Wall clock time and date at job start Tue Mar 9 2021 12:59:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.36002 * 116.99695 * 2 1 4 4 C 1.39150 * 120.07135 * 179.97438 * 3 2 1 5 5 O 1.35996 * 120.07700 * 0.02562 * 4 3 2 6 6 C 1.42899 * 117.00323 * 179.72282 * 5 4 3 7 7 C 1.50700 * 109.47143 * 179.97438 * 6 5 4 8 8 O 1.21283 * 119.99803 * 359.97438 * 7 6 5 9 9 N 1.34777 * 119.99675 * 180.27800 * 7 6 5 10 10 C 1.46497 * 119.99525 * 179.72583 * 9 7 6 11 11 H 1.09001 * 112.85727 * 336.19659 * 10 9 7 12 12 C 1.53787 * 113.61668 * 107.50061 * 10 9 7 13 13 C 1.53786 * 87.08169 * 89.11277 * 12 10 9 14 14 H 1.09000 * 113.61405 * 270.88740 * 13 12 10 15 15 C 1.52990 * 113.61433 * 139.98283 * 13 12 10 16 16 N 1.46500 * 109.47249 * 87.50516 * 15 13 12 17 17 C 1.36882 * 126.39686 * 269.71645 * 16 15 13 18 18 C 1.34672 * 106.82014 * 179.84174 * 17 16 15 19 19 N 1.34127 * 108.01559 * 0.41725 * 18 17 16 20 20 C 1.30498 * 109.25695 * 359.73840 * 19 18 17 21 21 C 1.53784 * 113.61535 * 204.99648 * 10 9 7 22 22 C 1.38562 * 119.85396 * 179.73127 * 4 3 2 23 23 C 1.38250 * 119.99637 * 0.27483 * 22 4 3 24 24 C 1.38247 * 120.14852 * 0.02562 * 23 22 4 25 25 C 1.50694 * 119.92821 * 179.97438 * 24 23 22 26 26 O 1.42905 * 109.47192 * 244.99803 * 25 24 23 27 27 Si 1.86301 * 109.47119 * 4.99728 * 25 24 23 28 28 C 1.38249 * 120.14422 * 359.97438 * 24 23 22 29 29 H 1.09002 * 109.47278 * 59.99837 * 1 2 3 30 30 H 1.09001 * 109.46450 * 179.97438 * 1 2 3 31 31 H 1.08993 * 109.47320 * 299.99285 * 1 2 3 32 32 H 1.09009 * 109.46798 * 59.99577 * 6 5 4 33 33 H 1.08998 * 109.46844 * 300.00081 * 6 5 4 34 34 H 0.97000 * 119.99894 * 359.71837 * 9 7 6 35 35 H 1.09001 * 113.61644 * 203.66224 * 12 10 9 36 36 H 1.09007 * 113.61035 * 334.56829 * 12 10 9 37 37 H 1.09004 * 109.47241 * 207.50486 * 15 13 12 38 38 H 1.09004 * 109.47544 * 327.50703 * 15 13 12 39 39 H 1.08004 * 126.59415 * 359.97438 * 17 16 15 40 40 H 1.08003 * 125.99032 * 180.11554 * 18 17 16 41 41 H 1.08006 * 125.64755 * 180.02562 * 20 19 18 42 42 H 1.09005 * 113.60893 * 25.43122 * 21 10 9 43 43 H 1.08995 * 113.61535 * 156.33378 * 21 10 9 44 44 H 1.07996 * 120.00583 * 180.25605 * 22 4 3 45 45 H 1.07999 * 119.92172 * 180.02562 * 23 22 4 46 46 H 1.08995 * 109.47777 * 124.99906 * 25 24 23 47 47 H 0.96696 * 114.00185 * 180.02562 * 26 25 24 48 48 H 1.48503 * 109.99806 * 178.68299 * 27 25 24 49 49 H 1.48502 * 109.99918 * 299.99841 * 27 25 24 50 50 H 1.08000 * 119.99571 * 180.02562 * 28 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2118 0.0000 4 6 3.4359 1.2865 0.0005 5 8 4.1796 0.1479 0.0005 6 6 5.6003 0.3009 -0.0051 7 6 6.2519 -1.0579 -0.0035 8 8 5.5671 -2.0589 0.0023 9 7 7.5958 -1.1608 -0.0025 10 6 8.2292 -2.4817 0.0051 11 1 7.5835 -3.2586 0.4145 12 6 8.8782 -2.8615 -1.3365 13 6 10.1587 -2.1855 -0.8186 14 1 10.2149 -1.1217 -1.0493 15 6 11.4393 -2.9414 -1.1785 16 7 11.9102 -2.5050 -2.4953 17 6 11.5747 -3.0572 -3.7019 18 6 12.2242 -2.3517 -4.6475 19 7 12.9441 -1.4006 -4.0342 20 6 12.7610 -1.4864 -2.7450 21 6 9.6469 -2.4818 0.6010 22 6 4.0602 2.5234 -0.0051 23 6 3.3027 3.6800 -0.0055 24 6 1.9222 3.6058 0.0003 25 6 1.1014 4.8696 0.0004 26 8 0.3693 4.9620 1.2242 27 14 2.2300 6.3431 -0.1609 28 6 1.2931 2.3748 0.0059 29 1 -0.3634 0.5139 -0.8900 30 1 -0.3632 -1.0277 -0.0005 31 1 -0.3633 0.5137 0.8900 32 1 5.9098 0.8529 0.8825 33 1 5.9032 0.8485 -0.8975 34 1 8.1435 -0.3602 -0.0068 35 1 8.9807 -3.9367 -1.4831 36 1 8.4344 -2.3565 -2.1946 37 1 12.2056 -2.7342 -0.4315 38 1 11.2349 -4.0118 -1.2022 39 1 10.9142 -3.8961 -3.8647 40 1 12.1777 -2.5249 -5.7126 41 1 13.2143 -0.8481 -2.0010 42 1 9.8236 -1.6703 1.3071 43 1 9.9595 -3.4531 0.9841 44 1 5.1384 2.5842 -0.0089 45 1 3.7906 4.6435 -0.0103 46 1 0.4058 4.8512 -0.8385 47 1 -0.1828 5.7528 1.2934 48 1 1.4304 7.5940 -0.1940 49 1 3.1833 6.3796 0.9771 50 1 0.2145 2.3196 0.0100 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_60476.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:44 Heat of formation + Delta-G solvation = -3.234772 kcal Electronic energy + Delta-G solvation = -32892.712600 eV Core-core repulsion = 28276.410033 eV Total energy + Delta-G solvation = -4616.302566 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.96280 -41.81450 -41.31370 -39.94950 -38.99669 -38.72325 -37.10859 -35.45837 -33.99568 -32.13780 -31.44837 -30.43705 -29.90480 -28.65192 -28.33750 -27.01574 -26.18342 -24.50650 -23.53800 -22.49678 -22.21730 -21.91194 -21.79974 -20.55403 -19.70756 -18.69509 -18.57006 -18.22855 -18.17409 -17.55644 -17.49192 -17.10513 -16.63965 -16.50297 -16.19417 -16.05079 -15.82584 -15.70132 -15.48367 -15.32068 -14.98360 -14.91249 -14.73907 -14.37703 -14.24348 -14.06799 -14.01858 -13.97136 -13.72765 -13.54259 -13.48409 -12.99879 -12.80180 -12.60333 -12.54998 -12.22839 -12.15080 -11.92132 -11.90517 -11.68338 -11.61037 -10.94313 -10.84002 -10.54679 -10.50190 -10.25420 -9.75394 -9.40888 -8.83255 -5.01074 0.20032 0.32500 1.15099 1.22811 1.37205 1.43323 1.54846 1.79620 1.90300 2.32821 2.33334 2.47597 2.55010 3.09425 3.19659 3.28763 3.38240 3.46329 3.52391 3.68414 3.75136 3.79701 3.82935 3.83787 3.89993 3.93583 3.95378 4.01138 4.15474 4.21232 4.23259 4.29718 4.31465 4.41109 4.42392 4.43295 4.56122 4.57765 4.60407 4.65476 4.70435 4.77891 4.83499 4.87298 5.01187 5.11858 5.32226 5.35132 5.42117 5.56833 5.85339 5.96373 6.24651 6.26085 6.38488 6.55801 7.04232 7.20455 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.104 3.896 5 O -0.277 6.277 6 C 0.039 3.961 7 C 0.519 3.481 8 O -0.505 6.505 9 N -0.713 5.713 10 C 0.123 3.877 11 H 0.109 0.891 12 C -0.146 4.146 13 C -0.129 4.129 14 H 0.098 0.902 15 C 0.113 3.887 16 N -0.457 5.457 17 C -0.053 4.053 18 C -0.031 4.031 19 N -0.495 5.495 20 C 0.178 3.822 21 C -0.136 4.136 22 C -0.169 4.169 23 C -0.111 4.111 24 C -0.068 4.068 25 C -0.074 4.074 26 O -0.536 6.536 27 Si 0.685 3.315 28 C -0.145 4.145 29 H 0.056 0.944 30 H 0.103 0.897 31 H 0.056 0.944 32 H 0.095 0.905 33 H 0.096 0.904 34 H 0.402 0.598 35 H 0.095 0.905 36 H 0.075 0.925 37 H 0.097 0.903 38 H 0.095 0.905 39 H 0.172 0.828 40 H 0.168 0.832 41 H 0.202 0.798 42 H 0.081 0.919 43 H 0.102 0.898 44 H 0.140 0.860 45 H 0.133 0.867 46 H 0.076 0.924 47 H 0.380 0.620 48 H -0.261 1.261 49 H -0.254 1.254 50 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.122 2.233 0.916 2.662 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.061 3.939 4 C 0.058 3.942 5 O -0.189 6.189 6 C -0.040 4.040 7 C 0.304 3.696 8 O -0.378 6.378 9 N -0.366 5.366 10 C 0.018 3.982 11 H 0.127 0.873 12 C -0.184 4.184 13 C -0.148 4.148 14 H 0.116 0.884 15 C -0.009 4.009 16 N -0.140 5.140 17 C -0.186 4.186 18 C -0.179 4.179 19 N -0.213 5.213 20 C -0.104 4.104 21 C -0.174 4.174 22 C -0.187 4.187 23 C -0.129 4.129 24 C -0.068 4.068 25 C -0.184 4.184 26 O -0.344 6.344 27 Si 0.586 3.414 28 C -0.164 4.164 29 H 0.074 0.926 30 H 0.121 0.879 31 H 0.075 0.925 32 H 0.113 0.887 33 H 0.113 0.887 34 H 0.237 0.763 35 H 0.113 0.887 36 H 0.094 0.906 37 H 0.115 0.885 38 H 0.113 0.887 39 H 0.189 0.811 40 H 0.186 0.814 41 H 0.219 0.781 42 H 0.099 0.901 43 H 0.120 0.880 44 H 0.158 0.842 45 H 0.150 0.850 46 H 0.094 0.906 47 H 0.228 0.772 48 H -0.187 1.187 49 H -0.179 1.179 50 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 1.638 1.792 1.137 2.681 hybrid contribution -1.356 0.358 1.056 1.756 sum 0.282 2.150 2.193 3.084 Atomic orbital electron populations 1.23127 0.78184 1.04377 1.01336 1.86247 1.21295 1.25315 1.88596 1.18236 0.88990 0.85504 1.01149 1.18252 0.88270 0.85708 1.01969 1.86271 1.15908 1.27791 1.88937 1.22460 0.81452 0.96040 1.04072 1.20044 0.82294 0.90663 0.76599 1.90803 1.62524 1.38020 1.46465 1.45460 1.05889 1.08850 1.76440 1.21784 0.93808 0.85620 0.96991 0.87327 1.23528 0.95270 1.01526 0.98122 1.23071 0.93712 1.00762 0.97274 0.88376 1.21960 0.96732 1.00173 0.82077 1.45574 1.35400 1.25964 1.07083 1.22745 1.07230 1.04044 0.84595 1.22354 0.99838 0.95901 0.99796 1.70313 1.23356 1.23261 1.04377 1.25016 0.96767 0.93732 0.94928 1.23344 0.94472 1.03893 0.95708 1.20958 1.00417 0.90595 1.06776 1.20670 0.92696 0.98066 1.01477 1.18927 0.92922 0.93148 1.01817 1.24781 1.00503 1.04030 0.89061 1.86598 1.62533 1.47414 1.37807 0.95004 0.81633 0.75344 0.89400 1.20914 1.00307 0.90439 1.04698 0.92555 0.87879 0.92533 0.88737 0.88661 0.76300 0.88697 0.90635 0.88515 0.88671 0.81076 0.81426 0.78107 0.90061 0.87957 0.84248 0.84977 0.90579 0.77236 1.18657 1.17903 0.84310 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.39 10.28 -34.25 -0.35 -1.74 16 3 C 0.11 0.41 6.70 -39.12 -0.26 0.15 16 4 C 0.10 0.32 6.70 -39.12 -0.26 0.06 16 5 O -0.28 -1.11 9.45 -47.35 -0.45 -1.56 16 6 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 7 C 0.52 0.65 7.91 -10.98 -0.09 0.56 16 8 O -0.51 -3.28 16.10 -14.36 -0.23 -3.51 16 9 N -0.71 1.70 5.26 -53.01 -0.28 1.43 16 10 C 0.12 -0.29 4.32 -67.11 -0.29 -0.58 16 11 H 0.11 -0.03 7.46 -51.93 -0.39 -0.41 16 12 C -0.15 0.43 7.43 -25.91 -0.19 0.23 16 13 C -0.13 0.59 3.84 -89.81 -0.34 0.24 16 14 H 0.10 -0.40 8.14 -51.93 -0.42 -0.83 16 15 C 0.11 -0.48 5.99 -4.05 -0.02 -0.51 16 16 N -0.46 0.48 2.75 -118.58 -0.33 0.15 16 17 C -0.05 -0.01 11.58 -16.56 -0.19 -0.20 16 18 C -0.03 -0.07 11.87 -17.81 -0.21 -0.28 16 19 N -0.50 -1.96 11.25 -14.66 -0.16 -2.13 16 20 C 0.18 0.12 12.56 -90.38 -1.14 -1.02 16 21 C -0.14 0.68 7.39 -25.91 -0.19 0.49 16 22 C -0.17 -0.05 9.04 -39.46 -0.36 -0.40 16 23 C -0.11 -0.04 8.66 -39.57 -0.34 -0.38 16 24 C -0.07 -0.10 5.38 -104.62 -0.56 -0.66 16 25 C -0.07 0.02 2.79 36.00 0.10 0.12 16 26 O -0.54 -0.56 12.81 -35.23 -0.45 -1.01 16 27 Si 0.68 -0.88 29.84 -169.99 -5.07 -5.95 16 28 C -0.14 -0.32 8.67 -39.46 -0.34 -0.67 16 29 H 0.06 -0.05 7.68 -51.93 -0.40 -0.45 16 30 H 0.10 -0.10 8.14 -51.93 -0.42 -0.52 16 31 H 0.06 -0.02 7.65 -51.93 -0.40 -0.41 16 32 H 0.09 -0.32 7.66 -51.92 -0.40 -0.72 16 33 H 0.10 -0.33 7.66 -51.93 -0.40 -0.73 16 34 H 0.40 -2.18 8.70 -40.82 -0.36 -2.53 16 35 H 0.09 -0.32 7.90 -51.93 -0.41 -0.73 16 36 H 0.07 -0.08 8.14 -51.92 -0.42 -0.51 16 37 H 0.10 -0.54 8.14 -51.93 -0.42 -0.96 16 38 H 0.09 -0.47 7.84 -51.93 -0.41 -0.88 16 39 H 0.17 -0.39 8.06 -52.48 -0.42 -0.81 16 40 H 0.17 0.12 8.06 -52.48 -0.42 -0.31 16 41 H 0.20 -0.53 8.06 -52.48 -0.42 -0.95 16 42 H 0.08 -0.44 8.14 -51.93 -0.42 -0.86 16 43 H 0.10 -0.58 8.10 -51.93 -0.42 -1.01 16 44 H 0.14 -0.43 6.30 -52.49 -0.33 -0.76 16 45 H 0.13 -0.22 4.85 -52.49 -0.25 -0.48 16 46 H 0.08 -0.14 7.96 -51.93 -0.41 -0.56 16 47 H 0.38 -1.13 8.74 45.56 0.40 -0.73 16 48 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 49 H -0.25 -0.41 7.05 56.52 0.40 -0.01 16 50 H 0.14 0.12 6.30 -52.49 -0.33 -0.21 16 LS Contribution 417.47 15.07 6.29 6.29 Total: 0.00 -14.26 417.47 -11.64 -25.90 By element: Atomic # 1 Polarization: -9.08 SS G_CDS: -7.09 Total: -16.17 kcal Atomic # 6 Polarization: 1.82 SS G_CDS: -3.52 Total: -1.70 kcal Atomic # 7 Polarization: 0.22 SS G_CDS: -0.77 Total: -0.55 kcal Atomic # 8 Polarization: -6.34 SS G_CDS: -1.48 Total: -7.82 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.07 Total: -5.95 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -14.26 -11.64 -25.90 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_60476.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.662 kcal (2) G-P(sol) polarization free energy of solvation -14.258 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.404 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.639 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.897 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.235 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds