Wall clock time and date at job start Tue Mar 9 2021 12:59:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86304 * 109.46712 * 2 1 4 4 C 1.50701 * 109.47271 * 240.00200 * 2 1 3 5 5 C 1.35447 * 125.56601 * 119.97019 * 4 2 1 6 6 C 1.39827 * 107.86656 * 180.02562 * 5 4 2 7 7 C 1.37874 * 107.08798 * 0.02562 * 6 5 4 8 8 C 1.46676 * 126.23694 * 179.97438 * 7 6 5 9 9 O 1.21698 * 119.99723 * 0.02562 * 8 7 6 10 10 N 1.34773 * 119.99879 * 180.02562 * 8 7 6 11 11 C 1.46506 * 119.99969 * 180.02562 * 10 8 7 12 12 H 1.08997 * 112.84605 * 25.05396 * 11 10 8 13 13 C 1.53782 * 113.61445 * 156.25077 * 11 10 8 14 14 C 1.53784 * 87.07767 * 89.11728 * 13 11 10 15 15 H 1.09003 * 113.61268 * 270.87846 * 14 13 11 16 16 C 1.52999 * 113.61090 * 140.06819 * 14 13 11 17 17 N 1.46500 * 109.46783 * 174.99664 * 16 14 13 18 18 C 1.36889 * 126.39634 * 269.70848 * 17 16 14 19 19 C 1.34671 * 106.81611 * 179.84475 * 18 17 16 20 20 N 1.34130 * 108.02112 * 0.42510 * 19 18 17 21 21 C 1.30503 * 109.25660 * 359.72835 * 20 19 18 22 22 C 1.53785 * 113.61303 * 253.85863 * 11 10 8 23 23 N 1.35536 * 125.56131 * 300.31991 * 4 2 1 24 24 H 0.96702 * 114.00437 * 299.99571 * 1 2 3 25 25 H 1.08994 * 109.47453 * 119.99722 * 2 1 3 26 26 H 1.48508 * 109.99874 * 299.99834 * 3 2 1 27 27 H 1.48496 * 110.00174 * 61.31748 * 3 2 1 28 28 H 1.08005 * 126.06489 * 0.07404 * 5 4 2 29 29 H 1.08010 * 126.46097 * 179.97438 * 6 5 4 30 30 H 0.97005 * 120.00161 * 359.71988 * 10 8 7 31 31 H 1.09004 * 113.61155 * 203.66071 * 13 11 10 32 32 H 1.08997 * 113.61383 * 334.48295 * 13 11 10 33 33 H 1.08997 * 109.47124 * 294.99252 * 16 14 13 34 34 H 1.08999 * 109.47368 * 54.99640 * 16 14 13 35 35 H 1.07998 * 126.59031 * 359.97438 * 18 17 16 36 36 H 1.07995 * 125.99037 * 180.11630 * 19 18 17 37 37 H 1.08002 * 125.65240 * 179.97438 * 21 20 19 38 38 H 1.09003 * 113.61400 * 25.43327 * 22 11 10 39 39 H 1.08998 * 113.61245 * 156.33176 * 22 11 10 40 40 H 0.96993 * 125.67846 * 0.02562 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7129 -0.1634 -2.1920 6 6 2.9562 -1.1454 -3.1572 7 6 2.3012 -2.2873 -2.7473 8 6 2.2771 -3.5734 -3.4523 9 8 2.8755 -3.7020 -4.5041 10 7 1.5922 -4.6125 -2.9351 11 6 1.5685 -5.8972 -3.6390 12 1 2.4344 -6.0418 -4.2851 13 6 1.2770 -7.0968 -2.7219 14 6 -0.2141 -6.8522 -3.0076 15 1 -0.6839 -6.1576 -2.3112 16 6 -1.0205 -8.1384 -3.1984 17 7 -2.4401 -7.8075 -3.3450 18 6 -3.3596 -7.7090 -2.3358 19 6 -4.5341 -7.3842 -2.9091 20 7 -4.3392 -7.2962 -4.2333 21 6 -3.0872 -7.5485 -4.5017 22 6 0.2275 -6.1966 -4.3297 23 7 1.6693 -1.9990 -1.5589 24 1 -0.3934 0.4416 0.7651 25 1 1.7923 -0.5137 0.8899 26 1 1.5613 2.4679 -1.2086 27 1 1.5877 2.4586 1.2242 28 1 3.0831 0.8511 -2.2097 29 1 3.5455 -1.0309 -4.0551 30 1 1.1186 -4.5112 -2.0947 31 1 1.6466 -8.0449 -3.1125 32 1 1.5569 -6.9294 -1.6819 33 1 -0.6736 -8.6554 -4.0931 34 1 -0.8856 -8.7840 -2.3305 35 1 -3.1777 -7.8605 -1.2821 36 1 -5.4701 -7.2275 -2.3937 37 1 -2.6424 -7.5503 -5.4858 38 1 -0.3405 -5.3024 -4.5865 39 1 0.3108 -6.8990 -5.1590 40 1 1.1279 -2.6157 -1.0419 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:55 Heat of formation + Delta-G solvation = 76.167799 kcal Electronic energy + Delta-G solvation = -23924.967282 eV Core-core repulsion = 20323.347722 eV Total energy + Delta-G solvation = -3601.619561 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 303.137 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -42.97855 -42.52738 -41.13612 -39.30987 -37.94272 -35.49288 -34.03887 -32.14630 -31.51754 -30.38317 -29.05921 -27.05312 -26.93066 -24.56507 -23.24472 -22.23161 -21.88760 -21.64152 -21.15582 -20.48353 -19.74105 -18.77530 -18.46887 -17.30100 -17.00967 -16.61876 -16.32467 -16.09357 -15.86145 -15.43144 -15.13324 -15.04864 -14.88545 -14.76011 -14.63962 -14.28958 -14.12273 -13.91212 -13.78799 -13.65954 -13.56118 -13.06232 -12.82894 -12.58097 -12.04227 -11.95504 -11.61911 -11.21529 -10.84287 -10.80397 -10.52371 -10.27921 -10.07476 -9.42831 -9.25817 -5.02547 0.32601 1.06456 1.13077 1.50906 1.54436 1.77803 1.83986 1.88376 2.08327 2.31893 2.33788 3.04891 3.07359 3.18041 3.41231 3.50171 3.64565 3.72965 3.78512 3.84090 3.92673 3.95998 4.03106 4.18732 4.26635 4.38312 4.38569 4.40815 4.55006 4.58911 4.67472 4.77590 4.81328 4.85233 4.98934 5.09022 5.30880 5.33562 5.60634 5.81547 5.83397 6.14394 6.19413 6.24585 6.35282 7.05219 7.19694 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.063 4.063 3 Si 0.714 3.286 4 C 0.071 3.929 5 C -0.197 4.197 6 C -0.094 4.094 7 C -0.054 4.054 8 C 0.595 3.405 9 O -0.520 6.520 10 N -0.717 5.717 11 C 0.124 3.876 12 H 0.111 0.889 13 C -0.136 4.136 14 C -0.129 4.129 15 H 0.095 0.905 16 C 0.114 3.886 17 N -0.458 5.458 18 C -0.060 4.060 19 C -0.029 4.029 20 N -0.496 5.496 21 C 0.184 3.816 22 C -0.147 4.147 23 N -0.525 5.525 24 H 0.385 0.615 25 H 0.078 0.922 26 H -0.249 1.249 27 H -0.259 1.259 28 H 0.153 0.847 29 H 0.155 0.845 30 H 0.394 0.606 31 H 0.103 0.897 32 H 0.078 0.922 33 H 0.098 0.902 34 H 0.094 0.906 35 H 0.172 0.828 36 H 0.169 0.831 37 H 0.202 0.798 38 H 0.075 0.925 39 H 0.097 0.903 40 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.920 -1.301 6.679 7.853 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.172 4.172 3 Si 0.612 3.388 4 C -0.047 4.047 5 C -0.221 4.221 6 C -0.120 4.120 7 C -0.167 4.167 8 C 0.383 3.617 9 O -0.395 6.395 10 N -0.368 5.368 11 C 0.018 3.982 12 H 0.129 0.871 13 C -0.174 4.174 14 C -0.149 4.149 15 H 0.113 0.887 16 C -0.009 4.009 17 N -0.141 5.141 18 C -0.193 4.193 19 C -0.177 4.177 20 N -0.214 5.214 21 C -0.098 4.098 22 C -0.186 4.186 23 N -0.121 5.121 24 H 0.234 0.766 25 H 0.096 0.904 26 H -0.173 1.173 27 H -0.184 1.184 28 H 0.170 0.830 29 H 0.173 0.827 30 H 0.228 0.772 31 H 0.122 0.878 32 H 0.097 0.903 33 H 0.116 0.884 34 H 0.113 0.887 35 H 0.189 0.811 36 H 0.186 0.814 37 H 0.219 0.781 38 H 0.094 0.906 39 H 0.115 0.885 40 H 0.252 0.748 Dipole moment (debyes) X Y Z Total from point charges 3.684 -0.865 4.835 6.140 hybrid contribution -1.134 -0.725 1.961 2.378 sum 2.551 -1.591 6.796 7.431 Atomic orbital electron populations 1.86569 1.17664 1.80539 1.50227 1.24618 0.84618 1.11940 0.96002 0.94347 0.91397 0.72336 0.80672 1.19876 1.02284 0.84533 0.97991 1.20658 1.05583 1.00612 0.95272 1.21325 1.00356 0.90368 0.99998 1.20378 1.08455 0.96700 0.91188 1.17027 0.78417 0.81878 0.84377 1.90878 1.44083 1.82662 1.21906 1.45547 1.53682 1.11426 1.26119 1.21784 0.99397 0.82188 0.94803 0.87149 1.23337 0.94257 0.98954 1.00876 1.23107 0.95284 0.96984 0.99485 0.88684 1.21956 0.77209 0.97165 1.04562 1.45584 1.09168 1.51738 1.07578 1.22738 0.90294 1.11484 0.94761 1.22356 0.98232 1.06678 0.90428 1.70329 1.15305 1.19947 1.15811 1.25020 0.88869 1.04154 0.91787 1.23590 0.96875 1.01623 0.96474 1.41893 1.39845 1.11349 1.18991 0.76616 0.90397 1.17324 1.18412 0.82976 0.82747 0.77207 0.87823 0.90290 0.88385 0.88744 0.81067 0.81421 0.78134 0.90613 0.88472 0.74786 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.32 12.86 -35.23 -0.45 -0.14 16 2 C -0.06 0.11 3.07 36.01 0.11 0.22 16 3 Si 0.71 -1.62 30.54 -169.99 -5.19 -6.81 16 4 C 0.07 0.01 6.51 -81.95 -0.53 -0.52 16 5 C -0.20 -0.12 9.32 -39.98 -0.37 -0.50 16 6 C -0.09 -0.19 10.65 -39.12 -0.42 -0.60 16 7 C -0.05 -0.09 7.06 -81.98 -0.58 -0.67 16 8 C 0.59 1.39 7.79 -12.86 -0.10 1.29 16 9 O -0.52 -3.11 16.50 5.19 0.09 -3.03 16 10 N -0.72 0.82 5.26 -54.32 -0.29 0.53 16 11 C 0.12 -0.23 4.30 -67.11 -0.29 -0.52 16 12 H 0.11 -0.03 7.49 -51.93 -0.39 -0.42 16 13 C -0.14 0.62 7.38 -25.92 -0.19 0.42 16 14 C -0.13 0.50 3.85 -89.67 -0.35 0.16 16 15 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16 16 C 0.11 -0.43 5.99 -4.04 -0.02 -0.46 16 17 N -0.46 0.22 2.75 -118.57 -0.33 -0.11 16 18 C -0.06 -0.02 11.58 -16.56 -0.19 -0.21 16 19 C -0.03 -0.08 11.87 -17.81 -0.21 -0.29 16 20 N -0.50 -2.33 11.25 -14.66 -0.16 -2.50 16 21 C 0.18 0.28 12.56 -90.37 -1.14 -0.85 16 22 C -0.15 0.35 7.45 -25.78 -0.19 0.16 16 23 N -0.52 0.17 5.99 -5.70 -0.03 0.14 16 24 H 0.39 -1.73 8.74 45.56 0.40 -1.33 16 25 H 0.08 -0.29 7.96 -51.93 -0.41 -0.71 16 26 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 27 H -0.26 0.11 7.11 56.52 0.40 0.52 16 28 H 0.15 -0.22 6.17 -52.48 -0.32 -0.55 16 29 H 0.15 0.23 8.06 -52.48 -0.42 -0.20 16 30 H 0.39 -1.36 7.83 -40.82 -0.32 -1.68 16 31 H 0.10 -0.58 8.10 -51.93 -0.42 -1.00 16 32 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 33 H 0.10 -0.49 7.85 -51.93 -0.41 -0.89 16 34 H 0.09 -0.46 8.14 -51.93 -0.42 -0.88 16 35 H 0.17 -0.43 8.06 -52.49 -0.42 -0.85 16 36 H 0.17 0.16 8.06 -52.49 -0.42 -0.27 16 37 H 0.20 -0.27 8.06 -52.49 -0.42 -0.69 16 38 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 39 H 0.10 -0.33 7.91 -51.93 -0.41 -0.74 16 40 H 0.41 -1.16 8.19 -40.82 -0.33 -1.49 16 LS Contribution 343.79 15.07 5.18 5.18 Total: 0.00 -11.26 343.79 -10.86 -22.12 By element: Atomic # 1 Polarization: -7.82 SS G_CDS: -5.20 Total: -13.02 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -4.47 Total: -2.38 kcal Atomic # 7 Polarization: -1.12 SS G_CDS: -0.81 Total: -1.93 kcal Atomic # 8 Polarization: -2.80 SS G_CDS: -0.37 Total: -3.17 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: -5.19 Total: -6.81 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -11.26 -10.86 -22.12 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 98.291 kcal (2) G-P(sol) polarization free energy of solvation -11.262 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 87.028 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.861 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.123 kcal (6) G-S(sol) free energy of system = (1) + (5) 76.168 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds