Wall clock time and date at job start Tue Mar 9 2021 12:52:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86298 * 109.47636 * 2 1 4 4 C 1.50701 * 109.46660 * 119.99886 * 2 1 3 5 5 C 1.38239 * 120.00157 * 64.99730 * 4 2 1 6 6 C 1.38232 * 119.99980 * 179.97438 * 5 4 2 7 7 C 1.38242 * 120.00132 * 359.95389 * 6 5 4 8 8 C 1.50703 * 119.99660 * 180.02562 * 7 6 5 9 9 C 1.50692 * 109.46879 * 90.00634 * 8 7 6 10 10 O 1.21284 * 120.00657 * 359.97438 * 9 8 7 11 11 N 1.34788 * 120.00020 * 179.97438 * 9 8 7 12 12 C 1.46495 * 119.99843 * 180.02562 * 11 9 8 13 13 H 1.08996 * 112.85871 * 23.79825 * 12 11 9 14 14 C 1.53781 * 113.61307 * 154.99869 * 12 11 9 15 15 C 1.53783 * 87.08306 * 89.11069 * 14 12 11 16 16 H 1.08998 * 113.61300 * 270.79937 * 15 14 12 17 17 C 1.52999 * 113.61446 * 139.98057 * 15 14 12 18 18 N 1.46500 * 109.47084 * 174.99740 * 17 15 14 19 19 C 1.34429 * 126.81895 * 124.99739 * 18 17 15 20 20 N 1.30837 * 108.07952 * 180.02562 * 19 18 17 21 21 C 1.33246 * 109.82318 * 359.97438 * 20 19 18 22 22 N 1.30712 * 108.94935 * 0.27015 * 21 20 19 23 23 C 1.53783 * 113.61117 * 252.49203 * 12 11 9 24 24 C 1.38232 * 119.99721 * 0.27611 * 7 6 5 25 25 C 1.38233 * 120.00263 * 359.51827 * 24 7 6 26 26 H 0.96706 * 113.99863 * 300.00808 * 1 2 3 27 27 H 1.08995 * 109.47084 * 239.99221 * 2 1 3 28 28 H 1.48503 * 109.99879 * 178.68075 * 3 2 1 29 29 H 1.48497 * 109.99768 * 299.99955 * 3 2 1 30 30 H 1.07996 * 120.00049 * 359.97438 * 5 4 2 31 31 H 1.08001 * 120.00174 * 179.97438 * 6 5 4 32 32 H 1.08995 * 109.47171 * 329.99823 * 8 7 6 33 33 H 1.09003 * 109.46745 * 209.99625 * 8 7 6 34 34 H 0.96998 * 119.99685 * 359.97438 * 11 9 8 35 35 H 1.09001 * 113.61192 * 334.56408 * 14 12 11 36 36 H 1.09000 * 113.61565 * 203.65678 * 14 12 11 37 37 H 1.09002 * 109.47279 * 55.00027 * 17 15 14 38 38 H 1.08995 * 109.47424 * 295.00206 * 17 15 14 39 39 H 1.08000 * 125.96340 * 359.97438 * 19 18 17 40 40 H 1.08002 * 125.52127 * 179.97438 * 21 20 19 41 41 H 1.08995 * 113.61677 * 156.34169 * 23 12 11 42 42 H 1.08999 * 113.61392 * 25.43345 * 23 12 11 43 43 H 1.08002 * 119.99759 * 179.71814 * 24 7 6 44 44 H 1.07994 * 120.00574 * 180.25198 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0502 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 1.6845 -2.0602 1.3985 6 6 2.1457 -2.7119 2.5270 7 6 2.8544 -2.0141 3.4871 8 6 3.3576 -2.7248 4.7170 9 6 4.7385 -3.2675 4.4539 10 8 5.2625 -3.0947 3.3738 11 7 5.3916 -3.9451 5.4189 12 6 6.7343 -4.4721 5.1631 13 1 7.2561 -3.9353 4.3710 14 6 7.5751 -4.6604 6.4369 15 6 6.9788 -6.0750 6.5270 16 1 6.0475 -6.1212 7.0913 17 6 7.9891 -7.1395 6.9597 18 7 7.3032 -8.4227 7.1308 19 6 7.6161 -9.5886 6.5393 20 7 6.7662 -10.4939 6.9515 21 6 5.9003 -9.9463 7.8034 22 7 6.1850 -8.6780 7.9413 23 6 6.7759 -6.0012 5.0044 24 6 3.0970 -0.6633 3.3214 25 6 2.6395 -0.0125 2.1909 26 1 -0.3933 0.4418 0.7650 27 1 1.7923 -0.5139 -0.8899 28 1 3.5348 1.7700 0.0321 29 1 1.5617 2.4678 -1.2085 30 1 1.1315 -2.6055 0.6481 31 1 1.9526 -3.7663 2.6584 32 1 2.6849 -3.5465 4.9626 33 1 3.3955 -2.0244 5.5514 34 1 4.9728 -4.0830 6.2828 35 1 7.2766 -4.0078 7.2574 36 1 8.6499 -4.6503 6.2561 37 1 8.4470 -6.8436 7.9035 38 1 8.7612 -7.2391 6.1968 39 1 8.4270 -9.7497 5.8444 40 1 5.0913 -10.4651 8.2960 41 1 7.6322 -6.3576 4.4320 42 1 5.8323 -6.4311 4.6684 43 1 3.6467 -0.1172 4.0736 44 1 2.8325 1.0419 2.0594 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_12335836.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:09 Heat of formation + Delta-G solvation = 80.058986 kcal Electronic energy + Delta-G solvation = -26564.526321 eV Core-core repulsion = 22679.311735 eV Total energy + Delta-G solvation = -3885.214586 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.153 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -43.01821 -41.53077 -40.61417 -39.43607 -37.58765 -35.47972 -34.22461 -33.69165 -32.15127 -31.92875 -30.05614 -28.95436 -26.98774 -25.92000 -24.57838 -23.80161 -23.00098 -22.63726 -22.32375 -21.43300 -20.36169 -18.60251 -18.39359 -18.09731 -17.43447 -17.00088 -16.92523 -16.56445 -16.30878 -16.06921 -15.99661 -15.76595 -15.54657 -15.22840 -15.05810 -14.81012 -14.65239 -14.47506 -14.13744 -13.96422 -13.75674 -13.46686 -13.24259 -13.16414 -12.95416 -12.78924 -12.34100 -12.19206 -11.94383 -11.89030 -11.67964 -11.63355 -10.96547 -10.93848 -10.74969 -10.59755 -10.39683 -10.16553 -9.84853 -9.61112 -5.01446 0.25165 0.48096 0.65743 1.28231 1.32769 1.56753 1.67634 1.98895 2.01084 2.03608 2.77838 3.14139 3.22992 3.26499 3.38622 3.47120 3.55379 3.58333 3.74239 3.75118 3.84033 3.88758 3.92217 3.99505 4.02893 4.20909 4.21641 4.34210 4.35544 4.43523 4.45445 4.46920 4.54592 4.64815 4.69574 4.77556 4.80135 4.95162 5.00859 5.08326 5.26115 5.38511 5.43263 5.46409 5.56370 5.59147 5.79668 6.01150 6.36557 6.59778 7.12337 7.15371 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.069 4.069 3 Si 0.686 3.314 4 C -0.118 4.118 5 C -0.090 4.090 6 C -0.104 4.104 7 C -0.063 4.063 8 C -0.103 4.103 9 C 0.517 3.483 10 O -0.525 6.525 11 N -0.717 5.717 12 C 0.123 3.877 13 H 0.106 0.894 14 C -0.137 4.137 15 C -0.124 4.124 16 H 0.105 0.895 17 C 0.138 3.862 18 N -0.377 5.377 19 C 0.253 3.747 20 N -0.547 5.547 21 C 0.199 3.801 22 N -0.319 5.319 23 C -0.148 4.148 24 C -0.100 4.100 25 C -0.114 4.114 26 H 0.379 0.621 27 H 0.113 0.887 28 H -0.258 1.258 29 H -0.255 1.255 30 H 0.125 0.875 31 H 0.122 0.878 32 H 0.105 0.895 33 H 0.106 0.894 34 H 0.402 0.598 35 H 0.080 0.920 36 H 0.101 0.899 37 H 0.092 0.908 38 H 0.104 0.896 39 H 0.218 0.782 40 H 0.217 0.783 41 H 0.093 0.907 42 H 0.072 0.928 43 H 0.125 0.875 44 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.400 2.241 5.227 5.857 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.179 4.179 3 Si 0.588 3.412 4 C -0.119 4.119 5 C -0.109 4.109 6 C -0.122 4.122 7 C -0.064 4.064 8 C -0.143 4.143 9 C 0.304 3.696 10 O -0.400 6.400 11 N -0.369 5.369 12 C 0.017 3.983 13 H 0.124 0.876 14 C -0.175 4.175 15 C -0.143 4.143 16 H 0.123 0.877 17 C 0.016 3.984 18 N -0.168 5.168 19 C -0.043 4.043 20 N -0.274 5.274 21 C -0.104 4.104 22 N -0.147 5.147 23 C -0.186 4.186 24 C -0.118 4.118 25 C -0.131 4.131 26 H 0.226 0.774 27 H 0.130 0.870 28 H -0.183 1.183 29 H -0.180 1.180 30 H 0.143 0.857 31 H 0.140 0.860 32 H 0.123 0.877 33 H 0.125 0.875 34 H 0.237 0.763 35 H 0.099 0.901 36 H 0.119 0.881 37 H 0.110 0.890 38 H 0.122 0.878 39 H 0.234 0.766 40 H 0.233 0.767 41 H 0.111 0.889 42 H 0.090 0.910 43 H 0.143 0.857 44 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 1.999 2.891 3.794 5.171 hybrid contribution 0.193 -0.842 0.215 0.890 sum 2.191 2.049 4.009 5.007 Atomic orbital electron populations 1.86509 1.17111 1.81706 1.49207 1.25057 0.85191 1.10115 0.97573 0.94829 0.81173 0.78071 0.87093 1.20322 0.99758 0.95080 0.96719 1.20963 0.98702 0.93760 0.97432 1.21019 0.97769 0.99605 0.93772 1.19251 0.98055 0.93759 0.95334 1.20690 0.93965 1.01702 0.97948 1.20615 0.87413 0.77487 0.84121 1.90764 1.68188 1.57049 1.23953 1.45698 1.17347 1.57015 1.16831 1.21741 0.83497 0.94410 0.98643 0.87557 1.23347 1.00698 0.95412 0.98063 1.22976 0.99757 0.94023 0.97515 0.87660 1.21925 0.93919 0.79212 1.03368 1.50563 1.23049 1.09941 1.33240 1.26113 0.99217 0.81705 0.97315 1.70575 1.07497 1.32800 1.16516 1.26053 0.99154 0.89052 0.96175 1.78005 1.02489 1.18161 1.16058 1.23538 1.03244 0.96641 0.95214 1.20906 0.99199 0.93928 0.97759 1.20920 0.98804 0.99142 0.94238 0.77429 0.86990 1.18276 1.18007 0.85666 0.86039 0.87657 0.87535 0.76333 0.90084 0.88108 0.88964 0.87781 0.76607 0.76695 0.88864 0.90967 0.85749 0.85594 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.54 12.83 -35.23 -0.45 -0.99 16 2 C -0.07 -0.06 2.80 36.01 0.10 0.04 16 3 Si 0.69 -0.10 29.80 -169.99 -5.07 -5.16 16 4 C -0.12 -0.16 5.35 -104.62 -0.56 -0.72 16 5 C -0.09 -0.17 9.69 -39.58 -0.38 -0.55 16 6 C -0.10 -0.14 9.70 -39.58 -0.38 -0.53 16 7 C -0.06 -0.05 4.37 -104.62 -0.46 -0.50 16 8 C -0.10 0.20 5.83 -29.04 -0.17 0.03 16 9 C 0.52 0.28 7.82 -10.98 -0.09 0.19 16 10 O -0.52 -2.71 15.63 5.55 0.09 -2.62 16 11 N -0.72 1.46 5.26 -53.02 -0.28 1.18 16 12 C 0.12 -0.24 4.32 -67.12 -0.29 -0.53 16 13 H 0.11 0.00 7.46 -51.93 -0.39 -0.39 16 14 C -0.14 0.59 7.39 -25.92 -0.19 0.40 16 15 C -0.12 0.42 3.75 -89.81 -0.34 0.08 16 16 H 0.11 -0.19 7.99 -51.93 -0.42 -0.61 16 17 C 0.14 -0.50 6.39 -4.04 -0.03 -0.53 16 18 N -0.38 0.12 3.69 -62.63 -0.23 -0.11 16 19 C 0.25 -0.06 12.63 -90.65 -1.14 -1.21 16 20 N -0.55 -1.45 11.19 -15.83 -0.18 -1.63 16 21 C 0.20 0.37 13.03 -91.81 -1.20 -0.83 16 22 N -0.32 -0.67 12.44 29.29 0.36 -0.30 16 23 C -0.15 0.34 7.43 -25.92 -0.19 0.15 16 24 C -0.10 -0.06 9.70 -39.59 -0.38 -0.44 16 25 C -0.11 -0.07 8.67 -39.58 -0.34 -0.42 16 26 H 0.38 -1.14 8.70 45.56 0.40 -0.74 16 27 H 0.11 0.17 7.96 -51.93 -0.41 -0.24 16 28 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 29 H -0.25 -0.76 7.11 56.52 0.40 -0.36 16 30 H 0.13 0.17 8.06 -52.49 -0.42 -0.25 16 31 H 0.12 0.01 8.06 -52.49 -0.42 -0.42 16 32 H 0.11 -0.39 8.09 -51.93 -0.42 -0.81 16 33 H 0.11 -0.45 8.08 -51.93 -0.42 -0.87 16 34 H 0.40 -1.77 8.70 -40.82 -0.36 -2.12 16 35 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 36 H 0.10 -0.55 8.10 -51.93 -0.42 -0.97 16 37 H 0.09 -0.37 8.14 -51.93 -0.42 -0.79 16 38 H 0.10 -0.64 7.79 -51.93 -0.40 -1.04 16 39 H 0.22 -0.97 8.06 -52.49 -0.42 -1.40 16 40 H 0.22 -0.26 8.06 -52.49 -0.42 -0.68 16 41 H 0.09 -0.30 7.90 -51.93 -0.41 -0.71 16 42 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 43 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 44 H 0.13 -0.17 4.91 -52.49 -0.26 -0.43 16 LS Contribution 374.35 15.07 5.64 5.64 Total: 0.00 -12.01 374.35 -12.25 -24.25 By element: Atomic # 1 Polarization: -8.80 SS G_CDS: -6.09 Total: -14.88 kcal Atomic # 6 Polarization: 0.67 SS G_CDS: -6.04 Total: -5.38 kcal Atomic # 7 Polarization: -0.54 SS G_CDS: -0.32 Total: -0.86 kcal Atomic # 8 Polarization: -3.25 SS G_CDS: -0.37 Total: -3.61 kcal Atomic # 14 Polarization: -0.10 SS G_CDS: -5.07 Total: -5.16 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -12.01 -12.25 -24.25 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_12335836.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 104.311 kcal (2) G-P(sol) polarization free energy of solvation -12.007 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.304 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.245 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.252 kcal (6) G-S(sol) free energy of system = (1) + (5) 80.059 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds