Wall clock time and date at job start Tue Mar 9 2021 13:24:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.37947 * 120.07131 * 2 1 4 4 C 1.38379 * 120.14131 * 180.27020 * 3 2 1 5 5 C 1.50701 * 119.85193 * 179.72611 * 4 3 2 6 6 C 1.38345 * 120.29377 * 359.46110 * 4 3 2 7 7 C 1.50697 * 119.92619 * 180.27261 * 6 4 3 8 8 O 1.42900 * 109.47069 * 284.99292 * 7 6 4 9 9 Si 1.86296 * 109.47180 * 164.99525 * 7 6 4 10 10 C 1.37976 * 120.14524 * 0.23948 * 6 4 3 11 11 C 1.39561 * 119.85275 * 0.03235 * 10 6 4 12 12 C 1.47846 * 120.14484 * 179.97438 * 11 10 6 13 13 O 1.21548 * 120.00098 * 173.74874 * 12 11 10 14 14 N 1.34775 * 120.00089 * 353.74644 * 12 11 10 15 15 C 1.46498 * 120.00239 * 180.02562 * 14 12 11 16 16 H 1.09001 * 112.84650 * 336.19609 * 15 14 12 17 17 C 1.53782 * 113.61184 * 107.50285 * 15 14 12 18 18 C 1.53783 * 87.07723 * 139.98388 * 17 15 14 19 19 H 1.09002 * 113.69680 * 89.12730 * 18 17 15 20 20 C 1.53002 * 113.61230 * 220.01467 * 18 17 15 21 21 N 1.46501 * 109.47426 * 272.49793 * 20 18 17 22 22 C 1.34942 * 126.03890 * 124.71323 * 21 20 18 23 23 C 1.35317 * 107.74769 * 179.84096 * 22 21 20 24 24 C 1.39864 * 107.91957 * 0.42257 * 23 22 21 25 25 N 1.30845 * 108.20129 * 359.74305 * 24 23 22 26 26 C 1.53779 * 87.08430 * 334.56421 * 18 17 15 27 27 H 1.08997 * 109.47056 * 263.70251 * 1 2 3 28 28 H 1.08999 * 109.47106 * 23.70426 * 1 2 3 29 29 H 1.08999 * 109.46690 * 143.70116 * 1 2 3 30 30 H 1.07993 * 119.92889 * 0.02562 * 3 2 1 31 31 H 1.08996 * 109.47364 * 269.73152 * 5 4 3 32 32 H 1.08995 * 109.47000 * 29.73026 * 5 4 3 33 33 H 1.09005 * 109.46686 * 149.73164 * 5 4 3 34 34 H 1.08999 * 109.47279 * 44.99320 * 7 6 4 35 35 H 0.96702 * 114.00188 * 180.02562 * 8 7 6 36 36 H 1.48507 * 110.00081 * 59.99742 * 9 7 6 37 37 H 1.48497 * 110.00416 * 181.31838 * 9 7 6 38 38 H 1.07995 * 120.07598 * 180.02562 * 10 6 4 39 39 H 0.97000 * 119.99592 * 359.97438 * 14 12 11 40 40 H 1.09002 * 113.61507 * 254.52492 * 17 15 14 41 41 H 1.08993 * 113.61876 * 25.43548 * 17 15 14 42 42 H 1.09002 * 109.47026 * 32.50136 * 20 18 17 43 43 H 1.09005 * 109.47160 * 152.49464 * 20 18 17 44 44 H 1.08006 * 126.12496 * 0.02562 * 22 21 20 45 45 H 1.07999 * 126.04015 * 180.16127 * 23 22 21 46 46 H 1.07999 * 125.90297 * 179.75620 * 24 23 22 47 47 H 1.09001 * 113.61791 * 270.89060 * 26 18 17 48 48 H 1.08996 * 113.61730 * 139.97925 * 26 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1938 0.0000 4 6 3.5820 1.1955 -0.0056 5 6 4.3305 2.5035 -0.0119 6 6 4.2813 0.0018 -0.0001 7 6 5.7883 0.0134 -0.0001 8 8 6.2619 0.3595 -1.3031 9 14 6.4222 -1.6762 0.4625 10 6 3.6021 -1.1991 0.0062 11 6 2.2066 -1.2080 0.0062 12 6 1.4722 -2.4912 0.0122 13 8 0.2622 -2.4984 0.1269 14 7 2.1445 -3.6529 -0.1093 15 6 1.4168 -4.9244 -0.1039 16 1 0.4518 -4.8576 0.3985 17 6 1.3500 -5.6018 -1.4829 18 6 1.5787 -6.9351 -0.7515 19 1 0.6581 -7.4202 -0.4268 20 6 2.5221 -7.8859 -1.4912 21 7 1.7534 -8.6986 -2.4372 22 6 1.9852 -8.8066 -3.7621 23 6 1.0609 -9.6515 -4.2750 24 6 0.2302 -10.0667 -3.2292 25 7 0.6443 -9.4961 -2.1270 26 6 2.2687 -6.1198 0.3548 27 1 -0.3633 -0.1127 1.0214 28 1 -0.3633 0.9410 -0.4131 29 1 -0.3633 -0.8282 -0.6084 30 1 1.6583 2.1290 0.0004 31 1 4.5110 2.8140 -1.0409 32 1 3.7385 3.2632 0.4983 33 1 5.2834 2.3791 0.5026 34 1 6.1460 0.7463 0.7231 35 1 7.2258 0.3860 -1.3771 36 1 5.9414 -2.6846 -0.5159 37 1 7.9068 -1.6698 0.4972 38 1 4.1492 -2.1303 0.0109 39 1 3.1101 -3.6471 -0.2012 40 1 0.3724 -5.5272 -1.9591 41 1 2.1679 -5.3222 -2.1468 42 1 3.2697 -7.3069 -2.0333 43 1 3.0186 -8.5375 -0.7720 44 1 2.7698 -8.3102 -4.3139 45 1 0.9768 -9.9490 -5.3098 46 1 -0.6082 -10.7420 -3.3163 47 1 3.3378 -5.9816 0.1931 48 1 2.0328 -6.4631 1.3620 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688084_9599494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:24:58 Heat of formation + Delta-G solvation = 70.928119 kcal Electronic energy + Delta-G solvation = -29276.658396 eV Core-core repulsion = 25300.936158 eV Total energy + Delta-G solvation = -3975.722238 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 342.173 amu Computer time = 5.38 seconds Orbital eigenvalues (eV) -42.10138 -41.73346 -40.55213 -39.35559 -37.69977 -35.44126 -34.48069 -33.92571 -32.93245 -31.00238 -29.52917 -28.81348 -28.11794 -26.77909 -25.59135 -24.43612 -23.61050 -22.34641 -22.04057 -21.50992 -21.14158 -20.29481 -18.64233 -18.54711 -18.31256 -17.55540 -16.93980 -16.47319 -16.33785 -16.23582 -16.17130 -15.86242 -15.36989 -15.13743 -14.83474 -14.68873 -14.61075 -14.51479 -14.21341 -13.95550 -13.91972 -13.68848 -13.51992 -13.45855 -13.33708 -13.13227 -12.91753 -12.87830 -12.75705 -12.60796 -12.25333 -11.91432 -11.84605 -11.83158 -11.57265 -11.47993 -10.74963 -10.42037 -10.34765 -10.18653 -9.89966 -9.62090 -9.48940 -4.92614 -0.25959 0.15945 0.99118 1.27640 1.57788 1.64910 1.70208 1.91035 1.94340 2.05316 2.60742 3.31732 3.35370 3.47183 3.49681 3.57203 3.63837 3.75178 3.75435 3.83907 3.90869 4.06613 4.11213 4.13860 4.19747 4.32126 4.44638 4.48794 4.51109 4.57706 4.59661 4.64100 4.67752 4.73777 4.75877 4.78266 4.80652 4.88330 4.90620 4.93604 5.00401 5.05458 5.11949 5.14518 5.18417 5.27644 5.47561 5.49385 5.52943 5.74363 5.80278 6.17512 6.41508 6.61294 6.77168 7.11100 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.027 4.027 3 C -0.137 4.137 4 C -0.033 4.033 5 C -0.118 4.118 6 C -0.099 4.099 7 C -0.084 4.084 8 O -0.553 6.553 9 Si 0.748 3.252 10 C -0.072 4.072 11 C -0.161 4.161 12 C 0.557 3.443 13 O -0.563 6.563 14 N -0.705 5.705 15 C 0.120 3.880 16 H 0.096 0.904 17 C -0.143 4.143 18 C -0.114 4.114 19 H 0.084 0.916 20 C 0.139 3.861 21 N -0.375 5.375 22 C 0.052 3.948 23 C -0.294 4.294 24 C 0.028 3.972 25 N -0.337 5.337 26 C -0.118 4.118 27 H 0.072 0.928 28 H 0.073 0.927 29 H 0.074 0.926 30 H 0.147 0.853 31 H 0.075 0.925 32 H 0.080 0.920 33 H 0.081 0.919 34 H 0.097 0.903 35 H 0.394 0.606 36 H -0.276 1.276 37 H -0.284 1.284 38 H 0.145 0.855 39 H 0.411 0.589 40 H 0.047 0.953 41 H 0.100 0.900 42 H 0.126 0.874 43 H 0.096 0.904 44 H 0.204 0.796 45 H 0.160 0.840 46 H 0.196 0.804 47 H 0.119 0.881 48 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.137 1.983 1.377 8.488 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.028 4.028 3 C -0.154 4.154 4 C -0.034 4.034 5 C -0.174 4.174 6 C -0.099 4.099 7 C -0.193 4.193 8 O -0.363 6.363 9 Si 0.651 3.349 10 C -0.090 4.090 11 C -0.164 4.164 12 C 0.346 3.654 13 O -0.444 6.444 14 N -0.357 5.357 15 C 0.015 3.985 16 H 0.114 0.886 17 C -0.182 4.182 18 C -0.134 4.134 19 H 0.103 0.897 20 C 0.019 3.981 21 N -0.157 5.157 22 C -0.094 4.094 23 C -0.323 4.323 24 C -0.157 4.157 25 N -0.159 5.159 26 C -0.157 4.157 27 H 0.091 0.909 28 H 0.092 0.908 29 H 0.093 0.907 30 H 0.165 0.835 31 H 0.094 0.906 32 H 0.099 0.901 33 H 0.100 0.900 34 H 0.114 0.886 35 H 0.245 0.755 36 H -0.202 1.202 37 H -0.211 1.211 38 H 0.162 0.838 39 H 0.249 0.751 40 H 0.066 0.934 41 H 0.118 0.882 42 H 0.144 0.856 43 H 0.114 0.886 44 H 0.221 0.779 45 H 0.178 0.822 46 H 0.212 0.788 47 H 0.137 0.863 48 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 7.036 1.526 2.469 7.611 hybrid contribution 0.758 0.404 -1.924 2.107 sum 7.794 1.930 0.545 8.047 Atomic orbital electron populations 1.21009 0.90153 1.03062 1.03139 1.20233 0.96969 0.92043 0.93588 1.21193 0.93687 0.97988 1.02575 1.20279 0.93538 0.96105 0.93437 1.20938 1.00558 0.92773 1.03165 1.19216 0.94468 0.92643 1.03561 1.24951 0.93162 1.12889 0.88261 1.86572 1.28264 1.91528 1.29912 0.94294 0.78336 0.74337 0.87889 1.21267 0.92569 0.98422 0.96717 1.19660 0.93685 0.92893 1.10125 1.18490 0.86802 0.84541 0.75528 1.90734 1.15159 1.87560 1.50942 1.45831 1.11174 1.04941 1.73709 1.22459 0.97213 0.81435 0.97417 0.88634 1.23552 1.02316 0.95235 0.97107 1.22530 0.99756 0.93748 0.97320 0.89733 1.22024 0.92263 0.92133 0.91678 1.48962 1.23748 1.35900 1.07130 1.23159 1.01454 1.00012 0.84811 1.21863 1.01063 1.07684 1.01676 1.24320 1.00881 0.99960 0.90501 1.77267 1.02436 1.11236 1.24957 1.23333 1.00883 0.92273 0.99169 0.90932 0.90821 0.90744 0.83533 0.90623 0.90134 0.89990 0.88569 0.75512 1.20215 1.21054 0.83804 0.75120 0.93368 0.88157 0.85605 0.88630 0.77887 0.82239 0.78757 0.86322 0.89293 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.71 8.73 71.24 0.62 -0.09 16 2 C -0.03 -0.15 5.91 -19.61 -0.12 -0.26 16 3 C -0.14 -0.30 9.31 22.23 0.21 -0.09 16 4 C -0.03 -0.03 5.89 -19.80 -0.12 -0.15 16 5 C -0.12 0.36 9.53 71.24 0.68 1.04 16 6 C -0.10 -0.03 5.29 -19.90 -0.11 -0.13 16 7 C -0.08 0.33 2.03 71.23 0.14 0.47 16 8 O -0.55 0.91 12.78 -148.98 -1.90 -1.00 16 9 Si 0.75 -4.67 30.19 68.60 2.07 -2.60 16 10 C -0.07 -0.03 8.13 22.53 0.18 0.16 16 11 C -0.16 -0.77 5.87 -20.09 -0.12 -0.88 16 12 C 0.56 3.69 7.70 86.79 0.67 4.36 16 13 O -0.56 -7.66 12.95 -3.87 -0.05 -7.71 16 14 N -0.71 0.13 5.30 -442.91 -2.35 -2.22 16 15 C 0.12 -0.03 4.24 45.52 0.19 0.17 16 16 H 0.10 0.49 7.46 -2.39 -0.02 0.47 16 17 C -0.14 0.08 7.43 31.12 0.23 0.31 16 18 C -0.11 0.27 3.87 -10.27 -0.04 0.23 16 19 H 0.08 0.29 7.96 -2.39 -0.02 0.27 16 20 C 0.14 -0.57 6.35 86.38 0.55 -0.03 16 21 N -0.37 -1.10 3.68 -348.05 -1.28 -2.38 16 22 C 0.05 0.03 11.45 83.54 0.96 0.98 16 23 C -0.29 -0.84 10.80 21.99 0.24 -0.60 16 24 C 0.03 0.17 12.03 85.23 1.02 1.19 16 25 N -0.34 -2.97 12.27 -57.02 -0.70 -3.67 16 26 C -0.12 0.76 7.39 31.12 0.23 0.99 16 27 H 0.07 0.48 8.14 -2.39 -0.02 0.46 16 28 H 0.07 0.18 8.04 -2.39 -0.02 0.16 16 29 H 0.07 0.79 5.86 -2.39 -0.01 0.78 16 30 H 0.15 -0.22 8.06 -2.91 -0.02 -0.25 16 31 H 0.08 -0.14 8.14 -2.39 -0.02 -0.16 16 32 H 0.08 -0.42 8.08 -2.39 -0.02 -0.44 16 33 H 0.08 -0.43 6.22 -2.38 -0.01 -0.45 16 34 H 0.10 -0.74 6.48 -2.39 -0.02 -0.75 16 35 H 0.39 -3.70 8.74 -74.06 -0.65 -4.35 16 36 H -0.28 0.75 6.75 99.48 0.67 1.42 16 37 H -0.28 0.49 7.11 99.48 0.71 1.20 16 38 H 0.14 -0.65 3.29 -2.91 -0.01 -0.66 16 39 H 0.41 -2.36 6.80 -92.71 -0.63 -2.99 16 40 H 0.05 0.24 8.14 -2.39 -0.02 0.22 16 41 H 0.10 -0.37 7.90 -2.39 -0.02 -0.38 16 42 H 0.13 -1.29 7.77 -2.39 -0.02 -1.31 16 43 H 0.10 -0.52 8.14 -2.38 -0.02 -0.53 16 44 H 0.20 -1.50 8.06 -2.91 -0.02 -1.52 16 45 H 0.16 -0.16 8.06 -2.91 -0.02 -0.18 16 46 H 0.20 0.17 8.06 -2.91 -0.02 0.14 16 47 H 0.12 -1.40 8.08 -2.39 -0.02 -1.42 16 48 H 0.09 -0.57 8.14 -2.39 -0.02 -0.59 16 Total: 0.00 -23.70 388.58 0.94 -22.76 By element: Atomic # 1 Polarization: -10.58 SS G_CDS: -0.28 Total: -10.86 kcal Atomic # 6 Polarization: 2.23 SS G_CDS: 5.43 Total: 7.66 kcal Atomic # 7 Polarization: -3.94 SS G_CDS: -4.33 Total: -8.27 kcal Atomic # 8 Polarization: -6.75 SS G_CDS: -1.95 Total: -8.70 kcal Atomic # 14 Polarization: -4.67 SS G_CDS: 2.07 Total: -2.60 kcal Total: -23.70 0.94 -22.76 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688084_9599494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 93.691 kcal (2) G-P(sol) polarization free energy of solvation -23.705 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 69.987 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.942 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.763 kcal (6) G-S(sol) free energy of system = (1) + (5) 70.928 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 5.39 seconds