Wall clock time and date at job start Tue Mar 9 2021 12:54:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35986 * 117.00276 * 2 1 4 4 C 1.38555 * 120.06881 * 0.32819 * 3 2 1 5 5 C 1.38276 * 120.02074 * 180.24790 * 4 3 2 6 6 C 1.50703 * 119.92271 * 179.72126 * 5 4 3 7 7 O 1.42896 * 109.47055 * 299.72750 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 179.72642 * 6 5 4 9 9 C 1.38208 * 120.15614 * 359.44779 * 5 4 3 10 10 C 1.38387 * 120.12949 * 0.25434 * 9 5 4 11 11 Cl 1.73600 * 120.00746 * 180.02562 * 10 9 5 12 12 C 1.38617 * 119.97644 * 0.02562 * 10 9 5 13 13 O 1.36024 * 120.07221 * 180.02562 * 12 10 9 14 14 C 1.42901 * 116.99804 * 90.00746 * 13 12 10 15 15 C 1.53000 * 109.47401 * 89.99858 * 14 13 12 16 16 C 1.50705 * 109.47009 * 209.99729 * 14 13 12 17 17 O 1.21283 * 119.99909 * 0.02562 * 16 14 13 18 18 N 1.34777 * 120.00200 * 179.97438 * 16 14 13 19 19 C 1.46500 * 119.99756 * 180.02562 * 18 16 14 20 20 H 1.08997 * 112.85090 * 336.19417 * 19 18 16 21 21 C 1.53785 * 113.61303 * 107.50789 * 19 18 16 22 22 C 1.53776 * 87.08312 * 89.11160 * 21 19 18 23 23 H 1.09005 * 113.61849 * 270.88445 * 22 21 19 24 24 C 1.52997 * 113.61632 * 139.97804 * 22 21 19 25 25 N 1.46503 * 109.46832 * 87.50189 * 24 22 21 26 26 C 1.34433 * 126.81957 * 125.00466 * 25 24 22 27 27 N 1.30834 * 108.07405 * 179.97438 * 26 25 24 28 28 C 1.33239 * 109.82841 * 359.97438 * 27 26 25 29 29 N 1.30709 * 108.94956 * 359.75145 * 28 27 26 30 30 C 1.53779 * 113.61192 * 204.99896 * 19 18 16 31 31 H 1.09009 * 109.46381 * 299.99526 * 1 2 3 32 32 H 1.08996 * 109.47054 * 59.99311 * 1 2 3 33 33 H 1.08993 * 109.47283 * 180.02562 * 1 2 3 34 34 H 1.08003 * 119.98956 * 359.96282 * 4 3 2 35 35 H 1.09002 * 109.47152 * 59.72558 * 6 5 4 36 36 H 0.96703 * 114.00193 * 180.02562 * 7 6 5 37 37 H 1.48501 * 109.99997 * 298.67752 * 8 6 5 38 38 H 1.48495 * 110.00011 * 60.00027 * 8 6 5 39 39 H 1.07994 * 119.93878 * 180.27121 * 9 5 4 40 40 H 1.08994 * 109.46964 * 329.99181 * 14 13 12 41 41 H 1.08997 * 109.46934 * 179.97438 * 15 14 13 42 42 H 1.08994 * 109.46987 * 299.99871 * 15 14 13 43 43 H 1.08999 * 109.47164 * 59.99713 * 15 14 13 44 44 H 0.97000 * 119.99705 * 0.02562 * 18 16 14 45 45 H 1.08995 * 113.61045 * 203.66339 * 21 19 18 46 46 H 1.08997 * 113.61051 * 334.56192 * 21 19 18 47 47 H 1.09002 * 109.47689 * 207.50364 * 24 22 21 48 48 H 1.08996 * 109.47310 * 327.50864 * 24 22 21 49 49 H 1.07995 * 125.96164 * 359.97438 * 26 25 24 50 50 H 1.08005 * 125.51997 * 180.02562 * 28 27 26 51 51 H 1.09013 * 113.61422 * 25.43814 * 30 19 18 52 52 H 1.08997 * 113.61635 * 156.24925 * 30 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2933 2.3746 0.0069 5 6 1.9221 3.6061 0.0017 6 6 1.1007 4.8696 0.0028 7 8 0.2759 4.9025 -1.1636 8 14 2.2350 6.3475 0.0033 9 6 3.3022 3.6810 0.0012 10 6 4.0607 2.5235 0.0005 11 17 5.7939 2.6213 0.0005 12 6 3.4360 1.2861 -0.0001 13 8 4.1796 0.1471 -0.0002 14 6 4.5336 -0.3966 1.2730 15 6 3.4521 -1.3793 1.7265 16 6 5.8526 -1.1173 1.1623 17 8 6.4325 -1.1605 0.0980 18 7 6.3882 -1.7128 2.2462 19 6 7.6706 -2.4128 2.1387 20 1 7.8888 -2.7429 1.1230 21 6 8.8368 -1.6688 2.8106 22 6 8.4723 -2.4235 4.0998 23 1 7.7372 -1.9056 4.7161 24 6 9.6888 -2.8985 4.8968 25 7 10.1206 -1.8360 5.8084 26 6 10.2805 -1.9323 7.1397 27 7 10.6764 -0.7680 7.5862 28 6 10.7807 0.0925 6.5743 29 7 10.4562 -0.5164 5.4642 30 6 7.8640 -3.5105 3.1981 31 1 -0.3632 0.5138 0.8901 32 1 -0.3633 0.5139 -0.8899 33 1 -0.3633 -1.0276 0.0005 34 1 0.2147 2.3192 0.0116 35 1 0.4722 4.8936 0.8931 36 1 -0.2813 5.6901 -1.2292 37 1 3.0759 6.3420 1.2273 38 1 3.0972 6.3265 -1.2055 39 1 3.7896 4.6446 0.0015 40 1 4.6203 0.4099 2.0010 41 1 3.7225 -1.7943 2.6975 42 1 2.4982 -0.8581 1.8066 43 1 3.3655 -2.1858 0.9984 44 1 5.9246 -1.6779 3.0975 45 1 9.8143 -1.9364 2.4095 46 1 8.6863 -0.5913 2.8779 47 1 9.4227 -3.7851 5.4724 48 1 10.5006 -3.1407 4.2109 49 1 10.1117 -2.8164 7.7364 50 1 11.0881 1.1246 6.6574 51 1 6.9280 -3.9200 3.5784 52 1 8.5744 -4.2825 2.9024 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688106_13428712.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:00 Heat of formation + Delta-G solvation = 16.710856 kcal Electronic energy + Delta-G solvation = -38765.379239 eV Core-core repulsion = 33569.178257 eV Total energy + Delta-G solvation = -5196.200981 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 423.144 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -42.99232 -42.13304 -41.42056 -40.01460 -39.28850 -38.84337 -37.92843 -37.04818 -35.52212 -34.33047 -32.92941 -32.17018 -31.57801 -31.49468 -29.06049 -28.60658 -26.79794 -26.74335 -25.79250 -24.42443 -23.77732 -22.87505 -22.84176 -22.42022 -21.93409 -20.43810 -19.72894 -18.81125 -18.71688 -18.39231 -18.21670 -18.02250 -17.42634 -16.92394 -16.91404 -16.78462 -16.34780 -16.29919 -16.06455 -15.89156 -15.73693 -15.45348 -15.27703 -15.11264 -14.86583 -14.64203 -14.60549 -14.32548 -14.26231 -14.05315 -13.92439 -13.52816 -13.45073 -13.26202 -13.15231 -13.03339 -12.88684 -12.85888 -12.65714 -12.53376 -12.33955 -12.22278 -12.10916 -11.88971 -11.76805 -11.51403 -11.30343 -10.98586 -10.86527 -10.80397 -10.57353 -10.42712 -10.20451 -9.98137 -9.55216 -5.01431 -0.48807 -0.21450 0.65243 0.70283 1.21645 1.35185 1.45415 1.51460 1.59510 1.93649 2.00061 2.02850 2.09704 2.54291 3.16520 3.27874 3.41848 3.45430 3.51880 3.52556 3.60263 3.62159 3.66411 3.67007 3.73991 3.87406 3.89913 3.95057 4.00014 4.10759 4.20281 4.21844 4.34072 4.39897 4.41390 4.47821 4.56911 4.57532 4.62199 4.65059 4.66942 4.71052 4.72801 4.80056 4.93982 4.94654 4.99853 5.06294 5.09599 5.12251 5.31150 5.44371 5.49310 5.80808 5.95238 6.20174 6.36062 6.87240 7.03978 7.12972 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.309 6.309 3 C 0.134 3.866 4 C -0.158 4.158 5 C -0.030 4.030 6 C -0.069 4.069 7 O -0.559 6.559 8 Si 0.763 3.237 9 C -0.158 4.158 10 C -0.025 4.025 11 Cl -0.053 7.053 12 C 0.053 3.947 13 O -0.306 6.306 14 C 0.071 3.929 15 C -0.159 4.159 16 C 0.518 3.482 17 O -0.560 6.560 18 N -0.694 5.694 19 C 0.108 3.892 20 H 0.083 0.917 21 C -0.140 4.140 22 C -0.108 4.108 23 H 0.091 0.909 24 C 0.130 3.870 25 N -0.378 5.378 26 C 0.257 3.743 27 N -0.585 5.585 28 C 0.182 3.818 29 N -0.346 5.346 30 C -0.111 4.111 31 H 0.078 0.922 32 H 0.065 0.935 33 H 0.122 0.878 34 H 0.174 0.826 35 H 0.117 0.883 36 H 0.409 0.591 37 H -0.285 1.285 38 H -0.302 1.302 39 H 0.130 0.870 40 H 0.096 0.904 41 H 0.101 0.899 42 H 0.081 0.919 43 H 0.063 0.937 44 H 0.415 0.585 45 H 0.090 0.910 46 H 0.044 0.956 47 H 0.147 0.853 48 H 0.094 0.906 49 H 0.260 0.740 50 H 0.227 0.773 51 H 0.099 0.901 52 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.068 -2.541 7.370 12.734 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.221 6.221 3 C 0.087 3.913 4 C -0.176 4.176 5 C -0.031 4.031 6 C -0.180 4.180 7 O -0.370 6.370 8 Si 0.670 3.330 9 C -0.177 4.177 10 C -0.052 4.052 11 Cl -0.024 7.024 12 C 0.007 3.993 13 O -0.222 6.222 14 C 0.013 3.987 15 C -0.216 4.216 16 C 0.304 3.696 17 O -0.437 6.437 18 N -0.348 5.348 19 C 0.003 3.997 20 H 0.101 0.899 21 C -0.179 4.179 22 C -0.128 4.128 23 H 0.110 0.890 24 C 0.010 3.990 25 N -0.168 5.168 26 C -0.039 4.039 27 N -0.313 5.313 28 C -0.120 4.120 29 N -0.174 5.174 30 C -0.149 4.149 31 H 0.096 0.904 32 H 0.084 0.916 33 H 0.140 0.860 34 H 0.191 0.809 35 H 0.134 0.866 36 H 0.261 0.739 37 H -0.212 1.212 38 H -0.230 1.230 39 H 0.148 0.852 40 H 0.114 0.886 41 H 0.120 0.880 42 H 0.100 0.900 43 H 0.082 0.918 44 H 0.253 0.747 45 H 0.108 0.892 46 H 0.063 0.937 47 H 0.164 0.836 48 H 0.113 0.887 49 H 0.276 0.724 50 H 0.243 0.757 51 H 0.118 0.882 52 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -8.209 -2.811 5.916 10.502 hybrid contribution 0.338 0.022 0.174 0.381 sum -7.871 -2.789 6.090 10.335 Atomic orbital electron populations 1.23533 0.75616 1.06233 1.02929 1.86219 1.23845 1.24588 1.87481 1.19179 0.90185 0.86441 0.95512 1.21376 1.02137 0.89538 1.04590 1.19480 0.91520 0.95804 0.96297 1.24646 1.00231 1.00283 0.92806 1.86432 1.59058 1.49737 1.41731 0.94555 0.79282 0.82668 0.76503 1.20710 0.93954 0.96459 1.06569 1.21060 0.85754 0.93853 1.04557 1.98408 1.08828 1.98501 1.96646 1.17713 0.87607 0.85069 1.08888 1.86250 1.69944 1.37792 1.28224 1.22369 0.93255 0.97480 0.85630 1.22248 0.97925 0.98806 1.02651 1.20553 0.86238 0.78711 0.84083 1.90738 1.63246 1.60027 1.29721 1.45423 1.22557 1.54955 1.11876 1.21950 0.82844 0.94378 1.00554 0.89863 1.23405 0.98680 0.99204 0.96582 1.22768 0.96929 0.98186 0.94878 0.89031 1.22265 0.97000 0.86884 0.92839 1.50777 1.49161 1.09039 1.07871 1.26924 0.94415 0.99098 0.83475 1.70542 1.25086 1.01911 1.33742 1.26401 0.98526 1.01822 0.85282 1.78032 1.23485 0.91392 1.24501 1.23274 1.03106 0.95472 0.93032 0.90360 0.91638 0.85953 0.80915 0.86589 0.73920 1.21233 1.23020 0.85228 0.88649 0.87995 0.89971 0.91805 0.74743 0.89155 0.93728 0.83562 0.88744 0.72404 0.75689 0.88242 0.86141 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.31 -0.89 8.18 -79.52 -0.65 -1.54 16 3 C 0.13 0.75 6.54 22.56 0.15 0.90 16 4 C -0.16 -0.30 8.60 22.35 0.19 -0.10 16 5 C -0.03 -0.11 5.42 -19.86 -0.11 -0.22 16 6 C -0.07 0.24 2.81 71.24 0.20 0.44 16 7 O -0.56 2.05 12.75 -148.98 -1.90 0.16 16 8 Si 0.76 -1.75 29.78 68.60 2.04 0.29 16 9 C -0.16 -1.29 8.45 22.30 0.19 -1.10 16 10 C -0.02 -0.28 6.33 22.40 0.14 -0.14 16 11 Cl -0.05 -0.71 28.50 -2.72 -0.08 -0.79 16 12 C 0.05 0.56 5.56 22.58 0.13 0.68 16 13 O -0.31 -4.00 8.48 -67.41 -0.57 -4.57 16 14 C 0.07 0.42 3.20 29.85 0.10 0.51 16 15 C -0.16 0.12 8.99 71.98 0.65 0.77 16 16 C 0.52 4.57 7.23 87.66 0.63 5.20 16 17 O -0.56 -10.80 16.10 16.00 0.26 -10.54 16 18 N -0.69 -0.25 5.16 -440.03 -2.27 -2.52 16 19 C 0.11 -0.03 4.32 45.52 0.20 0.17 16 20 H 0.08 0.43 7.46 -2.39 -0.02 0.41 16 21 C -0.14 -0.08 7.43 31.12 0.23 0.15 16 22 C -0.11 0.71 3.73 -10.27 -0.04 0.67 16 23 H 0.09 -0.48 8.14 -2.38 -0.02 -0.50 16 24 C 0.13 -1.09 6.39 86.38 0.55 -0.54 16 25 N -0.38 0.24 3.69 -352.06 -1.30 -1.06 16 26 C 0.26 -0.41 12.63 180.36 2.28 1.86 16 27 N -0.58 -3.46 11.19 -204.00 -2.28 -5.74 16 28 C 0.18 1.10 13.03 180.77 2.36 3.46 16 29 N -0.35 -2.29 12.58 -61.25 -0.77 -3.06 16 30 C -0.11 1.02 7.39 31.12 0.23 1.25 16 31 H 0.08 -0.74 7.65 -2.38 -0.02 -0.76 16 32 H 0.06 -0.40 7.68 -2.39 -0.02 -0.42 16 33 H 0.12 -1.10 8.14 -2.39 -0.02 -1.12 16 34 H 0.17 -0.68 6.30 -2.91 -0.02 -0.70 16 35 H 0.12 -1.12 7.96 -2.39 -0.02 -1.14 16 36 H 0.41 -5.84 8.74 -74.05 -0.65 -6.49 16 37 H -0.29 -0.93 7.11 99.48 0.71 -0.22 16 38 H -0.30 -2.12 7.11 99.48 0.71 -1.42 16 39 H 0.13 1.05 4.86 -2.91 -0.01 1.03 16 40 H 0.10 0.31 7.91 -2.39 -0.02 0.29 16 41 H 0.10 -0.77 7.56 -2.39 -0.02 -0.79 16 42 H 0.08 -0.08 6.28 -2.39 -0.02 -0.09 16 43 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 44 H 0.42 -2.60 8.12 -92.71 -0.75 -3.35 16 45 H 0.09 0.09 7.90 -2.39 -0.02 0.07 16 46 H 0.04 0.31 8.14 -2.39 -0.02 0.29 16 47 H 0.15 -2.40 8.09 -2.39 -0.02 -2.42 16 48 H 0.09 -0.76 7.84 -2.39 -0.02 -0.78 16 49 H 0.26 -3.18 8.06 -2.91 -0.02 -3.20 16 50 H 0.23 0.23 8.06 -2.91 -0.02 0.21 16 51 H 0.10 -1.20 8.14 -2.38 -0.02 -1.22 16 52 H 0.12 -1.47 8.10 -2.39 -0.02 -1.48 16 Total: 0.00 -39.32 447.75 1.30 -38.02 By element: Atomic # 1 Polarization: -23.31 SS G_CDS: -0.36 Total: -23.67 kcal Atomic # 6 Polarization: 5.84 SS G_CDS: 9.18 Total: 15.02 kcal Atomic # 7 Polarization: -5.76 SS G_CDS: -6.62 Total: -12.38 kcal Atomic # 8 Polarization: -13.63 SS G_CDS: -2.86 Total: -16.49 kcal Atomic # 14 Polarization: -1.75 SS G_CDS: 2.04 Total: 0.29 kcal Atomic # 17 Polarization: -0.71 SS G_CDS: -0.08 Total: -0.79 kcal Total: -39.32 1.30 -38.02 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_13428712.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 54.731 kcal (2) G-P(sol) polarization free energy of solvation -39.319 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.412 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.299 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.020 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.711 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds