Wall clock time and date at job start Tue Mar 9 2021 13:27:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.34661 * 124.85208 * 2 1 4 4 C 1.36774 * 108.39297 * 180.13534 * 3 2 1 5 5 C 1.47264 * 126.93515 * 179.87355 * 4 3 2 6 6 O 1.21630 * 119.99829 * 179.68684 * 5 4 3 7 7 N 1.34776 * 120.00416 * 359.68413 * 5 4 3 8 8 C 1.46496 * 120.00015 * 180.02562 * 7 5 4 9 9 H 1.09004 * 112.90889 * 336.25053 * 8 7 5 10 10 C 1.53784 * 113.61524 * 107.50411 * 8 7 5 11 11 C 1.53779 * 87.08045 * 89.11591 * 10 8 7 12 12 H 1.09001 * 113.69124 * 270.87427 * 11 10 8 13 13 C 1.52998 * 113.61561 * 139.98260 * 11 10 8 14 14 N 1.46496 * 109.47269 * 87.50029 * 13 11 10 15 15 C 1.34948 * 126.04000 * 124.71718 * 14 13 11 16 16 C 1.35315 * 107.75038 * 179.84068 * 15 14 13 17 17 C 1.39870 * 107.91933 * 0.42395 * 16 15 14 18 18 N 1.30838 * 108.19953 * 359.73745 * 17 16 15 19 19 C 1.53779 * 87.08402 * 25.43458 * 11 10 8 20 20 C 1.46685 * 106.11933 * 359.61162 * 4 3 2 21 21 C 1.34487 * 106.33236 * 0.23940 * 20 4 3 22 22 C 1.50695 * 125.57214 * 179.97438 * 21 20 4 23 23 O 1.42904 * 109.47193 * 210.02097 * 22 21 20 24 24 Si 1.86302 * 109.47315 * 330.02499 * 22 21 20 25 25 H 1.08995 * 109.47432 * 270.30829 * 1 2 3 26 26 H 1.08999 * 109.47162 * 30.30859 * 1 2 3 27 27 H 1.09002 * 109.47387 * 150.30641 * 1 2 3 28 28 H 1.08000 * 125.80213 * 0.02853 * 3 2 1 29 29 H 0.96998 * 119.99607 * 0.02562 * 7 5 4 30 30 H 1.09002 * 113.61478 * 203.66556 * 10 8 7 31 31 H 1.09004 * 113.61162 * 334.56734 * 10 8 7 32 32 H 1.09007 * 109.47269 * 207.50282 * 13 11 10 33 33 H 1.08998 * 109.47235 * 327.49891 * 13 11 10 34 34 H 1.08008 * 126.12646 * 359.97438 * 15 14 13 35 35 H 1.07998 * 126.04506 * 180.15949 * 16 15 14 36 36 H 1.07999 * 125.90266 * 179.71649 * 17 16 15 37 37 H 1.08997 * 113.61646 * 220.02209 * 19 11 10 38 38 H 1.09000 * 113.61527 * 89.11480 * 19 11 10 39 39 H 1.07999 * 126.83134 * 180.25603 * 20 4 3 40 40 H 1.09003 * 109.47293 * 90.02326 * 22 21 20 41 41 H 0.96705 * 113.99797 * 60.00308 * 23 22 21 42 42 H 1.48501 * 109.99580 * 58.67899 * 24 22 21 43 43 H 1.48500 * 110.00095 * 179.97438 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5462 0.7175 -0.0031 5 6 4.7283 1.5957 -0.0068 6 8 5.8446 1.1127 -0.0035 7 7 4.5734 2.9345 -0.0138 8 6 5.7494 3.8080 -0.0181 9 1 6.6379 3.3253 0.3891 10 6 5.9917 4.5085 -1.3655 11 6 5.0869 5.6402 -0.8504 12 1 4.0304 5.4925 -1.0743 13 6 5.5831 7.0389 -1.2222 14 7 5.0583 7.4094 -2.5388 15 6 4.3431 8.5173 -2.8254 16 6 4.0535 8.4910 -4.1469 17 6 4.6024 7.3222 -4.6845 18 7 5.2049 6.6731 -3.7215 19 6 5.4824 5.2036 0.5700 20 6 3.5375 -0.7493 0.0045 21 6 2.2447 -1.1198 0.0060 22 6 1.7397 -2.5396 0.0127 23 8 0.4811 -2.6007 -0.6614 24 14 2.9653 -3.6388 -0.8594 25 1 -0.3634 0.0055 1.0276 26 1 -0.3633 0.8872 -0.5186 27 1 -0.3634 -0.8927 -0.5091 28 1 1.8767 2.1241 0.0004 29 1 3.6831 3.3196 -0.0161 30 1 7.0269 4.8129 -1.5195 31 1 5.5762 3.9709 -2.2180 32 1 5.2375 7.7567 -0.4781 33 1 6.6727 7.0421 -1.2513 34 1 4.0555 9.2882 -2.1258 35 1 3.4935 9.2380 -4.6898 36 1 4.5394 7.0093 -5.7163 37 1 4.6559 5.2272 1.2802 38 1 6.3784 5.6981 0.9452 39 1 4.3981 -1.4018 0.0084 40 1 1.6174 -2.8770 1.0419 41 1 0.5150 -2.3142 -1.5844 42 1 4.2869 -3.5595 -0.1869 43 1 2.4792 -5.0420 -0.8592 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688104_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:27:43 Heat of formation + Delta-G solvation = 100.549839 kcal Electronic energy + Delta-G solvation = -25812.491820 eV Core-core repulsion = 22056.391925 eV Total energy + Delta-G solvation = -3756.099895 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.49246 -42.03069 -40.90956 -39.04579 -37.90296 -34.92780 -33.86707 -33.33569 -31.37316 -30.89072 -28.66880 -27.59126 -26.74142 -26.34542 -24.53041 -23.42738 -21.90671 -21.57292 -21.03013 -20.77867 -20.17523 -19.05370 -18.17678 -17.41593 -17.07412 -16.86499 -16.75357 -16.29668 -15.94347 -15.78689 -15.45137 -15.42657 -15.12674 -14.86983 -14.85519 -14.57563 -14.32188 -14.06206 -13.74422 -13.60219 -13.48179 -13.42634 -13.39319 -13.10791 -12.83396 -12.26533 -12.18353 -11.95894 -11.62281 -11.52344 -11.25605 -10.78877 -10.75580 -10.27420 -9.95267 -9.56036 -9.45531 -9.22316 -5.01037 0.76367 1.03965 1.04208 1.39044 1.61366 1.64426 1.85239 2.01942 2.03149 2.27506 2.68628 3.11434 3.26051 3.41977 3.51135 3.61327 3.76176 3.76534 3.80248 3.95626 4.00423 4.10434 4.16358 4.21608 4.27978 4.34131 4.37329 4.44234 4.57143 4.60651 4.68606 4.74700 4.79173 4.90385 4.93719 4.98768 5.00924 5.15564 5.16673 5.17481 5.62564 5.72271 5.80016 5.95590 6.12844 6.13612 6.28312 6.66682 6.85852 7.48276 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.049 3.951 2 N -0.423 5.423 3 C 0.051 3.949 4 C -0.226 4.226 5 C 0.594 3.406 6 O -0.540 6.540 7 N -0.714 5.714 8 C 0.122 3.878 9 H 0.106 0.894 10 C -0.134 4.134 11 C -0.121 4.121 12 H 0.093 0.907 13 C 0.141 3.859 14 N -0.371 5.371 15 C 0.049 3.951 16 C -0.275 4.275 17 C 0.040 3.960 18 N -0.288 5.288 19 C -0.138 4.138 20 C -0.135 4.135 21 C -0.020 4.020 22 C -0.042 4.042 23 O -0.542 6.542 24 Si 0.716 3.284 25 H 0.073 0.927 26 H 0.081 0.919 27 H 0.115 0.885 28 H 0.169 0.831 29 H 0.396 0.604 30 H 0.091 0.909 31 H 0.076 0.924 32 H 0.097 0.903 33 H 0.088 0.912 34 H 0.172 0.828 35 H 0.146 0.854 36 H 0.182 0.818 37 H 0.077 0.923 38 H 0.100 0.900 39 H 0.152 0.848 40 H 0.118 0.882 41 H 0.381 0.619 42 H -0.251 1.251 43 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.472 4.191 -0.273 6.898 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 N -0.098 5.098 3 C -0.086 4.086 4 C -0.237 4.237 5 C 0.383 3.617 6 O -0.417 6.417 7 N -0.365 5.365 8 C 0.016 3.984 9 H 0.124 0.876 10 C -0.172 4.172 11 C -0.140 4.140 12 H 0.111 0.889 13 C 0.020 3.980 14 N -0.154 5.154 15 C -0.097 4.097 16 C -0.305 4.305 17 C -0.146 4.146 18 N -0.109 5.109 19 C -0.177 4.177 20 C -0.160 4.160 21 C -0.129 4.129 22 C -0.153 4.153 23 O -0.348 6.348 24 Si 0.615 3.385 25 H 0.091 0.909 26 H 0.100 0.900 27 H 0.133 0.867 28 H 0.186 0.814 29 H 0.230 0.770 30 H 0.110 0.890 31 H 0.095 0.905 32 H 0.115 0.885 33 H 0.106 0.894 34 H 0.189 0.811 35 H 0.164 0.836 36 H 0.199 0.801 37 H 0.096 0.904 38 H 0.118 0.882 39 H 0.170 0.830 40 H 0.135 0.865 41 H 0.229 0.771 42 H -0.175 1.175 43 H -0.176 1.176 Dipole moment (debyes) X Y Z Total from point charges -3.951 1.815 0.847 4.429 hybrid contribution -1.341 1.685 0.372 2.185 sum -5.292 3.499 1.219 6.460 Atomic orbital electron populations 1.22574 0.76248 1.06096 1.04249 1.43485 1.07017 1.04846 1.54436 1.21912 0.90135 0.91785 1.04741 1.20275 0.91438 0.93921 1.18028 1.17385 0.88108 0.81135 0.75063 1.90790 1.25836 1.75089 1.49949 1.45469 1.08881 1.05613 1.76558 1.21784 0.89845 0.89662 0.97123 0.87588 1.23403 1.00148 0.95923 0.97760 1.22891 1.00735 0.93547 0.96839 0.88865 1.21805 0.99725 0.97212 0.79245 1.48760 1.41889 1.16689 1.08044 1.22600 0.97082 0.92132 0.97897 1.21551 1.12256 1.02479 0.94182 1.23949 0.97283 0.94102 0.99234 1.77413 1.23676 1.19164 0.90671 1.23363 1.02940 0.95747 0.95662 1.21729 0.94972 0.93236 1.06026 1.20751 0.90560 0.89097 1.12514 1.24841 0.93383 0.94905 1.02138 1.86449 1.30060 1.89247 1.29043 0.94050 0.76831 0.77577 0.90033 0.90866 0.89998 0.86738 0.81378 0.76978 0.89005 0.90519 0.88497 0.89423 0.81118 0.83620 0.80140 0.90434 0.88198 0.83029 0.86484 0.77088 1.17473 1.17647 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.16 10.71 59.84 0.64 0.48 16 2 N -0.42 0.25 3.09 -119.90 -0.37 -0.12 16 3 C 0.05 -0.02 10.83 -16.84 -0.18 -0.20 16 4 C -0.23 -0.57 6.29 -103.35 -0.65 -1.22 16 5 C 0.59 2.36 7.81 -12.59 -0.10 2.26 16 6 O -0.54 -4.39 16.57 5.25 0.09 -4.30 16 7 N -0.71 -0.34 5.25 -54.14 -0.28 -0.62 16 8 C 0.12 0.02 4.32 -67.12 -0.29 -0.27 16 9 H 0.11 0.22 7.46 -51.93 -0.39 -0.17 16 10 C -0.13 -0.03 7.43 -25.92 -0.19 -0.23 16 11 C -0.12 0.22 3.70 -89.81 -0.33 -0.11 16 12 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 13 C 0.14 -0.26 6.35 -4.04 -0.03 -0.29 16 14 N -0.37 -0.37 3.68 -61.37 -0.23 -0.60 16 15 C 0.05 0.00 11.45 -17.22 -0.20 -0.20 16 16 C -0.28 -0.22 10.80 -40.01 -0.43 -0.65 16 17 C 0.04 0.08 12.03 -17.36 -0.21 -0.13 16 18 N -0.29 -0.95 12.42 30.62 0.38 -0.57 16 19 C -0.14 0.38 7.39 -25.92 -0.19 0.19 16 20 C -0.14 -0.36 9.49 -37.50 -0.36 -0.72 16 21 C -0.02 -0.01 6.14 -81.86 -0.50 -0.51 16 22 C -0.04 0.03 2.98 36.00 0.11 0.14 16 23 O -0.54 0.97 9.95 -35.23 -0.35 0.62 16 24 Si 0.72 -0.67 31.29 -169.99 -5.32 -5.99 16 25 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 26 H 0.08 -0.40 8.13 -51.93 -0.42 -0.82 16 27 H 0.11 -0.41 4.94 -51.93 -0.26 -0.67 16 28 H 0.17 -0.64 7.45 -52.49 -0.39 -1.03 16 29 H 0.40 -0.86 7.64 -40.82 -0.31 -1.17 16 30 H 0.09 0.02 7.90 -51.93 -0.41 -0.39 16 31 H 0.08 0.19 8.14 -51.93 -0.42 -0.23 16 32 H 0.10 -0.41 8.07 -51.93 -0.42 -0.83 16 33 H 0.09 -0.17 7.84 -51.93 -0.41 -0.58 16 34 H 0.17 -0.56 8.06 -52.48 -0.42 -0.98 16 35 H 0.15 -0.14 8.06 -52.49 -0.42 -0.57 16 36 H 0.18 -0.11 8.06 -52.49 -0.42 -0.53 16 37 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 38 H 0.10 -0.37 8.10 -51.93 -0.42 -0.79 16 39 H 0.15 0.48 6.67 -52.49 -0.35 0.13 16 40 H 0.12 -0.04 7.96 -51.93 -0.41 -0.46 16 41 H 0.38 -1.99 8.38 45.56 0.38 -1.61 16 42 H -0.25 -0.49 6.77 56.52 0.38 -0.11 16 43 H -0.25 -0.42 7.11 56.52 0.40 -0.02 16 LS Contribution 361.15 15.07 5.44 5.44 Total: 0.00 -10.73 361.15 -9.54 -20.27 By element: Atomic # 1 Polarization: -6.68 SS G_CDS: -5.98 Total: -12.67 kcal Atomic # 6 Polarization: 1.45 SS G_CDS: -2.91 Total: -1.46 kcal Atomic # 7 Polarization: -1.41 SS G_CDS: -0.50 Total: -1.91 kcal Atomic # 8 Polarization: -3.42 SS G_CDS: -0.26 Total: -3.68 kcal Atomic # 14 Polarization: -0.67 SS G_CDS: -5.32 Total: -5.99 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -10.73 -9.54 -20.27 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688104_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 120.819 kcal (2) G-P(sol) polarization free energy of solvation -10.733 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 110.086 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.536 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.269 kcal (6) G-S(sol) free energy of system = (1) + (5) 100.550 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds