Wall clock time and date at job start Tue Mar 9 2021 12:59:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 110.99883 * 2 1 4 4 C 1.50698 * 109.47231 * 293.94831 * 3 2 1 5 5 O 1.21280 * 119.99906 * 0.02562 * 4 3 2 6 6 N 1.34782 * 120.00066 * 179.97438 * 4 3 2 7 7 C 1.46490 * 119.99811 * 180.02562 * 6 4 3 8 8 H 1.09004 * 112.85442 * 25.33258 * 7 6 4 9 9 C 1.53787 * 113.61458 * 156.53070 * 7 6 4 10 10 C 1.53780 * 87.07897 * 89.11482 * 9 7 6 11 11 H 1.08998 * 113.61414 * 270.88254 * 10 9 7 12 12 C 1.53002 * 113.61532 * 140.06723 * 10 9 7 13 13 N 1.46494 * 109.47332 * 174.99938 * 12 10 9 14 14 C 1.36883 * 126.39637 * 269.71208 * 13 12 10 15 15 C 1.34674 * 106.81755 * 179.84335 * 14 13 12 16 16 N 1.34132 * 108.01751 * 0.42266 * 15 14 13 17 17 C 1.30494 * 109.25748 * 359.73430 * 16 15 14 18 18 C 1.53790 * 113.61406 * 254.13815 * 7 6 4 19 19 C 1.39670 * 110.99877 * 123.95091 * 2 1 3 20 20 C 1.38894 * 120.07287 * 116.04800 * 19 2 1 21 21 C 1.50699 * 120.03836 * 359.95614 * 20 19 2 22 22 O 1.42901 * 109.46830 * 284.99970 * 21 20 19 23 23 Si 1.86298 * 109.46950 * 165.00408 * 21 20 19 24 24 C 1.38123 * 119.92315 * 180.23656 * 20 19 2 25 25 C 1.38274 * 120.07640 * 359.51206 * 24 20 19 26 26 C 1.50699 * 119.92481 * 180.23693 * 25 24 20 27 27 F 1.39905 * 109.46900 * 180.23041 * 26 25 24 28 28 F 1.39898 * 109.47059 * 300.22877 * 26 25 24 29 29 F 1.39898 * 109.47194 * 60.22865 * 26 25 24 30 30 C 1.38309 * 120.14662 * 0.46321 * 25 24 20 31 31 C 1.38085 * 120.07456 * 359.79271 * 30 25 24 32 32 H 1.08998 * 109.47379 * 296.04901 * 1 2 3 33 33 H 1.09003 * 109.47009 * 56.04687 * 1 2 3 34 34 H 1.09000 * 109.47252 * 176.04607 * 1 2 3 35 35 H 1.09001 * 109.47641 * 53.95320 * 3 2 1 36 36 H 1.09001 * 109.47076 * 173.94851 * 3 2 1 37 37 H 0.96996 * 119.99500 * 0.02562 * 6 4 3 38 38 H 1.08999 * 113.61417 * 203.66185 * 9 7 6 39 39 H 1.08997 * 113.61427 * 334.48549 * 9 7 6 40 40 H 1.09002 * 109.47359 * 294.99963 * 12 10 9 41 41 H 1.09004 * 109.47146 * 54.99620 * 12 10 9 42 42 H 1.08003 * 126.59507 * 359.97438 * 14 13 12 43 43 H 1.08003 * 125.99204 * 180.19166 * 15 14 13 44 44 H 1.07999 * 125.64677 * 180.02562 * 17 16 15 45 45 H 1.08991 * 113.61069 * 25.43082 * 18 7 6 46 46 H 1.08995 * 113.61106 * 156.33834 * 18 7 6 47 47 H 1.08991 * 109.47351 * 45.00118 * 21 20 19 48 48 H 0.96708 * 114.00246 * 299.99864 * 22 21 20 49 49 H 1.48506 * 109.99834 * 180.02562 * 23 21 20 50 50 H 1.48502 * 110.00011 * 301.31529 * 23 21 20 51 51 H 1.07998 * 119.96531 * 179.74813 * 24 20 19 52 52 H 1.07999 * 119.95955 * 179.77012 * 30 25 24 53 53 H 1.07995 * 120.03808 * 179.97438 * 31 30 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.6370 2.0471 -1.2985 5 8 1.0049 1.4456 -2.1408 6 7 2.0181 3.3202 -1.5233 7 6 1.6692 3.9771 -2.7853 8 1 0.7804 3.5524 -3.2521 9 6 1.6434 5.5121 -2.6943 10 6 3.1363 5.4805 -3.0618 11 1 3.7969 5.4027 -2.1983 12 6 3.5526 6.5893 -4.0304 13 7 5.0041 6.5486 -4.2244 14 6 5.9412 7.2213 -3.4875 15 6 7.1444 6.8986 -3.9993 16 7 6.9467 6.0593 -5.0267 17 6 5.6672 5.8452 -5.1674 18 6 2.8577 4.1303 -3.7493 19 6 1.9695 -0.7282 1.0816 20 6 2.7117 -1.8813 0.8607 21 6 2.9774 -2.3492 -0.5470 22 8 1.7902 -2.9334 -1.0868 23 14 4.3423 -3.6170 -0.5327 24 6 3.2010 -2.6017 1.9327 25 6 2.9614 -2.1708 3.2245 26 6 3.5014 -2.9566 4.3915 27 9 3.1282 -2.3324 5.5867 28 9 2.9804 -4.2546 4.3608 29 9 4.8969 -3.0123 4.3105 30 6 2.2231 -1.0228 3.4481 31 6 1.7265 -0.3006 2.3810 32 1 -0.3634 0.4513 0.9232 33 1 -0.3633 0.5740 -0.8525 34 1 -0.3634 -1.0252 -0.0709 35 1 1.5611 1.9274 0.8309 36 1 3.0797 1.3444 0.1083 37 1 2.5234 3.8013 -0.8495 38 1 1.0172 5.9839 -3.4515 39 1 1.4475 5.8866 -1.6896 40 1 3.0538 6.4413 -4.9882 41 1 3.2681 7.5575 -3.6183 42 1 5.7522 7.8820 -2.6543 43 1 8.1006 7.2562 -3.6468 44 1 5.2137 5.2102 -5.9141 45 1 3.6428 3.3902 -3.5953 46 1 2.5628 4.2251 -4.7943 47 1 3.2764 -1.5003 -1.1617 48 1 1.4658 -3.6964 -0.5889 49 1 4.6143 -4.0860 -1.9153 50 1 5.5735 -3.0313 0.0558 51 1 3.7747 -3.5006 1.7617 52 1 2.0346 -0.6910 4.4584 53 1 1.1498 0.5955 2.5563 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14688108_6406254.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:50 Heat of formation + Delta-G solvation = -66.339052 kcal Electronic energy + Delta-G solvation = -41395.941214 eV Core-core repulsion = 35629.403549 eV Total energy + Delta-G solvation = -5766.537665 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 425.171 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -51.18943 -48.71715 -48.64875 -42.96558 -41.80468 -41.07657 -39.61628 -37.69983 -37.52027 -35.37435 -33.91165 -32.99060 -32.11198 -30.43226 -29.75526 -28.48510 -27.56944 -26.99686 -26.73409 -25.20903 -24.18111 -23.28704 -22.28941 -22.18290 -21.83245 -21.58852 -20.30789 -19.61653 -19.50829 -19.40677 -18.66561 -18.30519 -17.75274 -17.52190 -17.17697 -16.91401 -16.50326 -16.43536 -16.25107 -16.02777 -15.63944 -15.55460 -15.50986 -15.40408 -15.22310 -15.11367 -15.08945 -14.97384 -14.86857 -14.80794 -14.72205 -14.64885 -14.57908 -14.25186 -14.23428 -13.96397 -13.72366 -13.64730 -13.43223 -13.25961 -12.97920 -12.85554 -12.72000 -12.57255 -12.35533 -12.30194 -11.98892 -11.73034 -11.35974 -10.96261 -10.92144 -10.49561 -10.41696 -10.22385 -10.12059 -10.08415 -9.57295 -9.45961 -5.09750 -0.34921 0.01144 1.14242 1.23498 1.53361 1.55293 1.60110 1.88318 1.91452 1.92105 2.17952 2.21488 2.63193 2.74662 2.94625 3.36836 3.36942 3.47667 3.47902 3.59819 3.67200 3.71121 3.72866 3.78054 3.86681 4.02006 4.04447 4.05278 4.08144 4.10947 4.19712 4.24102 4.25096 4.39974 4.47890 4.50604 4.51903 4.59477 4.63870 4.68487 4.74387 4.77469 4.82132 4.87470 4.96909 4.97414 4.99403 5.04007 5.14952 5.19011 5.34368 5.39990 5.56812 5.64521 5.82149 6.14840 6.29952 6.48179 6.82809 7.15158 7.21058 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 N -0.502 5.502 3 C 0.037 3.963 4 C 0.514 3.486 5 O -0.558 6.558 6 N -0.704 5.704 7 C 0.114 3.886 8 H 0.084 0.916 9 C -0.116 4.116 10 C -0.114 4.114 11 H 0.093 0.907 12 C 0.109 3.891 13 N -0.451 5.451 14 C -0.046 4.046 15 C -0.068 4.068 16 N -0.547 5.547 17 C 0.173 3.827 18 C -0.150 4.150 19 C 0.139 3.861 20 C -0.104 4.104 21 C -0.045 4.045 22 O -0.543 6.543 23 Si 0.748 3.252 24 C -0.060 4.060 25 C -0.186 4.186 26 C 0.509 3.491 27 F -0.178 7.178 28 F -0.177 7.177 29 F -0.182 7.182 30 C -0.053 4.053 31 C -0.144 4.144 32 H 0.046 0.954 33 H 0.074 0.926 34 H 0.067 0.933 35 H 0.101 0.899 36 H 0.115 0.885 37 H 0.414 0.586 38 H 0.115 0.885 39 H 0.092 0.908 40 H 0.111 0.889 41 H 0.115 0.885 42 H 0.203 0.797 43 H 0.172 0.828 44 H 0.219 0.781 45 H 0.049 0.951 46 H 0.100 0.900 47 H 0.100 0.900 48 H 0.389 0.611 49 H -0.297 1.297 50 H -0.282 1.282 51 H 0.153 0.847 52 H 0.157 0.843 53 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.565 5.633 5.623 9.712 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 N -0.223 5.223 3 C -0.092 4.092 4 C 0.301 3.699 5 O -0.435 6.435 6 N -0.357 5.357 7 C 0.008 3.992 8 H 0.102 0.898 9 C -0.154 4.154 10 C -0.133 4.133 11 H 0.111 0.889 12 C -0.012 4.012 13 N -0.133 5.133 14 C -0.179 4.179 15 C -0.215 4.215 16 N -0.266 5.266 17 C -0.110 4.110 18 C -0.188 4.188 19 C 0.045 3.955 20 C -0.106 4.106 21 C -0.156 4.156 22 O -0.349 6.349 23 Si 0.654 3.346 24 C -0.078 4.078 25 C -0.188 4.188 26 C 0.455 3.545 27 F -0.159 7.159 28 F -0.158 7.158 29 F -0.163 7.163 30 C -0.071 4.071 31 C -0.163 4.163 32 H 0.064 0.936 33 H 0.092 0.908 34 H 0.086 0.914 35 H 0.118 0.882 36 H 0.133 0.867 37 H 0.251 0.749 38 H 0.133 0.867 39 H 0.110 0.890 40 H 0.129 0.871 41 H 0.133 0.867 42 H 0.220 0.780 43 H 0.189 0.811 44 H 0.235 0.765 45 H 0.068 0.932 46 H 0.119 0.881 47 H 0.118 0.882 48 H 0.238 0.762 49 H -0.225 1.225 50 H -0.208 1.208 51 H 0.170 0.830 52 H 0.175 0.825 53 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -4.545 4.898 3.423 7.507 hybrid contribution -0.237 1.085 1.303 1.712 sum -4.782 5.983 4.726 9.000 Atomic orbital electron populations 1.22474 0.83999 1.03191 1.01468 1.59088 1.09969 1.12525 1.40692 1.22147 1.03086 0.88667 0.95305 1.20771 0.78536 0.81676 0.88911 1.90727 1.40526 1.64606 1.47662 1.45560 1.57549 1.13116 1.19482 1.21811 0.97991 0.94392 0.84981 0.89783 1.23253 0.94635 0.93032 1.04512 1.22956 0.97735 0.94079 0.98575 0.88873 1.22242 0.75257 1.01506 1.02164 1.45755 1.08581 1.34344 1.24605 1.23163 0.88622 1.03950 1.02208 1.22648 0.99244 1.02152 0.97459 1.70240 1.17183 1.18883 1.20326 1.25341 0.87787 1.00878 0.96997 1.23594 0.98091 0.97085 1.00067 1.18883 0.94379 0.93195 0.89013 1.20245 0.99004 0.95583 0.95730 1.24829 0.96419 1.02838 0.91481 1.86589 1.42947 1.50179 1.55234 0.94493 0.75944 0.83430 0.80703 1.20779 0.97420 0.99175 0.90398 1.19955 1.06652 0.99743 0.92408 1.18337 0.75545 0.77940 0.82680 1.93176 1.91201 1.82288 1.49260 1.93235 1.86477 1.39480 1.96595 1.93231 1.30360 1.96370 1.96344 1.21146 0.92966 0.91696 1.01315 1.21892 1.01130 1.01768 0.91558 0.93573 0.90777 0.91398 0.88164 0.86651 0.74911 0.86653 0.88972 0.87120 0.86681 0.78026 0.81117 0.76471 0.93216 0.88117 0.88248 0.76167 1.22507 1.20841 0.82966 0.82499 0.82574 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.02 9.02 127.69 1.15 1.17 16 2 N -0.50 -0.11 3.71 -724.43 -2.69 -2.80 16 3 C 0.04 -0.16 5.03 85.56 0.43 0.27 16 4 C 0.51 0.16 7.52 87.66 0.66 0.82 16 5 O -0.56 -5.62 13.95 -3.03 -0.04 -5.66 16 6 N -0.70 4.06 5.26 -440.02 -2.32 1.75 16 7 C 0.11 -0.62 4.30 45.52 0.20 -0.42 16 8 H 0.08 -0.03 7.50 -2.38 -0.02 -0.05 16 9 C -0.12 1.40 7.38 31.12 0.23 1.63 16 10 C -0.11 1.17 3.85 -10.17 -0.04 1.13 16 11 H 0.09 -0.83 8.14 -2.39 -0.02 -0.85 16 12 C 0.11 -1.12 5.99 86.38 0.52 -0.60 16 13 N -0.45 1.09 2.75 -529.06 -1.46 -0.37 16 14 C -0.05 0.03 11.58 83.09 0.96 1.00 16 15 C -0.07 -0.40 11.87 83.52 0.99 0.59 16 16 N -0.55 -5.65 11.25 -200.30 -2.25 -7.90 16 17 C 0.17 0.53 12.56 180.26 2.26 2.80 16 18 C -0.15 0.83 7.45 31.22 0.23 1.06 16 19 C 0.14 -0.23 4.66 38.22 0.18 -0.05 16 20 C -0.10 0.08 5.27 -19.73 -0.10 -0.02 16 21 C -0.04 -0.07 2.34 71.24 0.17 0.10 16 22 O -0.54 -1.47 12.88 -148.98 -1.92 -3.39 16 23 Si 0.75 0.10 29.92 68.60 2.05 2.16 16 24 C -0.06 0.14 8.20 22.25 0.18 0.32 16 25 C -0.19 0.37 5.37 -19.84 -0.11 0.27 16 26 C 0.51 0.08 3.31 71.24 0.24 0.32 16 27 F -0.18 -0.12 15.97 44.97 0.72 0.59 16 28 F -0.18 -0.22 17.23 44.97 0.77 0.55 16 29 F -0.18 -0.44 17.24 44.97 0.78 0.34 16 30 C -0.05 0.25 9.42 22.25 0.21 0.46 16 31 C -0.14 0.80 8.66 22.40 0.19 0.99 16 32 H 0.05 -0.18 7.34 -2.39 -0.02 -0.20 16 33 H 0.07 0.38 5.82 -2.39 -0.01 0.36 16 34 H 0.07 0.17 8.14 -2.39 -0.02 0.15 16 35 H 0.10 -1.04 7.47 -2.39 -0.02 -1.06 16 36 H 0.12 -0.73 8.06 -2.39 -0.02 -0.75 16 37 H 0.41 -4.77 8.70 -92.71 -0.81 -5.58 16 38 H 0.12 -1.64 8.10 -2.39 -0.02 -1.66 16 39 H 0.09 -1.26 8.14 -2.39 -0.02 -1.28 16 40 H 0.11 -1.37 7.85 -2.39 -0.02 -1.39 16 41 H 0.12 -1.56 8.14 -2.39 -0.02 -1.58 16 42 H 0.20 -1.58 8.06 -2.91 -0.02 -1.61 16 43 H 0.17 0.52 8.06 -2.91 -0.02 0.49 16 44 H 0.22 -0.54 8.06 -2.91 -0.02 -0.56 16 45 H 0.05 0.00 8.14 -2.39 -0.02 -0.02 16 46 H 0.10 -0.69 7.91 -2.39 -0.02 -0.71 16 47 H 0.10 0.57 7.78 -2.39 -0.02 0.55 16 48 H 0.39 -2.32 8.70 -74.05 -0.64 -2.96 16 49 H -0.30 -2.44 7.11 99.48 0.71 -1.74 16 50 H -0.28 -1.33 7.11 99.48 0.71 -0.62 16 51 H 0.15 -0.82 5.14 -2.91 -0.01 -0.84 16 52 H 0.16 -1.22 7.15 -2.91 -0.02 -1.24 16 53 H 0.16 -1.58 7.14 -2.91 -0.02 -1.60 16 Total: 0.00 -29.43 447.73 1.77 -27.66 By element: Atomic # 1 Polarization: -24.33 SS G_CDS: -0.42 Total: -24.75 kcal Atomic # 6 Polarization: 3.27 SS G_CDS: 8.55 Total: 11.83 kcal Atomic # 7 Polarization: -0.61 SS G_CDS: -8.72 Total: -9.32 kcal Atomic # 8 Polarization: -7.09 SS G_CDS: -1.96 Total: -9.06 kcal Atomic # 9 Polarization: -0.78 SS G_CDS: 2.27 Total: 1.49 kcal Atomic # 14 Polarization: 0.10 SS G_CDS: 2.05 Total: 2.16 kcal Total: -29.43 1.77 -27.66 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_6406254.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.681 kcal (2) G-P(sol) polarization free energy of solvation -29.432 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.113 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.773 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.658 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.339 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds