Wall clock time and date at job start Tue Mar 9 2021 13:00:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.35459 * 125.56138 * 2 1 4 4 C 1.50704 * 126.06678 * 359.97438 * 3 2 1 5 5 O 1.42900 * 109.46652 * 149.97869 * 4 3 2 6 6 Si 1.86301 * 109.47054 * 29.98212 * 4 3 2 7 7 C 1.39831 * 107.86475 * 179.70674 * 3 2 1 8 8 C 1.50698 * 126.45926 * 180.29888 * 7 3 2 9 9 C 1.37879 * 107.08578 * 0.41730 * 7 3 2 10 10 C 1.46671 * 126.23541 * 179.85345 * 9 7 3 11 11 O 1.21697 * 120.00139 * 359.71031 * 10 9 7 12 12 N 1.34772 * 120.00502 * 179.71321 * 10 9 7 13 13 C 1.46497 * 120.00575 * 180.02562 * 12 10 9 14 14 H 1.08999 * 112.84695 * 336.18791 * 13 12 10 15 15 C 1.53778 * 113.61777 * 107.50215 * 13 12 10 16 16 C 1.53780 * 87.08287 * 139.98162 * 15 13 12 17 17 H 1.08997 * 113.69148 * 89.12394 * 16 15 13 18 18 C 1.50704 * 113.61457 * 220.01962 * 16 15 13 19 19 N 1.30494 * 125.64842 * 192.18767 * 18 16 15 20 20 C 1.34126 * 109.25549 * 180.26194 * 19 18 16 21 21 C 1.34666 * 108.02240 * 0.02562 * 20 19 18 22 22 N 1.35044 * 125.64872 * 12.49296 * 18 16 15 23 23 C 1.53786 * 113.61305 * 205.00190 * 13 12 10 24 24 N 1.35528 * 125.56984 * 179.97438 * 2 1 3 25 25 H 1.08994 * 109.46753 * 270.01734 * 1 2 3 26 26 H 1.09000 * 109.47224 * 30.01648 * 1 2 3 27 27 H 1.09000 * 109.46907 * 150.01993 * 1 2 3 28 28 H 1.08994 * 109.47386 * 269.97751 * 4 3 2 29 29 H 0.96705 * 113.99763 * 299.99827 * 5 4 3 30 30 H 1.48499 * 110.00067 * 58.67471 * 6 4 3 31 31 H 1.48496 * 109.99865 * 180.02562 * 6 4 3 32 32 H 1.09002 * 109.47524 * 270.16079 * 8 7 3 33 33 H 1.09003 * 109.46939 * 30.16335 * 8 7 3 34 34 H 1.09001 * 109.47058 * 150.15858 * 8 7 3 35 35 H 0.97000 * 119.99795 * 359.97438 * 12 10 9 36 36 H 1.09000 * 113.61535 * 25.43098 * 15 13 12 37 37 H 1.09005 * 113.61327 * 254.53014 * 15 13 12 38 38 H 1.07999 * 125.99346 * 179.97438 * 20 19 18 39 39 H 1.08000 * 126.59672 * 180.02562 * 21 20 19 40 40 H 0.97000 * 126.39445 * 359.75516 * 22 18 16 41 41 H 1.08996 * 113.61462 * 105.47050 * 23 13 12 42 42 H 1.09000 * 113.61120 * 334.55919 * 23 13 12 43 43 H 0.97004 * 125.67422 * 0.04633 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1019 0.0000 4 6 1.8198 2.5322 -0.0005 5 8 2.7766 3.3520 0.6737 6 14 0.1799 2.6422 0.8766 7 6 3.6269 0.6769 0.0068 8 6 4.8485 1.5594 0.0156 9 6 3.6123 -0.7018 0.0013 10 6 4.7860 -1.5813 0.0022 11 8 5.9050 -1.1028 0.0031 12 7 4.6255 -2.9194 0.0021 13 6 5.7979 -3.7979 0.0037 14 1 6.6881 -3.3163 -0.4008 15 6 6.0351 -4.5064 1.3478 16 6 6.4065 -5.7569 0.5335 17 1 7.4638 -5.8128 0.2745 18 6 5.8799 -7.0398 1.1234 19 7 6.2336 -8.2435 0.7645 20 6 5.5586 -9.1404 1.4986 21 6 4.7556 -8.4668 2.3443 22 7 4.9595 -7.1342 2.1071 23 6 5.5258 -5.1893 -0.5921 24 7 2.2954 -1.1024 0.0005 25 1 -0.3632 0.0003 1.0276 26 1 -0.3634 0.8898 -0.5141 27 1 -0.3633 -0.8902 -0.5135 28 1 1.7060 2.8769 -1.0283 29 1 2.9285 3.1021 1.5954 30 1 0.3145 2.1451 2.2694 31 1 -0.2997 4.0476 0.8824 32 1 5.1473 1.7766 -1.0099 33 1 4.6197 2.4914 0.5325 34 1 5.6620 1.0485 0.5306 35 1 3.7337 -3.3009 0.0018 36 1 5.1304 -4.6262 1.9438 37 1 6.8673 -4.0935 1.9180 38 1 5.6434 -10.2144 1.4240 39 1 4.0813 -8.8956 3.0708 40 1 4.5237 -6.3956 2.5604 41 1 5.9468 -5.3279 -1.5879 42 1 4.4818 -5.4959 -0.5264 43 1 1.9835 -2.0209 0.0003 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14772358_12297754.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:38 Heat of formation + Delta-G solvation = 57.980927 kcal Electronic energy + Delta-G solvation = -26175.534625 eV Core-core repulsion = 22417.588803 eV Total energy + Delta-G solvation = -3757.945822 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.153 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -43.12998 -42.66698 -40.84413 -39.15850 -37.91829 -34.94452 -33.65189 -33.48499 -32.96192 -30.62707 -29.30342 -27.77615 -26.86142 -26.57372 -25.52028 -22.89452 -22.46628 -21.64669 -21.07370 -20.72539 -20.25530 -19.28039 -19.02052 -17.63725 -17.18333 -16.75704 -16.56136 -16.47099 -15.94823 -15.82507 -15.74688 -15.11865 -14.90499 -14.87130 -14.62138 -14.33677 -14.10277 -13.99396 -13.88463 -13.71465 -13.60137 -13.50099 -13.26904 -13.11106 -12.61769 -12.46049 -12.32879 -12.06998 -11.82340 -11.76438 -11.17550 -11.05262 -11.04210 -10.52379 -10.25613 -9.54465 -9.37142 -8.96993 -4.76810 0.34655 1.06728 1.23115 1.67171 1.69851 1.90529 2.06597 2.08976 2.12266 2.22072 2.24467 3.25209 3.34214 3.42295 3.56284 3.71349 3.81489 3.84138 3.95181 3.98436 4.21737 4.22720 4.47750 4.51447 4.52331 4.56322 4.61165 4.66980 4.68427 4.74851 4.79460 4.81166 4.84126 4.89370 4.93572 5.02506 5.12186 5.14994 5.24816 5.33337 5.41825 5.70179 5.76993 5.83214 6.37032 6.46255 6.51214 6.59673 7.07706 7.11983 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C 0.087 3.913 3 C -0.233 4.233 4 C -0.052 4.052 5 O -0.549 6.549 6 Si 0.760 3.240 7 C -0.070 4.070 8 C -0.094 4.094 9 C -0.082 4.082 10 C 0.589 3.411 11 O -0.565 6.565 12 N -0.705 5.705 13 C 0.127 3.873 14 H 0.107 0.893 15 C -0.139 4.139 16 C -0.023 4.023 17 H 0.118 0.882 18 C 0.213 3.787 19 N -0.533 5.533 20 C -0.064 4.064 21 C -0.041 4.041 22 N -0.555 5.555 23 C -0.119 4.119 24 N -0.516 5.516 25 H 0.102 0.898 26 H 0.117 0.883 27 H 0.117 0.883 28 H 0.113 0.887 29 H 0.381 0.619 30 H -0.290 1.290 31 H -0.306 1.306 32 H 0.052 0.948 33 H 0.083 0.917 34 H 0.057 0.943 35 H 0.410 0.590 36 H 0.098 0.902 37 H 0.080 0.920 38 H 0.177 0.823 39 H 0.211 0.789 40 H 0.431 0.569 41 H 0.086 0.914 42 H 0.100 0.900 43 H 0.434 0.566 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.445 -4.041 1.677 11.324 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C -0.033 4.033 3 C -0.239 4.239 4 C -0.161 4.161 5 O -0.356 6.356 6 Si 0.665 3.335 7 C -0.079 4.079 8 C -0.151 4.151 9 C -0.194 4.194 10 C 0.379 3.621 11 O -0.444 6.444 12 N -0.356 5.356 13 C 0.022 3.978 14 H 0.125 0.875 15 C -0.178 4.178 16 C -0.044 4.044 17 H 0.136 0.864 18 C -0.052 4.052 19 N -0.253 5.253 20 C -0.211 4.211 21 C -0.176 4.176 22 N -0.160 5.160 23 C -0.159 4.159 24 N -0.115 5.115 25 H 0.120 0.880 26 H 0.134 0.866 27 H 0.136 0.864 28 H 0.130 0.870 29 H 0.230 0.770 30 H -0.217 1.217 31 H -0.235 1.235 32 H 0.071 0.929 33 H 0.102 0.898 34 H 0.076 0.924 35 H 0.247 0.753 36 H 0.117 0.883 37 H 0.098 0.902 38 H 0.194 0.806 39 H 0.227 0.773 40 H 0.272 0.728 41 H 0.105 0.895 42 H 0.118 0.882 43 H 0.275 0.725 Dipole moment (debyes) X Y Z Total from point charges -9.468 -3.550 1.143 10.176 hybrid contribution 0.379 0.012 1.523 1.569 sum -9.090 -3.537 2.666 10.111 Atomic orbital electron populations 1.20709 0.84499 1.05676 1.05692 1.20683 0.95041 0.84851 1.02751 1.19652 0.92570 0.95740 1.15984 1.24640 1.02026 0.86650 1.02751 1.86519 1.61910 1.57729 1.29477 0.94460 0.79079 0.79940 0.80003 1.19930 0.95334 0.91535 1.01105 1.20421 0.94146 0.98871 1.01625 1.19914 0.83844 0.93644 1.21996 1.17218 0.87173 0.82212 0.75509 1.90829 1.25848 1.75824 1.51948 1.45646 1.10210 1.04594 1.75154 1.22399 0.89756 0.88738 0.96882 0.87521 1.23533 1.03050 0.93976 0.97273 1.20763 1.01020 0.85724 0.96888 0.86375 1.23076 0.94067 0.95397 0.92652 1.70180 1.27261 0.99703 1.28172 1.22752 0.99629 1.00395 0.98291 1.23285 1.06063 0.82724 1.05484 1.43235 1.33596 1.08835 1.30375 1.23363 1.01089 0.92454 0.98957 1.41667 1.03938 1.09251 1.56635 0.87970 0.86573 0.86442 0.86975 0.77020 1.21691 1.23513 0.92891 0.89822 0.92408 0.75328 0.88319 0.90155 0.80607 0.77271 0.72798 0.89511 0.88190 0.72526 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 1.59 8.21 71.24 0.59 2.18 16 2 C 0.09 -0.50 6.84 41.35 0.28 -0.21 16 3 C -0.23 -0.23 5.38 -20.12 -0.11 -0.33 16 4 C -0.05 -0.03 3.03 71.24 0.22 0.19 16 5 O -0.55 -2.58 10.20 -148.98 -1.52 -4.10 16 6 Si 0.76 -2.39 26.76 68.60 1.84 -0.55 16 7 C -0.07 -0.42 6.15 -19.56 -0.12 -0.54 16 8 C -0.09 -0.84 9.51 71.24 0.68 -0.16 16 9 C -0.08 -0.19 7.06 40.35 0.28 0.10 16 10 C 0.59 2.50 7.79 86.45 0.67 3.17 16 11 O -0.57 -7.37 14.40 -4.34 -0.06 -7.43 16 12 N -0.71 3.04 5.35 -444.01 -2.38 0.66 16 13 C 0.13 -0.44 4.24 45.52 0.19 -0.25 16 14 H 0.11 0.13 7.46 -2.39 -0.02 0.11 16 15 C -0.14 0.76 7.35 31.12 0.23 0.99 16 16 C -0.02 0.06 4.29 -11.01 -0.05 0.02 16 17 H 0.12 -0.14 8.14 -2.39 -0.02 -0.16 16 18 C 0.21 0.33 7.36 138.13 1.02 1.35 16 19 N -0.53 -4.41 11.25 -188.13 -2.12 -6.53 16 20 C -0.06 -0.25 11.87 83.52 0.99 0.74 16 21 C -0.04 0.11 12.04 83.09 1.00 1.11 16 22 N -0.56 2.23 5.94 -186.27 -1.11 1.12 16 23 C -0.12 0.65 7.38 31.12 0.23 0.88 16 24 N -0.52 3.37 5.99 -171.93 -1.03 2.34 16 25 H 0.10 -1.62 7.13 -2.39 -0.02 -1.64 16 26 H 0.12 -1.92 5.17 -2.39 -0.01 -1.93 16 27 H 0.12 -2.27 8.14 -2.39 -0.02 -2.28 16 28 H 0.11 -0.02 7.96 -2.39 -0.02 -0.04 16 29 H 0.38 0.08 8.46 -74.05 -0.63 -0.54 16 30 H -0.29 -0.47 7.11 99.48 0.71 0.23 16 31 H -0.31 -1.66 7.11 99.48 0.71 -0.95 16 32 H 0.05 0.56 8.14 -2.39 -0.02 0.54 16 33 H 0.08 0.63 5.46 -2.39 -0.01 0.61 16 34 H 0.06 0.70 6.49 -2.39 -0.02 0.68 16 35 H 0.41 -4.66 7.86 -92.71 -0.73 -5.39 16 36 H 0.10 -0.94 6.64 -2.39 -0.02 -0.96 16 37 H 0.08 -0.27 8.14 -2.38 -0.02 -0.29 16 38 H 0.18 0.13 8.06 -2.91 -0.02 0.11 16 39 H 0.21 -2.10 8.06 -2.91 -0.02 -2.12 16 40 H 0.43 -4.54 7.53 -92.71 -0.70 -5.23 16 41 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 42 H 0.10 -0.80 8.07 -2.39 -0.02 -0.82 16 43 H 0.43 -6.30 8.19 -92.71 -0.76 -7.06 16 Total: 0.00 -30.86 345.86 -1.94 -32.81 By element: Atomic # 1 Polarization: -25.84 SS G_CDS: -1.67 Total: -27.52 kcal Atomic # 6 Polarization: 3.10 SS G_CDS: 6.10 Total: 9.20 kcal Atomic # 7 Polarization: 4.22 SS G_CDS: -6.63 Total: -2.41 kcal Atomic # 8 Polarization: -9.95 SS G_CDS: -1.58 Total: -11.53 kcal Atomic # 14 Polarization: -2.39 SS G_CDS: 1.84 Total: -0.55 kcal Total: -30.86 -1.94 -32.81 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14772358_12297754.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 90.787 kcal (2) G-P(sol) polarization free energy of solvation -30.862 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.925 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.944 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.806 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.981 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds