07723 * 139.98388 * 17 15 14 19 19 H 1.09002 * 113.69680 * 89.12730 * 18 17 15 20 20 C 1.53002 * 113.61230 * 220.01467 * 18 17 15 21 21 N 1.46501 * 109.47426 * 272.49793 * 20 18 17 22 22 C 1.34942 * 126.03890 * 124.71323 * 21 20 18 23 23 C 1.35317 * 107.74769 * 179.84096 * 22 21 20 24 24 C 1.39864 * 107.91957 * 0.42257 * 23 22 21 25 25 N 1.30845 * 108.20129 * 359.74305 * 24 23 22 26 26 C 1.53779 * 87.08430 * 334.56421 * 18 17 15 27 27 H 1.08997 * 109.47056 * 263.70251 * 1 2 3 28 28 H 1.08999 * 109.47106 * 23.70426 * 1 2 3 29 29 H 1.08999 * 109.46690 * 143.70116 * 1 2 3 30 30 H 1.07993 * 119.92889 * 0.02562 * 3 2 1 31 31 H 1.08996 * 109.47364 * 269.73152 * 5 4 3 32 32 H 1.08995 * 109.47000 * 29.73026 * 5 4 3 33 33 H 1.09005 * 109.46686 * 149.73164 * 5 4 3 34 34 H 1.08999 * 109.47279 * 44.99320 * 7 6 4 35 35 H 0.96702 * 114.00188 * 180.02562 * 8 7 6 36 36 H 1.48507 * 110.00081 * 59.99742 * 9 7 6 37 37 H 1.48497 * 110.00416 * 181.31838 * 9 7 6 38 38 H 1.07995 * 120.07598 * 180.02562 * 10 6 4 39 39 H 0.97000 * 119.99592 * 359.97438 * 14 12 11 40 40 H 1.09002 * 113.61507 * 254.52492 * 17 15 14 41 41 H 1.08993 * 113.61876 * 25.43548 * 17 15 14 42 42 H 1.09002 * 109.47026 * 32.50136 * 20 18 17 43 43 H 1.09005 * 109.47160 * 152.49464 * 20 18 17 44 44 H 1.08006 * 126.12496 * 0.02562 * 22 21 20 45 45 H 1.07999 * 126.04015 * 180.16127 * 23 22 21 46 46 H 1.07999 * 125.90297 * 179.75620 * 24 23 22 47 47 H 1.09001 * 113.61791 * 270.89060 * 26 18 17 48 48 H 1.08996 * 113.61730 * 139.97925 * 26 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1938 0.0000 4 6 3.5820 1.1955 -0.0056 5 6 4.3305 2.5035 -0.0119 6 6 4.2813 0.0018 -0.0001 7 6 5.7883 0.0134 -0.0001 8 8 6.2619 0.3595 -1.3031 9 14 6.4222 -1.6762 0.4625 10 6 3.6021 -1.1991 0.0062 11 6 2.2066 -1.2080 0.0062 12 6 1.4722 -2.4912 0.0122 13 8 0.2622 -2.4984 0.1269 14 7 2.1445 -3.6529 -0.1093 15 6 1.4168 -4.9244 -0.1039 16 1 0.4518 -4.8576 0.3985 17 6 1.3500 -5.6018 -1.4829 18 6 1.5787 -6.9351 -0.7515 19 1 0.6581 -7.4202 -0.4268 20 6 2.5221 -7.8859 -1.4912 21 7 1.7534 -8.6986 -2.4372 22 6 1.9852 -8.8066 -3.7621 23 6 1.0609 -9.6515 -4.2750 24 6 0.2302 -10.0667 -3.2292 25 7 0.6443 -9.4961 -2.1270 26 6 2.2687 -6.1198 0.3548 27 1 -0.3633 -0.1127 1.0214 28 1 -0.3633 0.9410 -0.4131 29 1 -0.3633 -0.8282 -0.6084 30 1 1.6583 2.1290 0.0004 31 1 4.5110 2.8140 -1.0409 32 1 3.7385 3.2632 0.4983 33 1 5.2834 2.3791 0.5026 34 1 6.1460 0.7463 0.7231 35 1 7.2258 0.3860 -1.3771 36 1 5.9414 -2.6846 -0.5159 37 1 7.9068 -1.6698 0.4972 38 1 4.1492 -2.1303 0.0109 39 1 3.1101 -3.6471 -0.2012 40 1 0.3724 -5.5272 -1.9591 41 1 2.1679 -5.3222 -2.1468 42 1 3.2697 -7.3069 -2.0333 43 1 3.0186 -8.5375 -0.7720 44 1 2.7698 -8.3102 -4.3139 45 1 0.9768 -9.9490 -5.3098 46 1 -0.6082 -10.7420 -3.3163 47 1 3.3378 -5.9816 0.1931 48 1 2.0328 -6.4631 1.3620 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688084_9599494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:25:04 Heat of formation + Delta-G solvation = 68.677731 kcal Electronic energy + Delta-G solvation = -29276.755980 eV Core-core repulsion = 25300.936158 eV Total energy + Delta-G solvation = -3975.819822 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.173 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.06827 -41.65911 -40.56532 -39.29157 -37.76121 -35.36771 -34.44110 -33.91009 -32.91529 -30.94931 -29.50019 -28.80276 -28.14601 -26.87558 -25.59995 -24.42619 -23.60995 -22.28095 -22.01452 -21.46041 -21.11248 -20.32147 -18.68642 -18.58216 -18.30654 -17.54470 -16.95573 -16.46458 -16.34424 -16.20640 -16.09756 -15.82064 -15.40097 -15.12449 -14.83388 -14.66378 -14.57294 -14.53722 -14.21891 -14.02260 -13.85366 -13.72033 -13.63647 -13.47193 -13.36555 -13.18512 -12.95381 -12.87655 -12.73956 -12.57249 -12.26454 -11.96515 -11.90123 -11.86984 -11.56737 -11.46945 -10.62161 -10.51265 -10.26968 -10.10249 -9.86740 -9.57163 -9.44234 -5.13570 -0.18499 0.19147 1.03576 1.10295 1.39902 1.59617 1.73967 1.82183 2.02487 2.09629 2.66338 3.21232 3.27598 3.36520 3.42800 3.55947 3.62318 3.67479 3.70041 3.83522 3.85661 3.96370 4.04137 4.06562 4.14442 4.26164 4.36705 4.37474 4.48199 4.51660 4.54291 4.59636 4.63449 4.67185 4.73787 4.77286 4.85642 4.90311 4.91844 4.93590 4.97025 5.05915 5.10531 5.16153 5.18007 5.31974 5.48265 5.51970 5.60431 5.80012 5.83419 6.12474 6.31770 6.44591 6.84762 7.21331 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C -0.008 4.008 3 C -0.132 4.132 4 C -0.026 4.026 5 C -0.120 4.120 6 C -0.091 4.091 7 C -0.073 4.073 8 O -0.532 6.532 9 Si 0.679 3.321 10 C -0.074 4.074 11 C -0.147 4.147 12 C 0.562 3.438 13 O -0.526 6.526 14 N -0.719 5.719 15 C 0.127 3.873 16 H 0.121 0.879 17 C -0.147 4.147 18 C -0.120 4.120 19 H 0.111 0.889 20 C 0.145 3.855 21 N -0.371 5.371 22 C 0.052 3.948 23 C -0.275 4.275 24 C 0.044 3.956 25 N -0.295 5.295 26 C -0.138 4.138 27 H 0.079 0.921 28 H 0.060 0.940 29 H 0.096 0.904 30 H 0.133 0.867 31 H 0.079 0.921 32 H 0.070 0.930 33 H 0.071 0.929 34 H 0.079 0.921 35 H 0.379 0.621 36 H -0.254 1.254 37 H -0.257 1.257 38 H 0.126 0.874 39 H 0.398 0.602 40 H 0.075 0.925 41 H 0.085 0.915 42 H 0.095 0.905 43 H 0.088 0.912 44 H 0.171 0.829 45 H 0.147 0.853 46 H 0.183 0.817 47 H 0.089 0.911 48 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.522 1.523 1.392 5.894 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C -0.009 4.009 3 C -0.150 4.150 4 C -0.026 4.026 5 C -0.176 4.176 6 C -0.091 4.091 7 C -0.183 4.183 8 O -0.340 6.340 9 Si 0.581 3.419 10 C -0.092 4.092 11 C -0.150 4.150 12 C 0.351 3.649 13 O -0.403 6.403 14 N -0.371 5.371 15 C 0.022 3.978 16 H 0.139 0.861 17 C -0.186 4.186 18 C -0.139 4.139 19 H 0.129 0.871 20 C 0.024 3.976 21 N -0.153 5.153 22 C -0.095 4.095 23 C -0.304 4.304 24 C -0.142 4.142 25 N -0.116 5.116 26 C -0.177 4.177 27 H 0.097 0.903 28 H 0.079 0.921 29 H 0.114 0.886 30 H 0.151 0.849 31 H 0.098 0.902 32 H 0.089 0.911 33 H 0.090 0.910 34 H 0.096 0.904 35 H 0.227 0.773 36 H -0.179 1.179 37 H -0.182 1.182 38 H 0.144 0.856 39 H 0.234 0.766 40 H 0.093 0.907 41 H 0.103 0.897 42 H 0.114 0.886 43 H 0.106 0.894 44 H 0.188 0.812 45 H 0.164 0.836 46 H 0.200 0.800 47 H 0.108 0.892 48 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges 4.393 1.066 2.475 5.154 hybrid contribution 1.534 0.508 -1.889 2.486 sum 5.927 1.574 0.586 6.161 Atomic orbital electron populations 1.21123 0.89634 1.03330 1.03886 1.20103 0.97037 0.91262 0.92504 1.21014 0.93248 0.97902 1.02829 1.19983 0.93509 0.95108 0.93986 1.20911 1.00086 0.93438 1.03183 1.18914 0.93255 0.92738 1.04158 1.24731 0.94339 1.11095 0.88133 1.86621 1.26634 1.91295 1.29404 0.95102 0.80945 0.76533 0.89361 1.21102 0.93241 0.97459 0.97397 1.19597 0.92907 0.93294 1.09181 1.18259 0.87126 0.83618 0.75888 1.90749 1.13565 1.87007 1.48990 1.45930 1.10618 1.05602 1.74913 1.22475 0.97407 0.80830 0.97085 0.86131 1.23572 1.03221 0.94636 0.97186 1.22708 1.00322 0.94136 0.96783 0.87097 1.21741 0.92283 0.92155 0.91437 1.48704 1.24194 1.36127 1.06274 1.22578 1.01217 1.00653 0.85013 1.21553 1.00747 1.07035 1.01094 1.23931 1.00221 0.99753 0.90291 1.77340 1.00764 1.09738 1.23784 1.23384 0.99881 0.94850 0.99566 0.90273 0.92138 0.88596 0.84866 0.90212 0.91148 0.91026 0.90363 0.77293 1.17909 1.18236 0.85622 0.76623 0.90668 0.89692 0.88637 0.89398 0.81154 0.83556 0.80031 0.89210 0.89682 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.25 8.73 36.01 0.31 0.06 16 2 C -0.01 -0.02 5.91 -104.22 -0.62 -0.63 16 3 C -0.13 -0.13 9.31 -39.64 -0.37 -0.50 16 4 C -0.03 -0.02 5.89 -104.53 -0.62 -0.63 16 5 C -0.12 0.12 9.53 36.01 0.34 0.46 16 6 C -0.09 -0.05 5.29 -104.68 -0.55 -0.60 16 7 C -0.07 0.09 2.03 36.00 0.07 0.16 16 8 O -0.53 0.10 12.78 -35.23 -0.45 -0.35 16 9 Si 0.68 -1.57 30.19 -169.99 -5.13 -6.70 16 10 C -0.07 -0.03 8.13 -39.18 -0.32 -0.35 16 11 C -0.15 -0.29 5.87 -104.97 -0.62 -0.91 16 12 C 0.56 1.46 7.70 -12.33 -0.09 1.36 16 13 O -0.53 -2.84 12.95 5.32 0.07 -2.77 16 14 N -0.72 0.16 5.30 -53.96 -0.29 -0.13 16 15 C 0.13 -0.07 4.24 -67.12 -0.28 -0.35 16 16 H 0.12 0.15 7.46 -51.93 -0.39 -0.24 16 17 C -0.15 0.09 7.43 -25.92 -0.19 -0.10 16 18 C -0.12 0.16 3.87 -89.81 -0.35 -0.19 16 19 H 0.11 0.08 7.96 -51.93 -0.41 -0.34 16 20 C 0.15 -0.22 6.35 -4.04 -0.03 -0.25 16 21 N -0.37 -0.56 3.68 -61.36 -0.23 -0.78 16 22 C 0.05 0.03 11.45 -17.23 -0.20 -0.16 16 23 C -0.27 -0.37 10.80 -40.01 -0.43 -0.80 16 24 C 0.04 0.10 12.03 -17.36 -0.21 -0.11 16 25 N -0.29 -1.11 12.27 30.62 0.38 -0.74 16 26 C -0.14 0.38 7.39 -25.92 -0.19 0.19 16 27 H 0.08 0.17 8.14 -51.93 -0.42 -0.25 16 28 H 0.06 0.03 8.04 -51.93 -0.42 -0.39 16 29 H 0.10 0.37 5.86 -51.93 -0.30 0.06 16 30 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 31 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 32 H 0.07 -0.14 8.08 -51.93 -0.42 -0.56 16 33 H 0.07 -0.13 6.22 -51.93 -0.32 -0.45 16 34 H 0.08 -0.22 6.48 -51.93 -0.34 -0.56 16 35 H 0.38 -1.53 8.74 45.56 0.40 -1.13 16 36 H -0.25 0.11 6.75 56.52 0.38 0.50 16 37 H -0.26 0.07 7.11 56.52 0.40 0.47 16 38 H 0.13 -0.20 3.29 -52.49 -0.17 -0.38 16 39 H 0.40 -0.93 6.80 -40.82 -0.28 -1.20 16 40 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 41 H 0.08 -0.11 7.90 -51.93 -0.41 -0.52 16 42 H 0.10 -0.36 7.77 -51.93 -0.40 -0.76 16 43 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 44 H 0.17 -0.44 8.06 -52.48 -0.42 -0.86 16 45 H 0.15 -0.06 8.06 -52.49 -0.42 -0.49 16 46 H 0.18 -0.06 8.06 -52.49 -0.42 -0.48 16 47 H 0.09 -0.39 8.08 -51.93 -0.42 -0.81 16 48 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 LS Contribution 388.58 15.07 5.86 5.86 Total: 0.00 -8.91 388.58 -11.04 -19.94 By element: Atomic # 1 Polarization: -4.06 SS G_CDS: -6.91 Total: -10.97 kcal Atomic # 6 Polarization: 0.98 SS G_CDS: -4.33 Total: -3.35 kcal Atomic # 7 Polarization: -1.51 SS G_CDS: -0.14 Total: -1.65 kcal Atomic # 8 Polarization: -2.74 SS G_CDS: -0.38 Total: -3.13 kcal Atomic # 14 Polarization: -1.57 SS G_CDS: -5.13 Total: -6.70 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -8.91 -11.04 -19.94 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_9599494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.620 kcal (2) G-P(sol) polarization free energy of solvation -8.905 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 79.715 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.037 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.942 kcal (6) G-S(sol) free energy of system = (1) + (5) 68.678 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds