Wall clock time and date at job start Tue Mar 9 2021 12:56:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.35540 * 125.67879 * 2 1 4 4 C 1.35447 * 108.87110 * 180.21203 * 3 2 1 5 5 C 1.50701 * 126.06531 * 179.72260 * 4 3 2 6 6 O 1.42895 * 109.47245 * 245.02026 * 5 4 3 7 7 Si 1.86294 * 109.47269 * 5.02686 * 5 4 3 8 8 C 1.39834 * 107.86675 * 359.61679 * 4 3 2 9 9 C 1.37656 * 125.67836 * 179.97438 * 2 1 3 10 10 C 1.46675 * 126.23171 * 359.97438 * 9 2 1 11 11 O 1.21697 * 120.00036 * 5.67298 * 10 9 2 12 12 N 1.34773 * 119.99803 * 185.68168 * 10 9 2 13 13 C 1.46507 * 119.99987 * 185.19853 * 12 10 9 14 14 H 1.08996 * 112.84741 * 23.80562 * 13 12 10 15 15 C 1.53782 * 113.61210 * 154.99629 * 13 12 10 16 16 C 1.53784 * 87.07947 * 89.11922 * 15 13 12 17 17 H 1.08998 * 113.61152 * 270.79816 * 16 15 13 18 18 C 1.52998 * 113.61189 * 139.97956 * 16 15 13 19 19 N 1.46504 * 109.46797 * 175.00016 * 18 16 15 20 20 C 1.36879 * 126.39761 * 89.99873 * 19 18 16 21 21 C 1.34672 * 106.81764 * 179.97438 * 20 19 18 22 22 N 1.34126 * 108.01920 * 0.02562 * 21 20 19 23 23 C 1.30496 * 109.25633 * 359.72270 * 22 21 20 24 24 C 1.53774 * 113.61582 * 252.49265 * 13 12 10 25 25 H 1.08995 * 109.47391 * 85.94165 * 1 2 3 26 26 H 1.09002 * 109.46798 * 205.94728 * 1 2 3 27 27 H 1.09007 * 109.46570 * 325.94184 * 1 2 3 28 28 H 1.08002 * 125.56242 * 359.94597 * 3 2 1 29 29 H 1.09002 * 109.46586 * 125.02893 * 5 4 3 30 30 H 0.96707 * 113.99979 * 60.00611 * 6 5 4 31 31 H 1.48498 * 110.00040 * 58.67563 * 7 5 4 32 32 H 1.48503 * 110.00110 * 179.97438 * 7 5 4 33 33 H 1.08003 * 126.45855 * 180.15337 * 8 4 3 34 34 H 0.96999 * 120.00523 * 5.19649 * 12 10 9 35 35 H 1.09006 * 113.61441 * 203.66690 * 15 13 12 36 36 H 1.09002 * 113.61955 * 334.48479 * 15 13 12 37 37 H 1.09001 * 109.47249 * 294.99691 * 18 16 15 38 38 H 1.09001 * 109.47562 * 55.00325 * 18 16 15 39 39 H 1.08000 * 126.59212 * 0.04005 * 20 19 18 40 40 H 1.08003 * 125.98959 * 180.02562 * 21 20 19 41 41 H 1.08000 * 125.65192 * 180.28830 * 23 22 21 42 42 H 1.09005 * 113.61617 * 25.43932 * 24 13 12 43 43 H 1.09000 * 113.61131 * 156.33241 * 24 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1010 0.0000 4 6 3.5521 0.7093 -0.0047 5 6 4.7536 1.6189 -0.0123 6 8 5.4715 1.4498 -1.2362 7 14 4.1934 3.3891 0.1397 8 6 3.5780 -0.6888 0.0011 9 6 2.2679 -1.1182 0.0005 10 6 1.8124 -2.5124 0.0017 11 8 0.6265 -2.7653 -0.1019 12 7 2.7073 -3.5135 0.1176 13 6 2.2671 -4.9063 0.0046 14 1 1.3410 -5.0129 -0.5602 15 6 3.3782 -5.8688 -0.4468 16 6 3.7236 -6.0430 1.0416 17 1 4.4504 -5.3184 1.4088 18 6 4.0734 -7.4822 1.4252 19 7 4.5007 -7.5240 2.8260 20 6 3.6949 -7.7172 3.9155 21 6 4.4921 -7.6844 5.0004 22 7 5.7502 -7.4762 4.5847 23 6 5.7638 -7.3847 3.2830 24 6 2.2647 -5.6622 1.3437 25 1 -0.3634 0.0727 -1.0250 26 1 -0.3633 -0.9241 0.4497 27 1 -0.3633 0.8515 0.5756 28 1 1.9082 2.1236 -0.0008 29 1 5.4030 1.3700 0.8270 30 1 4.9539 1.6542 -2.0272 31 1 3.4183 3.5707 1.3933 32 1 5.3692 4.2963 0.1341 33 1 4.4584 -1.3144 0.0017 34 1 3.6428 -3.3120 0.2758 35 1 3.0038 -6.7780 -0.9174 36 1 4.1657 -5.3861 -1.0256 37 1 3.1969 -8.1166 1.2937 38 1 4.8813 -7.8419 0.7881 39 1 2.6255 -7.8681 3.9067 40 1 4.1741 -7.8046 6.0255 41 1 6.6397 -7.2222 2.6725 42 1 2.1538 -5.0123 2.2118 43 1 1.5858 -6.5147 1.3626 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_10803934.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:09 Heat of formation + Delta-G solvation = 81.302163 kcal Electronic energy + Delta-G solvation = -25960.702871 eV Core-core repulsion = 22203.768334 eV Total energy + Delta-G solvation = -3756.934537 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.94930 -42.60832 -41.13089 -39.28769 -37.70116 -35.51794 -34.32901 -33.59404 -30.98243 -30.35885 -28.88946 -28.33674 -26.99599 -25.81488 -24.82933 -23.56809 -22.19853 -21.84572 -21.38898 -20.69522 -20.33720 -18.94082 -18.41516 -17.76944 -17.18023 -16.92452 -16.73470 -16.49117 -16.10648 -15.82682 -15.57078 -15.36561 -15.10709 -15.02311 -14.88230 -14.63761 -14.43505 -14.22172 -14.07761 -13.94661 -13.71137 -13.56255 -13.35651 -13.25444 -12.97504 -12.54368 -12.24209 -11.94365 -11.89059 -11.59222 -11.10810 -10.82080 -10.48426 -10.35181 -10.24739 -9.74955 -9.39219 -9.31530 -5.05311 0.37462 1.16848 1.33691 1.45681 1.47197 1.66614 1.81461 1.99581 2.18870 2.27479 2.34661 3.12079 3.22132 3.44761 3.53582 3.55829 3.63218 3.73642 3.82088 3.86037 3.86801 3.95988 4.03059 4.13437 4.21809 4.23060 4.31256 4.43088 4.43433 4.57156 4.57346 4.62441 4.62537 4.71024 4.73096 4.79873 4.84935 4.90843 5.12433 5.34464 5.37815 5.61165 5.84191 5.86913 6.06282 6.27793 6.34030 6.66452 7.06956 7.22311 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.404 5.404 3 C 0.028 3.972 4 C -0.207 4.207 5 C -0.031 4.031 6 O -0.543 6.543 7 Si 0.683 3.317 8 C -0.112 4.112 9 C -0.056 4.056 10 C 0.595 3.405 11 O -0.544 6.544 12 N -0.703 5.703 13 C 0.126 3.874 14 H 0.108 0.892 15 C -0.136 4.136 16 C -0.129 4.129 17 H 0.098 0.902 18 C 0.113 3.887 19 N -0.457 5.457 20 C -0.054 4.054 21 C -0.031 4.031 22 N -0.496 5.496 23 C 0.179 3.821 24 C -0.145 4.145 25 H 0.081 0.919 26 H 0.105 0.895 27 H 0.085 0.915 28 H 0.174 0.826 29 H 0.111 0.889 30 H 0.377 0.623 31 H -0.257 1.257 32 H -0.255 1.255 33 H 0.144 0.856 34 H 0.404 0.596 35 H 0.102 0.898 36 H 0.082 0.918 37 H 0.095 0.905 38 H 0.097 0.903 39 H 0.172 0.828 40 H 0.168 0.832 41 H 0.203 0.797 42 H 0.074 0.926 43 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.738 0.705 -4.965 5.713 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.075 5.075 3 C -0.108 4.108 4 C -0.214 4.214 5 C -0.143 4.143 6 O -0.348 6.348 7 Si 0.585 3.415 8 C -0.138 4.138 9 C -0.169 4.169 10 C 0.384 3.616 11 O -0.423 6.423 12 N -0.354 5.354 13 C 0.020 3.980 14 H 0.126 0.874 15 C -0.175 4.175 16 C -0.148 4.148 17 H 0.116 0.884 18 C -0.009 4.009 19 N -0.140 5.140 20 C -0.187 4.187 21 C -0.179 4.179 22 N -0.213 5.213 23 C -0.103 4.103 24 C -0.184 4.184 25 H 0.100 0.900 26 H 0.123 0.877 27 H 0.104 0.896 28 H 0.191 0.809 29 H 0.128 0.872 30 H 0.224 0.776 31 H -0.182 1.182 32 H -0.180 1.180 33 H 0.162 0.838 34 H 0.240 0.760 35 H 0.121 0.879 36 H 0.100 0.900 37 H 0.113 0.887 38 H 0.115 0.885 39 H 0.189 0.811 40 H 0.185 0.815 41 H 0.219 0.781 42 H 0.093 0.907 43 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -2.863 1.120 -3.797 4.885 hybrid contribution -0.124 -0.452 -0.100 0.479 sum -2.987 0.668 -3.897 4.955 Atomic orbital electron populations 1.22383 0.75476 1.05777 1.04252 1.43816 1.07036 1.04674 1.51999 1.21877 0.90038 0.91679 1.07226 1.19787 0.93749 0.94842 1.12990 1.24320 0.92889 1.07382 0.89681 1.86486 1.41234 1.92004 1.15095 0.95119 0.83562 0.75870 0.86938 1.21185 0.94224 0.94690 1.03710 1.19958 0.90315 0.87492 1.19111 1.16947 0.85446 0.83499 0.75720 1.90805 1.16123 1.84750 1.50577 1.45280 1.11493 1.04891 1.73712 1.21770 0.98984 0.79705 0.97526 0.87429 1.23351 0.98724 1.00097 0.95311 1.23067 0.98336 0.96271 0.97174 0.88379 1.21962 1.02340 0.97483 0.79127 1.45578 1.08138 1.53046 1.07261 1.22730 0.98045 1.11252 0.86632 1.22349 0.89063 1.07403 0.99094 1.70312 1.22715 1.19026 1.09287 1.25024 0.87821 1.05747 0.91753 1.23515 0.95592 1.00781 0.98518 0.90035 0.87667 0.89637 0.80891 0.87197 0.77552 1.18197 1.17996 0.83799 0.76037 0.87939 0.89974 0.88692 0.88480 0.81103 0.81451 0.78077 0.90712 0.88737 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.07 10.64 59.85 0.64 0.57 16 2 N -0.40 -0.24 3.16 -120.23 -0.38 -0.62 16 3 C 0.03 -0.02 9.94 -16.91 -0.17 -0.19 16 4 C -0.21 -0.01 5.43 -105.02 -0.57 -0.58 16 5 C -0.03 0.01 3.02 36.01 0.11 0.12 16 6 O -0.54 -0.08 12.88 -35.23 -0.45 -0.53 16 7 Si 0.68 -1.01 30.60 -169.99 -5.20 -6.21 16 8 C -0.11 -0.05 10.28 -39.12 -0.40 -0.46 16 9 C -0.06 -0.08 6.88 -81.98 -0.56 -0.64 16 10 C 0.60 1.12 7.77 -12.86 -0.10 1.02 16 11 O -0.54 -2.51 14.30 5.19 0.07 -2.44 16 12 N -0.70 0.75 5.24 -54.32 -0.28 0.46 16 13 C 0.13 -0.25 4.29 -67.12 -0.29 -0.54 16 14 H 0.11 -0.05 7.53 -51.93 -0.39 -0.44 16 15 C -0.14 0.61 7.39 -25.92 -0.19 0.42 16 16 C -0.13 0.50 3.84 -89.81 -0.34 0.15 16 17 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 18 C 0.11 -0.43 5.99 -4.04 -0.02 -0.45 16 19 N -0.46 0.22 2.75 -118.58 -0.33 -0.11 16 20 C -0.05 -0.03 11.58 -16.56 -0.19 -0.22 16 21 C -0.03 -0.09 11.87 -17.81 -0.21 -0.30 16 22 N -0.50 -2.27 11.25 -14.67 -0.16 -2.43 16 23 C 0.18 0.23 12.56 -90.38 -1.14 -0.91 16 24 C -0.15 0.36 7.43 -25.93 -0.19 0.17 16 25 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 26 H 0.10 0.07 6.22 -51.93 -0.32 -0.25 16 27 H 0.08 -0.28 8.14 -51.92 -0.42 -0.71 16 28 H 0.17 -0.62 6.21 -52.49 -0.33 -0.94 16 29 H 0.11 0.02 7.96 -51.93 -0.41 -0.39 16 30 H 0.38 -1.35 8.70 45.56 0.40 -0.95 16 31 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 32 H -0.26 -0.52 7.11 56.52 0.40 -0.11 16 33 H 0.14 -0.16 7.49 -52.48 -0.39 -0.56 16 34 H 0.40 -1.14 7.65 -40.82 -0.31 -1.45 16 35 H 0.10 -0.56 8.10 -51.93 -0.42 -0.98 16 36 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 37 H 0.09 -0.44 7.84 -51.93 -0.41 -0.85 16 38 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 39 H 0.17 -0.33 8.06 -52.49 -0.42 -0.75 16 40 H 0.17 0.19 8.06 -52.48 -0.42 -0.23 16 41 H 0.20 -0.39 8.06 -52.49 -0.42 -0.81 16 42 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 43 H 0.09 -0.31 7.90 -51.93 -0.41 -0.72 16 LS Contribution 361.93 15.07 5.45 5.45 Total: 0.00 -10.78 361.93 -10.93 -21.71 By element: Atomic # 1 Polarization: -7.44 SS G_CDS: -6.00 Total: -13.44 kcal Atomic # 6 Polarization: 1.80 SS G_CDS: -3.64 Total: -1.84 kcal Atomic # 7 Polarization: -1.54 SS G_CDS: -1.16 Total: -2.69 kcal Atomic # 8 Polarization: -2.59 SS G_CDS: -0.38 Total: -2.97 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.20 Total: -6.21 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -10.78 -10.93 -21.71 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_10803934.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 103.007 kcal (2) G-P(sol) polarization free energy of solvation -10.780 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.227 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.925 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.705 kcal (6) G-S(sol) free energy of system = (1) + (5) 81.302 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds