Wall clock time and date at job start Tue Mar 9 2021 12:56:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86305 * 109.47098 * 2 1 4 4 C 1.50696 * 109.46973 * 119.99580 * 2 1 3 5 5 C 1.36452 * 120.29762 * 119.97531 * 4 2 1 6 6 C 1.40087 * 119.25685 * 179.76964 * 5 4 2 7 7 C 1.40857 * 132.86757 * 179.65892 * 6 5 4 8 8 C 1.46571 * 126.57442 * 0.64573 * 7 6 5 9 9 O 1.21721 * 120.00108 * 359.71491 * 8 7 6 10 10 N 1.34776 * 119.99509 * 179.71263 * 8 7 6 11 11 C 1.46505 * 119.99495 * 180.02562 * 10 8 7 12 12 H 1.08999 * 112.84985 * 336.19332 * 11 10 8 13 13 C 1.53780 * 113.69080 * 107.46699 * 11 10 8 14 14 C 1.53784 * 87.08145 * 89.12493 * 13 11 10 15 15 H 1.08997 * 113.68549 * 270.87169 * 14 13 11 16 16 C 1.52998 * 113.61381 * 139.98089 * 14 13 11 17 17 N 1.46501 * 109.47123 * 87.49952 * 16 14 13 18 18 C 1.36882 * 126.40212 * 270.21179 * 17 16 14 19 19 C 1.34661 * 106.81949 * 180.25100 * 18 17 16 20 20 N 1.34124 * 108.02302 * 359.74697 * 19 18 17 21 21 C 1.30505 * 109.25474 * 359.97438 * 20 19 18 22 22 C 1.53780 * 113.61283 * 205.00120 * 11 10 8 23 23 C 1.40548 * 106.84326 * 180.38495 * 7 6 5 24 24 N 1.30736 * 108.74662 * 0.22678 * 23 7 6 25 25 N 1.36580 * 120.22927 * 0.48957 * 6 5 4 26 26 C 1.36241 * 120.08112 * 359.51399 * 25 6 5 27 27 C 1.35183 * 120.70518 * 0.24984 * 26 25 6 28 28 H 0.96699 * 113.99844 * 300.00664 * 1 2 3 29 29 H 1.08997 * 109.47387 * 239.99403 * 2 1 3 30 30 H 1.48500 * 109.99668 * 299.99370 * 3 2 1 31 31 H 1.48494 * 110.00309 * 61.31609 * 3 2 1 32 32 H 1.08003 * 120.36741 * 0.03008 * 5 4 2 33 33 H 0.96996 * 120.00662 * 0.02562 * 10 8 7 34 34 H 1.08998 * 113.61299 * 334.57294 * 13 11 10 35 35 H 1.08995 * 113.61186 * 203.67373 * 13 11 10 36 36 H 1.09006 * 109.46920 * 327.50335 * 16 14 13 37 37 H 1.08997 * 109.47249 * 207.50192 * 16 14 13 38 38 H 1.08008 * 126.58741 * 359.97438 * 18 17 16 39 39 H 1.08008 * 125.99263 * 179.71898 * 19 18 17 40 40 H 1.08002 * 125.64815 * 179.97438 * 21 20 19 41 41 H 1.08996 * 113.61787 * 156.24717 * 22 11 10 42 42 H 1.09002 * 113.68968 * 25.35880 * 22 11 10 43 43 H 1.08000 * 125.63011 * 180.24535 * 23 7 6 44 44 H 1.07993 * 119.64742 * 180.28023 * 26 25 6 45 45 H 1.08005 * 119.84055 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.7158 -1.8206 1.1124 6 6 3.1746 -2.4609 2.2708 7 6 3.9743 -3.6010 2.4826 8 6 4.5752 -4.4504 1.4503 9 8 4.3959 -4.1970 0.2733 10 7 5.3263 -5.5119 1.8043 11 6 5.9275 -6.3606 0.7724 12 1 5.3965 -6.3115 -0.1782 13 6 7.4493 -6.1856 0.6378 14 6 7.5910 -7.2872 1.7015 15 1 7.6002 -6.9099 2.7240 16 6 8.7307 -8.2683 1.4198 17 7 9.9746 -7.7496 1.9942 18 6 10.8800 -6.9348 1.3698 19 6 11.8716 -6.7062 2.2517 20 7 11.5771 -7.3590 3.3857 21 6 10.4402 -7.9830 3.2402 22 6 6.2134 -7.7958 1.2449 23 6 4.0904 -3.7642 3.8738 24 7 3.4178 -2.8124 4.4661 25 7 2.8306 -1.9827 3.5030 26 6 2.0468 -0.8736 3.6107 27 6 1.5965 -0.2368 2.5065 28 1 -0.3933 0.4418 0.7650 29 1 1.7924 -0.5139 -0.8899 30 1 1.5616 2.4678 -1.2086 31 1 1.5879 2.4586 1.2241 32 1 2.9833 -2.1988 0.1369 33 1 5.4690 -5.7141 2.7422 34 1 7.8077 -5.2108 0.9684 35 1 7.8367 -6.4707 -0.3403 36 1 8.8498 -8.3873 0.3428 37 1 8.4982 -9.2340 1.8685 38 1 10.8141 -6.5526 0.3617 39 1 12.7505 -6.1033 2.0764 40 1 9.9550 -8.5902 3.9901 41 1 6.2629 -8.5212 0.4328 42 1 5.5745 -8.1223 2.0655 43 1 4.6442 -4.5466 4.3714 44 1 1.7828 -0.4989 4.5885 45 1 0.9763 0.6416 2.6081 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_11618758.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:15 Heat of formation + Delta-G solvation = 137.745632 kcal Electronic energy + Delta-G solvation = -30009.775015 eV Core-core repulsion = 25805.183718 eV Total energy + Delta-G solvation = -4204.591297 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.148 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -43.35751 -42.91666 -41.16251 -39.62530 -39.10205 -37.38416 -35.33955 -34.30924 -33.74154 -32.16305 -30.53625 -30.29185 -28.82714 -27.32231 -26.92404 -25.28529 -24.47161 -23.60504 -23.09403 -22.17567 -21.81132 -21.41182 -20.40639 -19.22732 -18.69544 -18.38339 -18.02399 -17.56145 -17.08321 -16.99871 -16.61629 -16.50221 -16.01126 -15.96080 -15.61643 -15.53772 -15.17572 -14.93809 -14.84316 -14.79054 -14.56639 -14.30843 -14.16916 -13.90201 -13.84773 -13.64397 -13.58274 -13.31488 -12.92661 -12.52559 -12.49294 -12.13944 -11.96634 -11.82084 -11.60328 -11.52126 -10.95987 -10.84646 -10.80114 -10.44728 -10.41578 -10.08364 -9.37030 -8.82609 -5.08661 -0.61199 -0.21221 0.93469 1.01257 1.07567 1.19193 1.45002 1.77277 1.84177 2.00830 2.12598 2.36551 2.52021 2.99643 3.09703 3.18182 3.22672 3.29061 3.37406 3.51341 3.57698 3.63330 3.79073 3.86465 3.88646 3.91648 3.99338 4.05745 4.06598 4.19721 4.27366 4.27849 4.45612 4.49726 4.50630 4.60054 4.63839 4.74422 4.78994 4.86969 4.88529 4.99325 5.02266 5.10655 5.20389 5.37531 5.53877 5.58148 5.89104 6.17998 6.25152 6.30027 6.52302 7.24243 7.32079 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.521 6.521 2 C -0.076 4.076 3 Si 0.696 3.304 4 C -0.065 4.065 5 C -0.091 4.091 6 C 0.171 3.829 7 C -0.317 4.317 8 C 0.605 3.395 9 O -0.546 6.546 10 N -0.713 5.713 11 C 0.127 3.873 12 H 0.108 0.892 13 C -0.146 4.146 14 C -0.129 4.129 15 H 0.097 0.903 16 C 0.113 3.887 17 N -0.457 5.457 18 C -0.053 4.053 19 C -0.032 4.032 20 N -0.496 5.496 21 C 0.178 3.822 22 C -0.137 4.137 23 C 0.121 3.879 24 N -0.312 5.312 25 N -0.266 5.266 26 C 0.124 3.876 27 C -0.162 4.162 28 H 0.375 0.625 29 H 0.127 0.873 30 H -0.247 1.247 31 H -0.253 1.253 32 H 0.165 0.835 33 H 0.398 0.602 34 H 0.074 0.926 35 H 0.093 0.907 36 H 0.095 0.905 37 H 0.096 0.904 38 H 0.172 0.828 39 H 0.168 0.832 40 H 0.202 0.798 41 H 0.100 0.900 42 H 0.080 0.920 43 H 0.198 0.802 44 H 0.178 0.822 45 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.821 0.074 -0.221 1.836 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.184 4.184 3 Si 0.594 3.406 4 C -0.070 4.070 5 C -0.110 4.110 6 C 0.050 3.950 7 C -0.332 4.332 8 C 0.395 3.605 9 O -0.424 6.424 10 N -0.364 5.364 11 C 0.021 3.979 12 H 0.126 0.874 13 C -0.185 4.185 14 C -0.148 4.148 15 H 0.116 0.884 16 C -0.009 4.009 17 N -0.140 5.140 18 C -0.186 4.186 19 C -0.180 4.180 20 N -0.214 5.214 21 C -0.104 4.104 22 C -0.176 4.176 23 C -0.060 4.060 24 N -0.132 5.132 25 N -0.030 5.030 26 C -0.002 4.002 27 C -0.183 4.183 28 H 0.223 0.777 29 H 0.144 0.856 30 H -0.171 1.171 31 H -0.177 1.177 32 H 0.183 0.817 33 H 0.233 0.767 34 H 0.093 0.907 35 H 0.111 0.889 36 H 0.113 0.887 37 H 0.114 0.886 38 H 0.189 0.811 39 H 0.185 0.815 40 H 0.219 0.781 41 H 0.119 0.881 42 H 0.098 0.902 43 H 0.214 0.786 44 H 0.195 0.805 45 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -2.015 1.125 0.265 2.323 hybrid contribution -1.160 -0.695 -0.248 1.375 sum -3.175 0.430 0.017 3.204 Atomic orbital electron populations 1.86710 1.16840 1.80017 1.49171 1.25085 0.84332 1.11363 0.97660 0.94397 0.91672 0.73207 0.81323 1.20428 0.96094 0.94960 0.95562 1.20698 0.97999 0.94176 0.98151 1.19289 0.95478 0.94038 0.86197 1.19570 1.16509 1.03613 0.93491 1.16804 0.77037 0.79349 0.87322 1.90789 1.61566 1.71560 1.18512 1.45343 1.52546 1.28996 1.09467 1.21713 0.93647 0.89665 0.92892 0.87428 1.23520 0.96492 0.99369 0.99082 1.23065 0.94100 0.97003 1.00673 0.88442 1.21972 0.81165 0.97549 1.00261 1.45580 1.18227 1.37420 1.12733 1.22733 0.93188 1.01691 1.00956 1.22343 1.00776 1.04430 0.90409 1.70312 1.13192 1.11923 1.25927 1.25013 0.94111 1.04088 0.87235 1.23347 0.95365 0.96581 1.02297 1.24053 0.94296 0.95725 0.91975 1.77653 1.18457 1.06387 1.10721 1.46083 1.32071 1.19038 1.05850 1.21525 0.91868 0.85064 1.01784 1.20717 1.04310 1.02603 0.90696 0.77696 0.85557 1.17085 1.17657 0.81715 0.76736 0.90688 0.88872 0.88703 0.88567 0.81084 0.81465 0.78123 0.88124 0.90166 0.78569 0.80526 0.82557 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.16 12.88 -35.23 -0.45 -0.29 16 2 C -0.08 0.12 2.84 36.00 0.10 0.23 16 3 Si 0.70 -1.71 31.97 -169.99 -5.43 -7.15 16 4 C -0.06 0.07 4.53 -104.54 -0.47 -0.41 16 5 C -0.09 -0.09 9.35 -39.53 -0.37 -0.46 16 6 C 0.17 0.38 6.76 -84.07 -0.57 -0.18 16 7 C -0.32 -0.58 6.17 -104.68 -0.65 -1.23 16 8 C 0.61 1.30 7.78 -12.90 -0.10 1.20 16 9 O -0.55 -2.86 15.30 5.17 0.08 -2.79 16 10 N -0.71 0.87 5.26 -54.35 -0.29 0.59 16 11 C 0.13 -0.24 4.32 -67.12 -0.29 -0.53 16 12 H 0.11 -0.01 7.46 -51.93 -0.39 -0.40 16 13 C -0.15 0.37 7.43 -25.92 -0.19 0.18 16 14 C -0.13 0.52 3.84 -89.81 -0.35 0.18 16 15 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 16 C 0.11 -0.44 5.99 -4.04 -0.02 -0.46 16 17 N -0.46 0.31 2.75 -118.57 -0.33 -0.02 16 18 C -0.05 -0.02 11.58 -16.56 -0.19 -0.21 16 19 C -0.03 -0.08 11.87 -17.82 -0.21 -0.30 16 20 N -0.50 -2.14 11.25 -14.66 -0.16 -2.31 16 21 C 0.18 0.19 12.56 -90.37 -1.14 -0.95 16 22 C -0.14 0.61 7.39 -25.92 -0.19 0.42 16 23 C 0.12 0.03 11.44 -17.15 -0.20 -0.16 16 24 N -0.31 -0.71 12.57 30.75 0.39 -0.32 16 25 N -0.27 -0.44 3.86 -10.55 -0.04 -0.48 16 26 C 0.12 -0.15 11.17 -16.68 -0.19 -0.34 16 27 C -0.16 0.38 8.38 -39.95 -0.33 0.05 16 28 H 0.38 -1.47 8.08 45.56 0.37 -1.10 16 29 H 0.13 -0.25 7.71 -51.93 -0.40 -0.65 16 30 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 31 H -0.25 0.35 7.05 56.52 0.40 0.75 16 32 H 0.17 0.20 7.01 -52.48 -0.37 -0.17 16 33 H 0.40 -1.45 7.62 -40.82 -0.31 -1.76 16 34 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 35 H 0.09 -0.30 7.90 -51.93 -0.41 -0.71 16 36 H 0.09 -0.44 7.84 -51.93 -0.41 -0.85 16 37 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 38 H 0.17 -0.35 8.06 -52.48 -0.42 -0.78 16 39 H 0.17 0.16 8.06 -52.48 -0.42 -0.26 16 40 H 0.20 -0.44 8.06 -52.49 -0.42 -0.86 16 41 H 0.10 -0.53 8.10 -51.93 -0.42 -0.95 16 42 H 0.08 -0.37 8.14 -51.93 -0.42 -0.80 16 43 H 0.20 -0.77 7.46 -52.49 -0.39 -1.16 16 44 H 0.18 -0.69 8.06 -52.49 -0.42 -1.12 16 45 H 0.16 -0.80 7.26 -52.48 -0.38 -1.18 16 LS Contribution 384.65 15.07 5.80 5.80 Total: 0.00 -12.40 384.65 -11.49 -23.89 By element: Atomic # 1 Polarization: -8.25 SS G_CDS: -5.69 Total: -13.94 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: -5.35 Total: -2.99 kcal Atomic # 7 Polarization: -2.10 SS G_CDS: -0.43 Total: -2.54 kcal Atomic # 8 Polarization: -2.70 SS G_CDS: -0.37 Total: -3.08 kcal Atomic # 14 Polarization: -1.71 SS G_CDS: -5.43 Total: -7.15 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -12.40 -11.49 -23.89 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_11618758.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 161.637 kcal (2) G-P(sol) polarization free energy of solvation -12.402 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 149.236 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.490 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.892 kcal (6) G-S(sol) free energy of system = (1) + (5) 137.746 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds