Wall clock time and date at job start Tue Mar 9 2021 13:00:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.36765 * 125.79714 * 2 1 4 4 C 1.47265 * 126.94637 * 0.02562 * 3 2 1 5 5 O 1.21620 * 119.99756 * 359.97438 * 4 3 2 6 6 N 1.34778 * 120.00217 * 180.02562 * 4 3 2 7 7 C 1.46493 * 119.99954 * 180.02562 * 6 4 3 8 8 H 1.09002 * 112.85041 * 334.66670 * 7 6 4 9 9 C 1.53778 * 113.61438 * 105.86508 * 7 6 4 10 10 C 1.54048 * 86.98654 * 89.16129 * 9 7 6 11 11 H 1.09001 * 113.61144 * 270.88099 * 10 9 7 12 12 C 1.52997 * 113.69569 * 139.99290 * 10 9 7 13 13 N 1.46500 * 109.47628 * 87.46387 * 12 10 9 14 14 C 1.36881 * 126.39747 * 269.71513 * 13 12 10 15 15 C 1.34667 * 106.81530 * 179.83795 * 14 13 12 16 16 N 1.34127 * 108.02224 * 0.42259 * 15 14 13 17 17 C 1.30496 * 109.25584 * 359.73022 * 16 15 14 18 18 C 1.53773 * 87.07725 * 25.43201 * 10 9 7 19 19 C 1.46693 * 106.11106 * 179.76562 * 3 2 1 20 20 C 1.34481 * 106.33645 * 0.39232 * 19 3 2 21 21 C 1.50699 * 125.57544 * 179.86662 * 20 19 3 22 22 O 1.42907 * 109.46603 * 64.72102 * 21 20 19 23 23 Si 1.86298 * 109.47032 * 184.71405 * 21 20 19 24 24 N 1.34654 * 125.80525 * 180.02562 * 2 1 3 25 25 H 1.09007 * 109.46798 * 269.97283 * 1 2 3 26 26 H 1.08993 * 109.47291 * 29.97588 * 1 2 3 27 27 H 1.09002 * 109.46918 * 149.98283 * 1 2 3 28 28 H 0.97002 * 119.99758 * 359.97438 * 6 4 3 29 29 H 1.09010 * 113.61169 * 203.66530 * 9 7 6 30 30 H 1.08996 * 113.61612 * 334.56112 * 9 7 6 31 31 H 1.09004 * 109.47374 * 207.46820 * 12 10 9 32 32 H 1.09005 * 109.46955 * 327.46178 * 12 10 9 33 33 H 1.08000 * 126.58900 * 359.97438 * 14 13 12 34 34 H 1.08007 * 125.98666 * 180.18590 * 15 14 13 35 35 H 1.08001 * 125.65249 * 179.97438 * 17 16 15 36 36 H 1.09008 * 113.61204 * 220.02102 * 18 10 9 37 37 H 1.09004 * 113.61707 * 89.12429 * 18 10 9 38 38 H 1.08005 * 126.83226 * 180.25453 * 19 3 2 39 39 H 1.08996 * 109.47117 * 304.72015 * 21 20 19 40 40 H 0.96697 * 114.00527 * 59.99993 * 22 21 20 41 41 H 1.48506 * 109.99834 * 58.68765 * 23 21 20 42 42 H 1.48502 * 110.00011 * 180.02562 * 23 21 20 43 43 H 0.97007 * 124.84953 * 0.02562 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3070 1.1093 0.0000 4 6 1.8701 2.5157 0.0005 5 8 0.6839 2.7839 0.0006 6 7 2.7849 3.5055 -0.0001 7 6 2.3502 4.9045 0.0010 8 1 1.3572 5.0395 -0.4276 9 6 2.5368 5.6064 1.3565 10 6 3.9480 5.9897 0.8719 11 1 4.7082 5.2454 1.1092 12 6 4.3661 7.4099 1.2579 13 7 4.9804 7.3937 2.5878 14 6 4.3337 7.5564 3.7832 15 6 5.2696 7.4685 4.7475 16 7 6.4567 7.2672 4.1566 17 6 6.2912 7.2212 2.8630 18 6 3.4011 5.8765 -0.5609 19 6 3.6882 0.6151 0.0058 20 6 3.6097 -0.7274 -0.0001 21 6 4.7821 -1.6742 -0.0002 22 8 5.5100 -1.5309 1.2212 23 14 4.1658 -3.4256 -0.1539 24 7 2.2948 -1.0921 -0.0005 25 1 -0.3633 -0.0005 1.0277 26 1 -0.3633 0.8901 -0.5134 27 1 -0.3633 -0.8899 -0.5141 28 1 3.7310 3.2915 -0.0005 29 1 1.8769 6.4622 1.4995 30 1 2.5358 4.9233 2.2058 31 1 5.0846 7.7876 0.5304 32 1 3.4884 8.0561 1.2709 33 1 3.2759 7.7212 3.9257 34 1 5.0954 7.5501 5.8103 35 1 7.0730 7.0707 2.1332 36 1 4.0975 5.4111 -1.2586 37 1 2.9772 6.8059 -0.9412 38 1 4.5890 1.2110 0.0112 39 1 5.4352 -1.4436 -0.8418 40 1 4.9898 -1.7210 2.0138 41 1 3.3800 -3.5795 -1.4046 42 1 5.3125 -4.3692 -0.1546 43 1 1.9735 -2.0074 -0.0013 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14688108_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:18 Heat of formation + Delta-G solvation = 69.712500 kcal Electronic energy + Delta-G solvation = -25960.698819 eV Core-core repulsion = 22203.261717 eV Total energy + Delta-G solvation = -3757.437103 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.89350 -42.54009 -41.01422 -39.13935 -37.84359 -35.31452 -33.86018 -32.85079 -32.02904 -30.33507 -29.12242 -28.74030 -26.89219 -25.82449 -24.47296 -23.25318 -22.14846 -21.80005 -21.64186 -20.71925 -20.29082 -18.77441 -18.40402 -17.78287 -17.09607 -16.98322 -16.67378 -16.36846 -16.01362 -15.79533 -15.39299 -15.16356 -14.93523 -14.86620 -14.65630 -14.54587 -14.40435 -14.17334 -14.14432 -13.94115 -13.73583 -13.59689 -13.44813 -12.86701 -12.76963 -12.63892 -12.44703 -12.30035 -11.77997 -11.47808 -10.88354 -10.77915 -10.56341 -10.41994 -10.07801 -9.86503 -9.34508 -9.19903 -5.36895 0.72491 0.97632 1.16684 1.21760 1.34826 1.69337 1.86805 1.92216 2.33293 2.39032 2.58739 3.21128 3.25055 3.33019 3.53819 3.57941 3.67012 3.77887 3.89204 3.91335 4.02197 4.05732 4.09314 4.14538 4.30104 4.30838 4.43903 4.52618 4.53711 4.62378 4.65265 4.69101 4.74911 4.82430 4.90411 4.91262 4.96547 5.03152 5.22123 5.40151 5.59672 5.66369 5.81526 5.91522 6.26783 6.32525 6.38740 6.62781 7.26682 7.41194 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C 0.126 3.874 3 C -0.243 4.243 4 C 0.597 3.403 5 O -0.546 6.546 6 N -0.711 5.711 7 C 0.125 3.875 8 H 0.106 0.894 9 C -0.146 4.146 10 C -0.129 4.129 11 H 0.097 0.903 12 C 0.113 3.887 13 N -0.457 5.457 14 C -0.053 4.053 15 C -0.032 4.032 16 N -0.496 5.496 17 C 0.178 3.822 18 C -0.137 4.137 19 C -0.128 4.128 20 C -0.028 4.028 21 C -0.033 4.033 22 O -0.534 6.534 23 Si 0.671 3.329 24 N -0.544 5.544 25 H 0.083 0.917 26 H 0.103 0.897 27 H 0.067 0.933 28 H 0.400 0.600 29 H 0.092 0.908 30 H 0.074 0.926 31 H 0.096 0.904 32 H 0.094 0.906 33 H 0.172 0.828 34 H 0.168 0.832 35 H 0.202 0.798 36 H 0.079 0.921 37 H 0.100 0.900 38 H 0.146 0.854 39 H 0.126 0.874 40 H 0.381 0.619 41 H -0.251 1.251 42 H -0.243 1.243 43 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.221 -2.281 -2.195 3.867 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.007 3.993 3 C -0.253 4.253 4 C 0.387 3.613 5 O -0.425 6.425 6 N -0.362 5.362 7 C 0.020 3.980 8 H 0.124 0.876 9 C -0.184 4.184 10 C -0.148 4.148 11 H 0.115 0.885 12 C -0.009 4.009 13 N -0.140 5.140 14 C -0.186 4.186 15 C -0.180 4.180 16 N -0.214 5.214 17 C -0.104 4.104 18 C -0.176 4.176 19 C -0.153 4.153 20 C -0.136 4.136 21 C -0.146 4.146 22 O -0.339 6.339 23 Si 0.572 3.428 24 N -0.144 5.144 25 H 0.101 0.899 26 H 0.122 0.878 27 H 0.086 0.914 28 H 0.235 0.765 29 H 0.110 0.890 30 H 0.093 0.907 31 H 0.114 0.886 32 H 0.113 0.887 33 H 0.189 0.811 34 H 0.185 0.815 35 H 0.219 0.781 36 H 0.098 0.902 37 H 0.118 0.882 38 H 0.163 0.837 39 H 0.143 0.857 40 H 0.228 0.772 41 H -0.176 1.176 42 H -0.167 1.167 43 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -1.887 -2.903 -2.814 4.462 hybrid contribution -0.073 0.079 -0.669 0.677 sum -1.960 -2.823 -3.483 4.893 Atomic orbital electron populations 1.20663 0.86490 1.04594 1.03964 1.20408 0.93804 0.85246 0.99831 1.20062 0.93069 0.91922 1.20203 1.17305 0.85180 0.83987 0.74823 1.90753 1.16560 1.84322 1.50828 1.45418 1.09754 1.04849 1.76166 1.21707 0.99376 0.80325 0.96630 0.87623 1.23558 0.95517 1.00997 0.98361 1.23099 0.98137 0.96299 0.97243 0.88456 1.21967 0.99654 0.97774 0.81529 1.45579 1.08353 1.52990 1.07034 1.22732 0.99786 1.11322 0.84757 1.22342 0.88482 1.07435 0.99698 1.70308 1.26877 1.19284 1.04892 1.25008 0.85146 1.05704 0.94536 1.23334 0.98376 1.00257 0.95599 1.21780 0.95619 0.92640 1.05243 1.20533 0.84384 0.95712 1.12983 1.24430 0.92609 1.06695 0.90821 1.86554 1.39643 1.92786 1.14876 0.95445 0.84846 0.75854 0.86655 1.41715 1.05546 1.08454 1.58683 0.89887 0.87807 0.91447 0.76492 0.88954 0.90728 0.88592 0.88723 0.81099 0.81459 0.78132 0.90216 0.88157 0.83679 0.85692 0.77175 1.17577 1.16685 0.74708 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.06 9.88 36.01 0.36 0.41 16 2 C 0.13 0.06 7.17 -81.89 -0.59 -0.52 16 3 C -0.24 -0.40 6.29 -103.35 -0.65 -1.05 16 4 C 0.60 1.62 7.81 -12.59 -0.10 1.52 16 5 O -0.55 -3.03 14.43 5.26 0.08 -2.95 16 6 N -0.71 0.09 5.26 -54.15 -0.28 -0.19 16 7 C 0.13 -0.13 4.30 -67.12 -0.29 -0.42 16 8 H 0.11 0.06 7.50 -51.93 -0.39 -0.33 16 9 C -0.15 0.25 7.45 -25.78 -0.19 0.06 16 10 C -0.13 0.41 3.85 -89.67 -0.35 0.06 16 11 H 0.10 -0.22 8.14 -51.93 -0.42 -0.64 16 12 C 0.11 -0.37 5.99 -4.04 -0.02 -0.39 16 13 N -0.46 0.05 2.75 -118.58 -0.33 -0.28 16 14 C -0.05 -0.05 11.58 -16.56 -0.19 -0.24 16 15 C -0.03 -0.10 11.87 -17.81 -0.21 -0.31 16 16 N -0.50 -2.37 11.25 -14.66 -0.16 -2.53 16 17 C 0.18 0.28 12.56 -90.38 -1.14 -0.85 16 18 C -0.14 0.50 7.38 -25.92 -0.19 0.31 16 19 C -0.13 -0.04 10.45 -37.50 -0.39 -0.43 16 20 C -0.03 0.02 6.09 -81.87 -0.50 -0.48 16 21 C -0.03 0.06 2.98 36.01 0.11 0.16 16 22 O -0.53 0.53 12.88 -35.23 -0.45 0.08 16 23 Si 0.67 -1.90 30.96 -169.99 -5.26 -7.17 16 24 N -0.54 0.83 5.41 -5.42 -0.03 0.80 16 25 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 26 H 0.10 0.15 6.46 -51.93 -0.34 -0.19 16 27 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 28 H 0.40 -0.74 7.83 -40.82 -0.32 -1.06 16 29 H 0.09 -0.23 7.91 -51.92 -0.41 -0.64 16 30 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 31 H 0.10 -0.44 8.14 -51.93 -0.42 -0.86 16 32 H 0.09 -0.39 7.85 -51.93 -0.41 -0.80 16 33 H 0.17 -0.27 8.06 -52.49 -0.42 -0.70 16 34 H 0.17 0.22 8.06 -52.48 -0.42 -0.20 16 35 H 0.20 -0.33 8.06 -52.49 -0.42 -0.75 16 36 H 0.08 -0.30 8.14 -51.92 -0.42 -0.72 16 37 H 0.10 -0.47 8.10 -51.93 -0.42 -0.89 16 38 H 0.15 -0.15 7.70 -52.48 -0.40 -0.55 16 39 H 0.13 -0.19 7.96 -51.93 -0.41 -0.60 16 40 H 0.38 -1.73 8.70 45.56 0.40 -1.33 16 41 H -0.25 0.15 7.11 56.52 0.40 0.55 16 42 H -0.24 -0.15 7.11 56.52 0.40 0.25 16 43 H 0.41 -1.72 6.72 -40.82 -0.27 -2.00 16 LS Contribution 362.57 15.07 5.46 5.46 Total: 0.00 -10.62 362.57 -11.31 -21.92 By element: Atomic # 1 Polarization: -6.99 SS G_CDS: -5.98 Total: -12.98 kcal Atomic # 6 Polarization: 2.17 SS G_CDS: -4.34 Total: -2.17 kcal Atomic # 7 Polarization: -1.40 SS G_CDS: -0.81 Total: -2.20 kcal Atomic # 8 Polarization: -2.50 SS G_CDS: -0.38 Total: -2.87 kcal Atomic # 14 Polarization: -1.90 SS G_CDS: -5.26 Total: -7.17 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -10.62 -11.31 -21.92 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14688108_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 91.636 kcal (2) G-P(sol) polarization free energy of solvation -10.617 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 81.019 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.307 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.923 kcal (6) G-S(sol) free energy of system = (1) + (5) 69.712 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds