Wall clock time and date at job start Tue Mar 9 2021 12:54:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.46987 * 2 1 4 4 C 1.50698 * 109.46990 * 240.00455 * 2 1 3 5 5 C 1.32689 * 124.68389 * 299.99425 * 4 2 1 6 6 C 1.44505 * 113.09933 * 180.02562 * 5 4 2 7 7 C 1.47048 * 123.49248 * 179.73063 * 6 5 4 8 8 O 1.21658 * 120.00153 * 180.02562 * 7 6 5 9 9 N 1.34779 * 119.99833 * 0.02562 * 7 6 5 10 10 C 1.46504 * 119.99652 * 179.97438 * 9 7 6 11 11 H 1.09004 * 112.84862 * 336.19335 * 10 9 7 12 12 C 1.53778 * 113.61427 * 107.50599 * 10 9 7 13 13 C 1.53774 * 87.08526 * 89.11371 * 12 10 9 14 14 H 1.09008 * 113.61518 * 270.88811 * 13 12 10 15 15 C 1.52997 * 113.69342 * 139.99104 * 13 12 10 16 16 N 1.46496 * 109.46857 * 87.46622 * 15 13 12 17 17 C 1.34430 * 126.82417 * 125.00420 * 16 15 13 18 18 N 1.30835 * 108.07689 * 179.97438 * 17 16 15 19 19 C 1.33235 * 109.82912 * 359.97438 * 18 17 16 20 20 N 1.30713 * 108.94838 * 359.74968 * 19 18 17 21 21 C 1.53781 * 113.60978 * 205.00133 * 10 9 7 22 22 C 1.36226 * 113.01858 * 0.02562 * 6 5 4 23 23 Cl 1.73592 * 124.60726 * 179.97438 * 22 6 5 24 24 S 1.70448 * 110.78291 * 359.97438 * 22 6 5 25 25 H 0.96704 * 114.00102 * 59.99894 * 1 2 3 26 26 H 1.08991 * 109.47091 * 119.99620 * 2 1 3 27 27 H 1.48507 * 109.99822 * 59.99809 * 3 2 1 28 28 H 1.48495 * 110.00479 * 181.31996 * 3 2 1 29 29 H 1.07998 * 123.45064 * 0.02763 * 5 4 2 30 30 H 0.96990 * 119.99892 * 359.97438 * 9 7 6 31 31 H 1.09001 * 113.61253 * 203.66466 * 12 10 9 32 32 H 1.08997 * 113.61232 * 334.55981 * 12 10 9 33 33 H 1.08999 * 109.46819 * 207.46662 * 15 13 12 34 34 H 1.08996 * 109.47207 * 327.46491 * 15 13 12 35 35 H 1.08000 * 125.95810 * 359.92128 * 17 16 15 36 36 H 1.07998 * 125.52481 * 179.97438 * 19 18 17 37 37 H 1.08998 * 113.61999 * 25.43267 * 21 10 9 38 38 H 1.08997 * 113.61318 * 156.33683 * 21 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.6687 -1.9755 -1.5321 6 6 2.2778 -2.4011 -2.7715 7 6 2.1403 -3.7589 -3.3189 8 8 2.6815 -4.0491 -4.3692 9 7 1.4146 -4.6820 -2.6572 10 6 1.2771 -6.0346 -3.2030 11 1 1.4272 -6.0729 -4.2820 12 6 2.0779 -7.0953 -2.4295 13 6 0.8361 -7.2706 -1.5397 14 1 0.8178 -6.6021 -0.6788 15 6 0.5468 -8.7262 -1.1677 16 7 1.2910 -9.0777 0.0442 17 6 0.7844 -9.5798 1.1836 18 7 1.7719 -9.7569 2.0235 19 6 2.9186 -9.3815 1.4585 20 7 2.6765 -8.9634 0.2440 21 6 0.0074 -6.7628 -2.7315 22 6 2.9980 -1.4159 -3.3769 23 17 3.8531 -1.5993 -4.8764 24 16 2.9452 0.0212 -2.4620 25 1 -0.3933 0.4417 -0.7651 26 1 1.7923 -0.5137 0.8899 27 1 1.5614 2.4679 1.2085 28 1 3.5345 1.7705 -0.0321 29 1 1.0619 -2.6211 -0.9145 30 1 0.9834 -4.4507 -1.8198 31 1 2.3189 -7.9781 -3.0216 32 1 2.9407 -6.6909 -1.9003 33 1 -0.5210 -8.8496 -0.9870 34 1 0.8546 -9.3782 -1.9851 35 1 -0.2562 -9.7981 1.3730 36 1 3.8910 -9.4201 1.9268 37 1 -0.8014 -6.0902 -2.4460 38 1 -0.3177 -7.5548 -3.4061 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688106_13431040.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:05 Heat of formation + Delta-G solvation = 90.345013 kcal Electronic energy + Delta-G solvation = -25923.020343 eV Core-core repulsion = 21923.141865 eV Total energy + Delta-G solvation = -3999.878477 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.054 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -42.98652 -41.46984 -39.97566 -38.83851 -37.89831 -37.01211 -35.45118 -33.83108 -32.12044 -31.73078 -29.29785 -27.05030 -26.88438 -26.18130 -24.28807 -22.89069 -22.43078 -22.37732 -20.95250 -20.40877 -19.48050 -18.38678 -18.07031 -17.80769 -17.09298 -16.85996 -16.54905 -16.24935 -15.99355 -15.90011 -15.78520 -15.38493 -15.25400 -14.89184 -14.76001 -14.42915 -14.35657 -14.14908 -14.10088 -13.61330 -13.16580 -13.04481 -12.92735 -12.56429 -12.44525 -12.36599 -12.09701 -11.95954 -11.79650 -11.42893 -10.92122 -10.89888 -10.72504 -10.71593 -10.60908 -10.14782 -9.94278 -9.72575 -5.32600 -0.63707 -0.24659 0.39158 0.64716 0.69038 1.00749 1.05907 1.31786 1.41870 1.74869 2.06209 2.07001 2.22200 3.09796 3.10804 3.27534 3.35555 3.39861 3.45776 3.61925 3.76794 3.81951 3.85949 3.95565 3.98304 4.18910 4.21605 4.30868 4.39703 4.50331 4.56263 4.62629 4.70166 4.82302 4.86037 4.99498 5.02282 5.30106 5.48959 5.50064 5.82324 6.28026 6.38679 7.15456 7.16187 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.025 4.025 3 Si 0.650 3.350 4 C -0.236 4.236 5 C -0.071 4.071 6 C -0.160 4.160 7 C 0.579 3.421 8 O -0.515 6.515 9 N -0.707 5.707 10 C 0.121 3.879 11 H 0.109 0.891 12 C -0.134 4.134 13 C -0.123 4.123 14 H 0.094 0.906 15 C 0.137 3.863 16 N -0.378 5.378 17 C 0.251 3.749 18 N -0.547 5.547 19 C 0.196 3.804 20 N -0.312 5.312 21 C -0.136 4.136 22 C -0.114 4.114 23 Cl 0.028 6.972 24 S 0.239 5.761 25 H 0.383 0.617 26 H 0.128 0.872 27 H -0.228 1.228 28 H -0.233 1.233 29 H 0.156 0.844 30 H 0.400 0.600 31 H 0.093 0.907 32 H 0.076 0.924 33 H 0.104 0.896 34 H 0.093 0.907 35 H 0.218 0.782 36 H 0.216 0.784 37 H 0.080 0.920 38 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.518 2.540 0.206 6.078 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.138 4.138 3 Si 0.548 3.452 4 C -0.353 4.353 5 C -0.100 4.100 6 C -0.179 4.179 7 C 0.365 3.635 8 O -0.391 6.391 9 N -0.359 5.359 10 C 0.016 3.984 11 H 0.127 0.873 12 C -0.173 4.173 13 C -0.142 4.142 14 H 0.113 0.887 15 C 0.015 3.985 16 N -0.169 5.169 17 C -0.046 4.046 18 N -0.274 5.274 19 C -0.107 4.107 20 N -0.139 5.139 21 C -0.175 4.175 22 C -0.261 4.261 23 Cl 0.057 6.943 24 S 0.504 5.496 25 H 0.231 0.769 26 H 0.145 0.855 27 H -0.150 1.150 28 H -0.157 1.157 29 H 0.173 0.827 30 H 0.235 0.765 31 H 0.112 0.888 32 H 0.095 0.905 33 H 0.123 0.877 34 H 0.111 0.889 35 H 0.234 0.766 36 H 0.232 0.768 37 H 0.098 0.902 38 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -3.360 4.187 -0.152 5.371 hybrid contribution -0.910 -2.070 0.595 2.338 sum -4.270 2.116 0.443 4.786 Atomic orbital electron populations 1.86537 1.16325 1.81639 1.49294 1.24435 0.85370 1.09199 0.94817 0.95072 0.82426 0.77357 0.90297 1.24806 1.07921 0.99297 1.03275 1.20973 0.99358 0.95015 0.94646 1.20200 1.04711 0.95416 0.97565 1.17381 0.78714 0.83383 0.84035 1.90885 1.45996 1.80214 1.21981 1.45463 1.53247 1.10904 1.26291 1.21826 0.96196 0.80784 0.99641 0.87323 1.23414 0.97137 0.99180 0.97575 1.22907 0.98427 0.94875 0.97976 0.88750 1.21921 0.95330 0.96711 0.84512 1.50600 1.05538 1.47442 1.13361 1.26127 1.00805 0.94904 0.82758 1.70562 0.98499 1.25765 1.32581 1.26067 0.98703 0.96498 0.89467 1.78099 0.91161 1.25328 1.19336 1.23358 0.96742 1.00375 0.97035 1.25534 1.02785 1.00921 0.96821 1.98444 1.73154 1.97050 1.25654 1.83343 1.46653 1.08569 1.11071 0.76949 0.85525 1.15048 1.15724 0.82683 0.76538 0.88807 0.90545 0.87747 0.88908 0.76590 0.76784 0.90157 0.87955 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.17 12.85 -35.23 -0.45 0.72 16 2 C -0.02 0.06 2.95 36.00 0.11 0.17 16 3 Si 0.65 -1.69 30.90 -169.99 -5.25 -6.94 16 4 C -0.24 0.39 5.68 -36.20 -0.21 0.18 16 5 C -0.07 0.08 9.71 -39.00 -0.38 -0.30 16 6 C -0.16 -0.20 5.98 -104.58 -0.63 -0.82 16 7 C 0.58 1.44 7.79 -12.69 -0.10 1.34 16 8 O -0.51 -3.03 14.51 5.23 0.08 -2.95 16 9 N -0.71 0.43 5.24 -54.20 -0.28 0.15 16 10 C 0.12 -0.14 4.32 -67.12 -0.29 -0.43 16 11 H 0.11 0.06 7.46 -51.93 -0.39 -0.33 16 12 C -0.13 0.12 7.43 -25.92 -0.19 -0.07 16 13 C -0.12 0.37 3.73 -89.81 -0.33 0.04 16 14 H 0.09 -0.20 8.14 -51.92 -0.42 -0.63 16 15 C 0.14 -0.47 6.39 -4.05 -0.03 -0.49 16 16 N -0.38 0.03 3.69 -62.63 -0.23 -0.20 16 17 C 0.25 -0.05 12.63 -90.65 -1.14 -1.20 16 18 N -0.55 -1.55 11.19 -15.83 -0.18 -1.73 16 19 C 0.20 0.45 13.03 -91.82 -1.20 -0.75 16 20 N -0.31 -0.81 12.58 29.29 0.37 -0.44 16 21 C -0.14 0.55 7.39 -25.92 -0.19 0.36 16 22 C -0.11 -0.19 6.87 30.01 0.21 0.02 16 23 Cl 0.03 0.09 27.20 -51.86 -1.41 -1.32 16 24 S 0.24 -0.25 20.17 -107.50 -2.17 -2.42 16 25 H 0.38 -2.23 8.70 45.56 0.40 -1.84 16 26 H 0.13 -0.30 7.96 -51.93 -0.41 -0.72 16 27 H -0.23 -0.04 7.11 56.52 0.40 0.37 16 28 H -0.23 0.12 7.11 56.52 0.40 0.52 16 29 H 0.16 -0.47 7.10 -52.49 -0.37 -0.85 16 30 H 0.40 -1.12 7.24 -40.82 -0.30 -1.42 16 31 H 0.09 -0.09 7.90 -51.93 -0.41 -0.50 16 32 H 0.08 0.12 8.14 -51.93 -0.42 -0.30 16 33 H 0.10 -0.65 8.09 -51.93 -0.42 -1.07 16 34 H 0.09 -0.33 7.85 -51.93 -0.41 -0.74 16 35 H 0.22 -1.00 8.06 -52.49 -0.42 -1.43 16 36 H 0.22 -0.12 8.06 -52.49 -0.42 -0.55 16 37 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 38 H 0.10 -0.52 8.10 -51.93 -0.42 -0.94 16 LS Contribution 357.38 15.07 5.39 5.39 Total: 0.00 -10.35 357.38 -12.56 -22.91 By element: Atomic # 1 Polarization: -7.16 SS G_CDS: -4.04 Total: -11.20 kcal Atomic # 6 Polarization: 2.42 SS G_CDS: -4.37 Total: -1.95 kcal Atomic # 7 Polarization: -1.90 SS G_CDS: -0.32 Total: -2.22 kcal Atomic # 8 Polarization: -1.86 SS G_CDS: -0.38 Total: -2.23 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: -5.25 Total: -6.94 kcal Atomic # 16 Polarization: -0.25 SS G_CDS: -2.17 Total: -2.42 kcal Atomic # 17 Polarization: 0.09 SS G_CDS: -1.41 Total: -1.32 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -10.35 -12.56 -22.91 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688106_13431040.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 113.256 kcal (2) G-P(sol) polarization free energy of solvation -10.348 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 102.908 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.563 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.911 kcal (6) G-S(sol) free energy of system = (1) + (5) 90.345 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds